RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 CD40P25942 277 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 ATP6AP1Q15904 470 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 RAB6CQ53S08 254 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 ZSCAN10Q96SZ4 725 aaPredicted RBP5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 DDA1Q9BW61 102 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 TPSD1Q9BZJ3 242 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 MFSD1Q9H3U5 465 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 PLEKHA2Q9HB19 425 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 ACSS2Q9NR19 701 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 MEIKINA0A087WXM9 373 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 EEF1E1O43324 174 aaKnown RBP5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR7C1O76099 320 aaPredicted RBP5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 LSM8O95777 96 aaKnown RBP5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 DBHP09172 617 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 HSD17B1P14061 328 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 AOC1P19801 751 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 PLGLAQ15195 96 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 SFT2D3Q587I9 215 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 CAPN13Q6MZZ7 669 aaPredicted RBP5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 Q6ZTK2 550 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 OVCH1Q7RTY7 1134 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 ZNF429Q86V71 674 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 NPEPL1Q8NDH3 523 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR4M1Q8NGD0 313 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR51A2Q8NGJ7 313 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 VN1R17PQ8TDU5 208 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 GMPPAQ96IJ6 420 aaPredicted RBP5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 SYT11Q9BT88 431 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 SUV39H2Q9H5I1 410 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 DMRT3Q9NQL9 472 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR5AC2Q9NZP5 309 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 VPS29Q9UBQ0 182 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 UBIAD1Q9Y5Z9 338 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 A0A0U1RQJ8 604 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 NDUFB10O96000 172 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 BMP2P12643 396 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 SSBP1Q04837 148 aaKnown RBP5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 CRHR2Q13324 411 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 TMEM270Q6UE05 265 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 ZNF680Q8NEM1 530 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 TMEM176AQ96HP8 235 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 CUTCQ9NTM9 273 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 ST6GALNAC2Q9UJ37 374 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 TBX21Q9UL17 535 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 ATRNO75882 1429 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 MELTFP08582 738 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 SLC10A3P09131 477 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 VIPR1P32241 457 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 RABIFP47224 123 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 GP2P55259 537 aaKnown RBP5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 FUT2Q10981 343 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 SLAMF1Q13291 335 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 VHLLQ6RSH7 139 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR13C8Q8NGS7 320 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 DTD2Q96FN9 168 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 MMP19Q99542 508 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 TEX101Q9BY14 249 aa5.65□□□□□ -1.5
CDC42BPA-201ENST00000334218 ZNF487B1APH4 448 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 KDM4EB2RXH2 506 aaPredicted RBP5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 ATXN1LP0C7T5 689 aaKnown RBP5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 HIST1H1EP10412 219 aaKnown RBP5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 TMEM35AQ53FP2 167 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 ZNF789Q5FWF6 425 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 DMRTA1Q5VZB9 504 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 OR10A7Q8NGE5 316 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 STARD4Q96DR4 205 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 TDP1Q9NUW8 608 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 OR12D3Q9UGF7 316 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 RASD1Q9Y272 281 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 CLCA3PQ9Y6N3 262 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 MBLAC1A4D2B0 266 aaPredicted RBP5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 FZD7O75084 574 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 MMP1P03956 469 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 GBAP04062 536 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 RNF144AP50876 292 aaPredicted RBP5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 ANTXR2P58335 489 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 TGFBR3Q03167 851 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 CHST13Q8NET6 341 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 OR4S2Q8NH73 311 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 KIAA1191Q96A73 305 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 DERL1Q9BUN8 251 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 TINAGL1Q9GZM7 467 aaPredicted RBP5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 EVA1AQ9H8M9 152 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 MRPS2Q9Y399 296 aaKnown RBP5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 NRKQ7Z2Y5 1582 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 PPLO60437 1756 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 ANTXRLA6NF34 631 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 IGKV5-2P06315 115 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 FUT1P19526 365 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 PRDX3P30048 256 aaKnown RBP5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 CBX2Q14781 532 aaPredicted RBP5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 OR1S1Q8NH92 325 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 RNF133Q8WVZ7 376 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 SLC35B4Q969S0 331 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 FBXL20Q96IG2 436 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 SERINC1Q9NRX5 453 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 RNF19AQ9NV58 838 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 MTCH1Q9NZJ7 389 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 EGFL7Q9UHF1 273 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 ITGB1BP1O14713 200 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms