RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 CHRFAM7AQ494W8 412 aa11.76□□□□□ -0.53
GTF3C6-201ENST00000329970 ENTPD8Q5MY95 495 aa11.76□□□□□ -0.53
GTF3C6-201ENST00000329970 CXXC5Q7LFL8 322 aaKnown RBP11.76□□□□□ -0.53
GTF3C6-201ENST00000329970 MDP1Q86V88 176 aa11.76□□□□□ -0.53
GTF3C6-201ENST00000329970 RNF217Q8TC41 542 aa11.76□□□□□ -0.53
GTF3C6-201ENST00000329970 ADAMTS16Q8TE57 1224 aa11.76□□□□□ -0.53
GTF3C6-201ENST00000329970 PIMREGQ9BSJ6 248 aa11.76□□□□□ -0.53
GTF3C6-201ENST00000329970 POLR2J2Q9GZM3 115 aaKnown RBP11.76□□□□□ -0.53
GTF3C6-201ENST00000329970 POLR2J3Q9H1A7 115 aaKnown RBP11.76□□□□□ -0.53
GTF3C6-201ENST00000329970 NPHS2Q9NP85 383 aa11.76□□□□□ -0.53
GTF3C6-201ENST00000329970 MED29Q9NX70 200 aa11.76□□□□□ -0.53
GTF3C6-201ENST00000329970 CDC42EP3Q9UKI2 254 aa11.76□□□□□ -0.53
GTF3C6-201ENST00000329970 FBXL3Q9UKT7 428 aa11.76□□□□□ -0.53
GTF3C6-201ENST00000329970 TRAPPC13A5PLN9 417 aa11.75□□□□□ -0.53
GTF3C6-201ENST00000329970 ZNF726A6NNF4 738 aa11.75□□□□□ -0.53
GTF3C6-201ENST00000329970 ENTPD5O75356 428 aa11.75□□□□□ -0.53
GTF3C6-201ENST00000329970 OPN1SWP03999 348 aa11.75□□□□□ -0.53
GTF3C6-201ENST00000329970 THY1P04216 161 aa11.75□□□□□ -0.53
GTF3C6-201ENST00000329970 IGHV4-31P0DP07 118 aa11.75□□□□□ -0.53
GTF3C6-201ENST00000329970 ZNF14P17017 642 aaPredicted RBP11.75□□□□□ -0.53
GTF3C6-201ENST00000329970 NPR2P20594 1047 aa11.75□□□□□ -0.53
GTF3C6-201ENST00000329970 NR4A2P43354 598 aa11.75□□□□□ -0.53
GTF3C6-201ENST00000329970 EVX1P49640 407 aa11.75□□□□□ -0.53
GTF3C6-201ENST00000329970 GZMKP49863 264 aa11.75□□□□□ -0.53
GTF3C6-201ENST00000329970 LSM11P83369 360 aaKnown RBP eCLIP11.75□□□□□ -0.53
GTF3C6-201ENST00000329970 GSG1Q2KHT4 349 aa11.75□□□□□ -0.53
GTF3C6-201ENST00000329970 TRMT5Q32P41 509 aaKnown RBP11.75□□□□□ -0.53
GTF3C6-201ENST00000329970 CYB5R2Q6BCY4 276 aa11.75□□□□□ -0.53
GTF3C6-201ENST00000329970 TTC33Q6PID6 262 aaPredicted RBP11.75□□□□□ -0.53
GTF3C6-201ENST00000329970 WDR88Q6ZMY6 472 aa11.75□□□□□ -0.53
GTF3C6-201ENST00000329970 SLC46A3Q7Z3Q1 461 aa11.75□□□□□ -0.53
GTF3C6-201ENST00000329970 ZNF540Q8NDQ6 660 aa11.75□□□□□ -0.53
GTF3C6-201ENST00000329970 OR8J3Q8NGG0 315 aa11.75□□□□□ -0.53
GTF3C6-201ENST00000329970 OR4D11Q8NGI4 311 aa11.75□□□□□ -0.53
GTF3C6-201ENST00000329970 OR10A6Q8NH74 314 aa11.75□□□□□ -0.53
GTF3C6-201ENST00000329970 OR6X1Q8NH79 312 aa11.75□□□□□ -0.53
GTF3C6-201ENST00000329970 NEU4Q8WWR8 484 aaPredicted RBP11.75□□□□□ -0.53
GTF3C6-201ENST00000329970 TMEM54Q969K7 222 aa11.75□□□□□ -0.53
GTF3C6-201ENST00000329970 TAMM41Q96BW9 452 aa11.75□□□□□ -0.53
GTF3C6-201ENST00000329970 TXNDC15Q96J42 360 aa11.75□□□□□ -0.53
GTF3C6-201ENST00000329970 DOK1Q99704 481 aa11.75□□□□□ -0.53
GTF3C6-201ENST00000329970 FOXB1Q99853 325 aa11.75□□□□□ -0.53
GTF3C6-201ENST00000329970 SH3GL1Q99961 368 aa11.75□□□□□ -0.53
GTF3C6-201ENST00000329970 EMC6Q9BV81 110 aa11.75□□□□□ -0.53
GTF3C6-201ENST00000329970 ULBP2Q9BZM5 246 aa11.75□□□□□ -0.53
GTF3C6-201ENST00000329970 RAB1BQ9H0U4 201 aa11.75□□□□□ -0.53
GTF3C6-201ENST00000329970 NOX3Q9HBY0 568 aa11.75□□□□□ -0.53
GTF3C6-201ENST00000329970 LPAR3Q9UBY5 353 aa11.75□□□□□ -0.53
GTF3C6-201ENST00000329970 ZNF229Q9UJW7 825 aa11.75□□□□□ -0.53
GTF3C6-201ENST00000329970 SVEP1Q4LDE5 3571 aa11.75□□□□□ -0.53
GTF3C6-201ENST00000329970 A0A0G2JND7 137 aa11.74□□□□□ -0.53
GTF3C6-201ENST00000329970 TMEM129A0AVI4 362 aa11.74□□□□□ -0.53
GTF3C6-201ENST00000329970 CPSF4LA6NMK7 179 aaKnown RBP11.74□□□□□ -0.53
GTF3C6-201ENST00000329970 BBIP1A8MTZ0 92 aa11.74□□□□□ -0.53
GTF3C6-201ENST00000329970 LRRN3E7EW58 273 aa11.74□□□□□ -0.53
GTF3C6-201ENST00000329970 hCG_2039718K7EN88 272 aa11.74□□□□□ -0.53
GTF3C6-201ENST00000329970 FBP2O00757 339 aa11.74□□□□□ -0.53
GTF3C6-201ENST00000329970 LY6HO94772 140 aa11.74□□□□□ -0.53
GTF3C6-201ENST00000329970 UBL3O95164 117 aa11.74□□□□□ -0.53
GTF3C6-201ENST00000329970 ASAH2BP0C7U1 165 aa11.74□□□□□ -0.53
GTF3C6-201ENST00000329970 FAM157CP0CG43 387 aa11.74□□□□□ -0.53
GTF3C6-201ENST00000329970 ADORA3P0DMS8 318 aa11.74□□□□□ -0.53
GTF3C6-201ENST00000329970 ZNF35P13682 527 aa11.74□□□□□ -0.53
GTF3C6-201ENST00000329970 NR4A1P22736 598 aa11.74□□□□□ -0.53
GTF3C6-201ENST00000329970 AHCYP23526 432 aa11.74□□□□□ -0.53
GTF3C6-201ENST00000329970 GIFP27352 417 aa11.74□□□□□ -0.53
GTF3C6-201ENST00000329970 THBS2P35442 1172 aa11.74□□□□□ -0.53
GTF3C6-201ENST00000329970 THBS4P35443 961 aa11.74□□□□□ -0.53
GTF3C6-201ENST00000329970 CRYBA2P53672 197 aa11.74□□□□□ -0.53
GTF3C6-201ENST00000329970 NPRL3Q12980 569 aa11.74□□□□□ -0.53
GTF3C6-201ENST00000329970 CAMK2DQ13557 499 aa11.74□□□□□ -0.53
GTF3C6-201ENST00000329970 CYLC2Q14093 348 aaPredicted RBP11.74□□□□□ -0.53
GTF3C6-201ENST00000329970 NRN1LQ496H8 165 aa11.74□□□□□ -0.53
GTF3C6-201ENST00000329970 NANOGP8Q6NSW7 305 aa11.74□□□□□ -0.53
GTF3C6-201ENST00000329970 ZNF813Q6ZN06 617 aa11.74□□□□□ -0.53
GTF3C6-201ENST00000329970 PIWIL3Q7Z3Z3 882 aaKnown RBP11.74□□□□□ -0.53
GTF3C6-201ENST00000329970 CALHM3Q86XJ0 350 aa11.74□□□□□ -0.53
GTF3C6-201ENST00000329970 OR6N1Q8NGY5 312 aa11.74□□□□□ -0.53
GTF3C6-201ENST00000329970 THOC1Q96FV9 657 aaKnown RBP11.74□□□□□ -0.53
GTF3C6-201ENST00000329970 NANOGQ9H9S0 305 aa11.74□□□□□ -0.53
GTF3C6-201ENST00000329970 NANSQ9NR45 359 aa11.74□□□□□ -0.53
GTF3C6-201ENST00000329970 TAS2R5Q9NYW4 299 aa11.74□□□□□ -0.53
GTF3C6-201ENST00000329970 ZNF224Q9NZL3 707 aa11.74□□□□□ -0.53
GTF3C6-201ENST00000329970 SLC7A7Q9UM01 511 aa11.74□□□□□ -0.53
GTF3C6-201ENST00000329970 POFUT2Q9Y2G5 429 aa11.74□□□□□ -0.53
GTF3C6-201ENST00000329970 CENPBD1B2RD01 187 aa11.73□□□□□ -0.53
GTF3C6-201ENST00000329970 FXYD1O00168 92 aa11.73□□□□□ -0.53
GTF3C6-201ENST00000329970 OR6A2O95222 327 aa11.73□□□□□ -0.53
GTF3C6-201ENST00000329970 HLA-HP01893 362 aa11.73□□□□□ -0.53
GTF3C6-201ENST00000329970 ERCC1P07992 297 aaPredicted RBP11.73□□□□□ -0.53
GTF3C6-201ENST00000329970 IFNGR1P15260 489 aa11.73□□□□□ -0.53
GTF3C6-201ENST00000329970 CSNK1A1P48729 337 aa11.73□□□□□ -0.53
GTF3C6-201ENST00000329970 SNTB2Q13425 540 aaKnown RBP11.73□□□□□ -0.53
GTF3C6-201ENST00000329970 DAG1Q14118 895 aa11.73□□□□□ -0.53
GTF3C6-201ENST00000329970 CARD17Q5XLA6 110 aa11.73□□□□□ -0.53
GTF3C6-201ENST00000329970 ERICH5Q6P6B1 374 aa11.73□□□□□ -0.53
GTF3C6-201ENST00000329970 VHLLQ6RSH7 139 aa11.73□□□□□ -0.53
GTF3C6-201ENST00000329970 SLC35D2Q76EJ3 337 aa11.73□□□□□ -0.53
GTF3C6-201ENST00000329970 TSPYL5Q86VY4 417 aaPredicted RBP11.73□□□□□ -0.53
GTF3C6-201ENST00000329970 RBM45Q8IUH3 476 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms