RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 WDR13Q9H1Z4 485 aa13.17□□□□□ -0.3
SNX20-202ENST00000330943 POFUT1Q9H488 388 aa13.17□□□□□ -0.3
SNX20-202ENST00000330943 BARX1Q9HBU1 254 aaPredicted RBP13.17□□□□□ -0.3
SNX20-202ENST00000330943 RXFP3Q9NSD7 469 aa13.17□□□□□ -0.3
SNX20-202ENST00000330943 FRRS1LQ9P0K9 344 aa13.17□□□□□ -0.3
SNX20-202ENST00000330943 CDV3Q9UKY7 258 aaKnown RBP13.17□□□□□ -0.3
SNX20-202ENST00000330943 KLHDC2Q9Y2U9 406 aa13.17□□□□□ -0.3
SNX20-202ENST00000330943 P2RX6O15547 441 aa13.17□□□□□ -0.3
SNX20-202ENST00000330943 B3GALT2O43825 422 aa13.17□□□□□ -0.3
SNX20-202ENST00000330943 CEBPBP17676 345 aa13.17□□□□□ -0.3
SNX20-202ENST00000330943 ACAA2P42765 397 aaKnown RBP13.17□□□□□ -0.3
SNX20-202ENST00000330943 ALKBH1Q13686 389 aaKnown RBP13.17□□□□□ -0.3
SNX20-202ENST00000330943 KCNAB1Q14722 419 aa13.17□□□□□ -0.3
SNX20-202ENST00000330943 KIRREL2Q6UWL6 708 aa13.17□□□□□ -0.3
SNX20-202ENST00000330943 TMED4Q7Z7H5 227 aa13.17□□□□□ -0.3
SNX20-202ENST00000330943 BEST3Q8N1M1 668 aa13.17□□□□□ -0.3
SNX20-202ENST00000330943 SLC43A2Q8N370 569 aa13.17□□□□□ -0.3
SNX20-202ENST00000330943 OR51D1Q8NGF3 324 aa13.17□□□□□ -0.3
SNX20-202ENST00000330943 SUSD6Q92537 303 aa13.17□□□□□ -0.3
SNX20-202ENST00000330943 FGF13Q92913 245 aa13.17□□□□□ -0.3
SNX20-202ENST00000330943 STACQ99469 402 aa13.17□□□□□ -0.3
SNX20-202ENST00000330943 ALG12Q9BV10 488 aa13.17□□□□□ -0.3
SNX20-202ENST00000330943 TRIM2Q9C040 744 aa13.17□□□□□ -0.3
SNX20-202ENST00000330943 DNTTIP1Q9H147 329 aa13.17□□□□□ -0.3
SNX20-202ENST00000330943 MKKSQ9NPJ1 570 aaPredicted RBP13.17□□□□□ -0.3
SNX20-202ENST00000330943 ATPIF1Q9UII2 106 aa13.17□□□□□ -0.3
SNX20-202ENST00000330943 KLF2Q9Y5W3 355 aaPredicted RBP13.17□□□□□ -0.3
SNX20-202ENST00000330943 H7C2Y5 167 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 FGF17O60258 216 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 ZNF254O75437 659 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 CT62P0C5K7 136 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 B2MP61769 119 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 HYAL4Q2M3T9 481 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 BEX5Q5H9J7 111 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 SLC35D3Q5M8T2 416 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 LEG1Q6P5S2 330 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 TMEM88Q6PEY1 159 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 OR10AC1Q8NH08 325 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 ZNF75AQ96N20 296 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 SERINC2Q96SA4 455 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 DNAJB12Q9NXW2 375 aaKnown RBP13.16□□□□□ -0.3
SNX20-202ENST00000330943 SLC39A1Q9NY26 324 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 DEC1Q9P2X7 70 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 MLXQ9UH92 298 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 ZNF337Q9Y3M9 751 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 EIF4E2O60573 245 aaKnown RBP13.16□□□□□ -0.3
SNX20-202ENST00000330943 CTAG2O75638 210 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 FGF19O95750 216 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 CNR1P21554 472 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 CTNNB1P35222 781 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 RPS15AP62244 130 aaKnown RBP13.16□□□□□ -0.3
SNX20-202ENST00000330943 EIF2B5Q13144 721 aaKnown RBP13.16□□□□□ -0.3
SNX20-202ENST00000330943 LRRC37A5PQ49AS3 106 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 LY6G6FQ5SQ64 297 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 ZNF684Q5T5D7 378 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 SLC6A19Q695T7 634 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 RAB7BQ96AH8 199 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 HDAC8Q9BY41 377 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 ACTR10Q9NZ32 417 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 STEAP1Q9UHE8 339 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 MRM2Q9UI43 246 aaKnown RBP13.16□□□□□ -0.3
SNX20-202ENST00000330943 IKZF2Q9UKS7 526 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 COL6A3P12111 3177 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 KANTRA0A1W2PQU2 76 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 OTOL1A6NHN0 477 aaPredicted RBP13.16□□□□□ -0.3
SNX20-202ENST00000330943 GPR31O00270 319 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 GLCEO94923 617 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 TACSTD2P09758 323 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 ANKRD16Q6P6B7 361 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 DPY19L2P2Q6ZN68 376 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 MOB3CQ70IA8 216 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 ETFBKMTQ8IXQ9 262 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 C12orf45Q8N5I9 185 aaPredicted RBP13.16□□□□□ -0.3
SNX20-202ENST00000330943 TMEM52Q8NDY8 209 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 OR51A4Q8NGJ6 313 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 LCN9Q8WX39 176 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 TMEM106AQ96A25 262 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 CCDC74AQ96AQ1 378 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 ADAD1Q96M93 576 aaKnown RBP13.16□□□□□ -0.3
SNX20-202ENST00000330943 TIMM29Q9BSF4 260 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 ZNF471Q9BX82 626 aaPredicted RBP13.16□□□□□ -0.3
SNX20-202ENST00000330943 NMNAT2Q9BZQ4 307 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 PHPT1Q9NRX4 125 aaPredicted RBP13.16□□□□□ -0.3
SNX20-202ENST00000330943 SLC22A7Q9Y694 548 aa13.16□□□□□ -0.3
SNX20-202ENST00000330943 DISC1C4P0D8 188 aa13.15□□□□□ -0.3
SNX20-202ENST00000330943 UPK3AO75631 287 aa13.15□□□□□ -0.3
SNX20-202ENST00000330943 FBXO45P0C2W1 286 aa13.15□□□□□ -0.3
SNX20-202ENST00000330943 OR4E1P0C645 316 aa13.15□□□□□ -0.3
SNX20-202ENST00000330943 MAOBP27338 520 aa13.15□□□□□ -0.3
SNX20-202ENST00000330943 DRD3P35462 400 aa13.15□□□□□ -0.3
SNX20-202ENST00000330943 ATXN7L3Q14CW9 347 aaPredicted RBP13.15□□□□□ -0.3
SNX20-202ENST00000330943 EXOSC6Q5RKV6 272 aaKnown RBP13.15□□□□□ -0.3
SNX20-202ENST00000330943 LINC01590Q5TEZ4 76 aa13.15□□□□□ -0.3
SNX20-202ENST00000330943 NKAIN2Q5VXU1 208 aa13.15□□□□□ -0.3
SNX20-202ENST00000330943 STEAP1BQ6NZ63 245 aa13.15□□□□□ -0.3
SNX20-202ENST00000330943 ZNF676Q8N7Q3 588 aa13.15□□□□□ -0.3
SNX20-202ENST00000330943 STEAP2Q8NFT2 490 aa13.15□□□□□ -0.3
SNX20-202ENST00000330943 TSNAXQ99598 290 aaKnown RBP13.15□□□□□ -0.3
SNX20-202ENST00000330943 NKX3-1Q99801 234 aaPredicted RBP13.15□□□□□ -0.3
SNX20-202ENST00000330943 ULBP3Q9BZM4 244 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms