RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 CCDC36Q8IYA8 594 aa24.11■■□□□ 1.45
ATPAF1-201ENST00000329231 PFN4Q8NHR9 129 aa24.11■■□□□ 1.45
ATPAF1-201ENST00000329231 GEMIN6Q8WXD5 167 aaKnown RBP24.11■■□□□ 1.45
ATPAF1-201ENST00000329231 ZNF837Q96EG3 531 aaPredicted RBP24.11■■□□□ 1.45
ATPAF1-201ENST00000329231 SGTBQ96EQ0 304 aa24.11■■□□□ 1.45
ATPAF1-201ENST00000329231 Q96MF0 132 aa24.11■■□□□ 1.45
ATPAF1-201ENST00000329231 SLC38A2Q96QD8 506 aa24.11■■□□□ 1.45
ATPAF1-201ENST00000329231 MED31Q9Y3C7 131 aa24.11■■□□□ 1.45
ATPAF1-201ENST00000329231 BIDP55957 195 aa24.1■■□□□ 1.45
ATPAF1-201ENST00000329231 C3orf36Q3SXR2 165 aa24.1■■□□□ 1.45
ATPAF1-201ENST00000329231 FAM169BQ8N8A8 192 aa24.1■■□□□ 1.45
ATPAF1-201ENST00000329231 OR6X1Q8NH79 312 aa24.1■■□□□ 1.45
ATPAF1-201ENST00000329231 C18orf12Q96KH6 178 aa24.1■■□□□ 1.45
ATPAF1-201ENST00000329231 KCNS3Q9BQ31 491 aa24.1■■□□□ 1.45
ATPAF1-201ENST00000329231 ULBP2Q9BZM5 246 aa24.1■■□□□ 1.45
ATPAF1-201ENST00000329231 A4GNTQ9UNA3 340 aa24.1■■□□□ 1.45
ATPAF1-201ENST00000329231 ATP23Q9Y6H3 246 aa24.1■■□□□ 1.45
ATPAF1-201ENST00000329231 BLOC1S5-TXNDC5H3BN57 136 aa24.09■■□□□ 1.45
ATPAF1-201ENST00000329231 OR7A10O76100 309 aa24.09■■□□□ 1.45
ATPAF1-201ENST00000329231 SERPINA1P01009 418 aa24.09■■□□□ 1.45
ATPAF1-201ENST00000329231 CD8AP01732 235 aa24.09■■□□□ 1.45
ATPAF1-201ENST00000329231 FUT1P19526 365 aa24.09■■□□□ 1.45
ATPAF1-201ENST00000329231 TTKP33981 857 aa24.09■■□□□ 1.45
ATPAF1-201ENST00000329231 CSNK1A1P48729 337 aa24.09■■□□□ 1.45
ATPAF1-201ENST00000329231 IFI44LQ53G44 452 aa24.09■■□□□ 1.45
ATPAF1-201ENST00000329231 ZNF544Q6NX49 715 aa24.09■■□□□ 1.45
ATPAF1-201ENST00000329231 B3GLCTQ6Y288 498 aa24.09■■□□□ 1.45
ATPAF1-201ENST00000329231 FKBP9P1Q75LS8 142 aa24.09■■□□□ 1.45
ATPAF1-201ENST00000329231 FBXL14Q8N1E6 418 aa24.09■■□□□ 1.45
ATPAF1-201ENST00000329231 FAM162AQ96A26 154 aa24.09■■□□□ 1.45
ATPAF1-201ENST00000329231 BDH2Q9BUT1 245 aa24.09■■□□□ 1.45
ATPAF1-201ENST00000329231 ADA2Q9NZK5 511 aa24.09■■□□□ 1.45
ATPAF1-201ENST00000329231 CRNNQ9UBG3 495 aaPredicted RBP24.09■■□□□ 1.45
ATPAF1-201ENST00000329231 POFUT2Q9Y2G5 429 aa24.09■■□□□ 1.45
ATPAF1-201ENST00000329231 ALPK2Q86TB3 2170 aa24.08■■□□□ 1.45
ATPAF1-201ENST00000329231 ACANP16112 2415 aa24.08■■□□□ 1.45
ATPAF1-201ENST00000329231 IGHV1-18A0A0C4DH31 117 aa24.08■■□□□ 1.45
ATPAF1-201ENST00000329231 CDKN1AP38936 164 aa24.08■■□□□ 1.45
ATPAF1-201ENST00000329231 FABP6P51161 128 aa24.08■■□□□ 1.45
ATPAF1-201ENST00000329231 MNAT1P51948 309 aa24.08■■□□□ 1.45
ATPAF1-201ENST00000329231 TUBA1BP68363 451 aa24.08■■□□□ 1.45
ATPAF1-201ENST00000329231 TUBA4AP68366 448 aa24.08■■□□□ 1.45
ATPAF1-201ENST00000329231 TUBA1AQ71U36 451 aa24.08■■□□□ 1.45
ATPAF1-201ENST00000329231 PGAM4Q8N0Y7 254 aa24.08■■□□□ 1.45
ATPAF1-201ENST00000329231 MUC15Q8N387 334 aa24.08■■□□□ 1.45
ATPAF1-201ENST00000329231 LIPHQ8WWY8 451 aa24.08■■□□□ 1.45
ATPAF1-201ENST00000329231 KATNB1Q9BVA0 655 aa24.08■■□□□ 1.45
ATPAF1-201ENST00000329231 FNDC11Q9BVV2 318 aa24.08■■□□□ 1.45
ATPAF1-201ENST00000329231 C20orf141Q9NUB4 165 aa24.08■■□□□ 1.45
ATPAF1-201ENST00000329231 NDE1Q9NXR1 346 aa24.08■■□□□ 1.45
ATPAF1-201ENST00000329231 MOKQ9UQ07 419 aa24.08■■□□□ 1.45
ATPAF1-201ENST00000329231 ZNF469Q96JG9 3925 aaPredicted RBP24.07■■□□□ 1.44
ATPAF1-201ENST00000329231 HTR3EA5X5Y0 456 aa24.07■■□□□ 1.44
ATPAF1-201ENST00000329231 ATP6V1G2-DDX39BF2Z307 99 aa24.07■■□□□ 1.44
ATPAF1-201ENST00000329231 CRYAAP02489 173 aa24.07■■□□□ 1.44
ATPAF1-201ENST00000329231 WDFY1Q8IWB7 410 aa24.07■■□□□ 1.44
ATPAF1-201ENST00000329231 BCAS4Q8TDM0 211 aa24.07■■□□□ 1.44
ATPAF1-201ENST00000329231 SLC25A44Q96H78 314 aaPredicted RBP24.07■■□□□ 1.44
ATPAF1-201ENST00000329231 HSH2DQ96JZ2 352 aa24.07■■□□□ 1.44
ATPAF1-201ENST00000329231 CBLN4Q9NTU7 201 aa24.07■■□□□ 1.44
ATPAF1-201ENST00000329231 BCL10O95999 233 aa24.06■■□□□ 1.44
ATPAF1-201ENST00000329231 IGKV3-15P01624 115 aa24.06■■□□□ 1.44
ATPAF1-201ENST00000329231 IGLV1-44P01699 117 aa24.06■■□□□ 1.44
ATPAF1-201ENST00000329231 INHBBP09529 407 aa24.06■■□□□ 1.44
ATPAF1-201ENST00000329231 CBR1P16152 277 aa24.06■■□□□ 1.44
ATPAF1-201ENST00000329231 YAP1P46937 504 aaKnown RBP24.06■■□□□ 1.44
ATPAF1-201ENST00000329231 CAPZA2P47755 286 aa24.06■■□□□ 1.44
ATPAF1-201ENST00000329231 MXRA7P84157 204 aa24.06■■□□□ 1.44
ATPAF1-201ENST00000329231 RPL18Q07020 188 aaKnown RBP24.06■■□□□ 1.44
ATPAF1-201ENST00000329231 ETFDHQ16134 617 aa24.06■■□□□ 1.44
ATPAF1-201ENST00000329231 C16orf89Q6UX73 402 aa24.06■■□□□ 1.44
ATPAF1-201ENST00000329231 ZNF627Q7L945 461 aa24.06■■□□□ 1.44
ATPAF1-201ENST00000329231 BIVMQ86UB2 503 aa24.06■■□□□ 1.44
ATPAF1-201ENST00000329231 OFCC1Q8IZS5 231 aa24.06■■□□□ 1.44
ATPAF1-201ENST00000329231 TMEM54Q969K7 222 aa24.06■■□□□ 1.44
ATPAF1-201ENST00000329231 ZNF566Q969W8 418 aa24.06■■□□□ 1.44
ATPAF1-201ENST00000329231 NSL1Q96IY1 281 aa24.06■■□□□ 1.44
ATPAF1-201ENST00000329231 GLTPQ9NZD2 209 aa24.06■■□□□ 1.44
ATPAF1-201ENST00000329231 RPS6KA6Q9UK32 745 aa24.06■■□□□ 1.44
ATPAF1-201ENST00000329231 SNX13Q9Y5W8 968 aa24.06■■□□□ 1.44
ATPAF1-201ENST00000329231 FLNAP21333 2647 aaKnown RBP24.06■■□□□ 1.44
ATPAF1-201ENST00000329231 HEATR1Q9H583 2144 aaKnown RBP24.05■■□□□ 1.44
ATPAF1-201ENST00000329231 PLCE1Q9P212 2302 aa24.05■■□□□ 1.44
ATPAF1-201ENST00000329231 A0A1W2PRG6 482 aa24.05■■□□□ 1.44
ATPAF1-201ENST00000329231 GMNNO75496 209 aa24.05■■□□□ 1.44
ATPAF1-201ENST00000329231 SEC14L2O76054 403 aa24.05■■□□□ 1.44
ATPAF1-201ENST00000329231 CECR9P0C854 216 aa24.05■■□□□ 1.44
ATPAF1-201ENST00000329231 NCK1P16333 377 aa24.05■■□□□ 1.44
ATPAF1-201ENST00000329231 ARR3P36575 388 aa24.05■■□□□ 1.44
ATPAF1-201ENST00000329231 RIPPLY3P57055 190 aa24.05■■□□□ 1.44
ATPAF1-201ENST00000329231 TRAM2Q15035 370 aa24.05■■□□□ 1.44
ATPAF1-201ENST00000329231 ZNF813Q6ZN06 617 aa24.05■■□□□ 1.44
ATPAF1-201ENST00000329231 MTORP42345 2549 aa24.05■■□□□ 1.44
ATPAF1-201ENST00000329231 APOBEC3AP31941 199 aaPredicted RBP24.04■■□□□ 1.44
ATPAF1-201ENST00000329231 NAAAQ02083 359 aa24.04■■□□□ 1.44
ATPAF1-201ENST00000329231 MELKQ14680 651 aa24.04■■□□□ 1.44
ATPAF1-201ENST00000329231 GLYATQ6IB77 296 aa24.04■■□□□ 1.44
ATPAF1-201ENST00000329231 HDDC2Q7Z4H3 204 aa24.04■■□□□ 1.44
ATPAF1-201ENST00000329231 FOXB1Q99853 325 aa24.04■■□□□ 1.44
ATPAF1-201ENST00000329231 INIPQ9NRY2 104 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms