RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 RPS4Y1P22090 263 aaKnown RBP11.75□□□□□ -0.53
HMGCS1-201ENST00000325110 IL12BP29460 328 aa11.75□□□□□ -0.53
HMGCS1-201ENST00000325110 RBM34P42696 430 aaKnown RBP11.75□□□□□ -0.53
HMGCS1-201ENST00000325110 MGAT2Q10469 447 aa11.75□□□□□ -0.53
HMGCS1-201ENST00000325110 ALKBH1Q13686 389 aaKnown RBP11.75□□□□□ -0.53
HMGCS1-201ENST00000325110 CD226Q15762 336 aa11.75□□□□□ -0.53
HMGCS1-201ENST00000325110 SFRP5Q5T4F7 317 aa11.75□□□□□ -0.53
HMGCS1-201ENST00000325110 FAM69AQ5T7M9 428 aa11.75□□□□□ -0.53
HMGCS1-201ENST00000325110 HACD4Q5VWC8 232 aa11.75□□□□□ -0.53
HMGCS1-201ENST00000325110 TMEM92Q6UXU6 159 aa11.75□□□□□ -0.53
HMGCS1-201ENST00000325110 C3P1Q6ZMU1 363 aa11.75□□□□□ -0.53
HMGCS1-201ENST00000325110 KRT77Q7Z794 578 aa11.75□□□□□ -0.53
HMGCS1-201ENST00000325110 LIX1LQ8IVB5 337 aa11.75□□□□□ -0.53
HMGCS1-201ENST00000325110 FAM160A2Q8N612 972 aaPredicted RBP11.75□□□□□ -0.53
HMGCS1-201ENST00000325110 OR5M1Q8NGP8 315 aa11.75□□□□□ -0.53
HMGCS1-201ENST00000325110 NKX2-4Q9H2Z4 354 aa11.75□□□□□ -0.53
HMGCS1-201ENST00000325110 CENPMQ9NSP4 180 aa11.75□□□□□ -0.53
HMGCS1-201ENST00000325110 SESN1Q9Y6P5 492 aa11.75□□□□□ -0.53
HMGCS1-201ENST00000325110 SPAG17Q6Q759 2223 aa11.75□□□□□ -0.53
HMGCS1-201ENST00000325110 A0A087WUJ7 227 aa11.75□□□□□ -0.53
HMGCS1-201ENST00000325110 PRR32B1ATL7 298 aa11.75□□□□□ -0.53
HMGCS1-201ENST00000325110 MAPK3P27361 379 aaPredicted RBP11.75□□□□□ -0.53
HMGCS1-201ENST00000325110 PLA2G7Q13093 441 aa11.75□□□□□ -0.53
HMGCS1-201ENST00000325110 PRAMEF17Q5VTA0 474 aa11.75□□□□□ -0.53
HMGCS1-201ENST00000325110 C19orf47Q8N9M1 422 aaKnown RBP11.75□□□□□ -0.53
HMGCS1-201ENST00000325110 BOLLQ8N9W6 283 aaKnown RBP11.75□□□□□ -0.53
HMGCS1-201ENST00000325110 PHOSPHO2Q8TCD6 241 aa11.75□□□□□ -0.53
HMGCS1-201ENST00000325110 PPP1R14AQ96A00 147 aa11.75□□□□□ -0.53
HMGCS1-201ENST00000325110 SLC25A38Q96DW6 304 aa11.75□□□□□ -0.53
HMGCS1-201ENST00000325110 OR1F2PQ96R84 312 aa11.75□□□□□ -0.53
HMGCS1-201ENST00000325110 C7orf50Q9BRJ6 194 aaKnown RBP11.75□□□□□ -0.53
HMGCS1-201ENST00000325110 TBL1XR1Q9BZK7 514 aa11.75□□□□□ -0.53
HMGCS1-201ENST00000325110 SYNDIG1Q9H7V2 258 aa11.75□□□□□ -0.53
HMGCS1-201ENST00000325110 OBP2AQ9NY56 170 aa11.75□□□□□ -0.53
HMGCS1-201ENST00000325110 NTMQ9P121 344 aa11.75□□□□□ -0.53
HMGCS1-201ENST00000325110 KCNG2Q9UJ96 466 aa11.75□□□□□ -0.53
HMGCS1-201ENST00000325110 SLC22A13Q9Y226 551 aa11.75□□□□□ -0.53
HMGCS1-201ENST00000325110 PCDHGA9Q9Y5G4 932 aaKnown RBP11.75□□□□□ -0.53
HMGCS1-201ENST00000325110 OR5K3A6NET4 321 aa11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 PYCARD-AS1I3L0S3 204 aa11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 SULT1A3P0DMM9 295 aa11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 SULT1A4P0DMN0 295 aa11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 ZNF35P13682 527 aa11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 CAPZA2P47755 286 aa11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 ZP1P60852 638 aa11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 RPS11P62280 158 aaKnown RBP eCLIP11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 RPL18Q07020 188 aaKnown RBP11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 PUDPQ08623 228 aa11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 CHST4Q8NCG5 386 aa11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 KTI12Q96EK9 354 aaPredicted RBP11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 CMKLR1Q99788 373 aa11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 JAM3Q9BX67 310 aa11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 SLC7A5P2Q9GIP4 190 aa11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 ELOVL3Q9HB03 270 aa11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 HAO2Q9NYQ3 351 aa11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 ELF5Q9UKW6 265 aaPredicted RBP11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 TRAV8-7A0A075B6U6 113 aa11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 PSMD4P55036 377 aaKnown RBP11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 FBXW4P57775 412 aa11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 DYRK1AQ13627 763 aa11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 NKPD1Q17RQ9 610 aa11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 C1QL3Q5VWW1 255 aa11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 PWWP2BQ6NUJ5 590 aa11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 FAM199XQ6PEV8 388 aaPredicted RBP11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 LRFN4Q6PJG9 635 aa11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 FAM198BQ6UWH4 519 aa11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 TMEM184AQ6ZMB5 413 aa11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 COMMD2Q86X83 199 aa11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 ZNF321PQ8N8H1 164 aa11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 LMX1AQ8TE12 382 aa11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 DUSP19Q8WTR2 217 aa11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 ATOH1Q92858 354 aaPredicted RBP11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 DHCR7Q9UBM7 475 aaKnown RBP11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 TGFBR3LH3BV60 316 aa11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 SLC16A7O60669 478 aa11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 MEP1BQ16820 701 aa11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 ARHGAP40Q5TG30 622 aa11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 OR10K2Q6IF99 312 aa11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 OR51S1Q8NGJ8 323 aa11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 FLVCR1-AS1Q8TAF5 88 aa11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 GPR148Q8TDV2 347 aa11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 TOE1Q96GM8 510 aaKnown RBP11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 VSTM2LQ96N03 204 aa11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 GPR137Q96N19 417 aa11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 MICU1Q9BPX6 476 aa11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 GSX2Q9BZM3 304 aa11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 NXF5Q9H1B4 397 aaKnown RBP11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 PRDM9Q9NQV7 894 aa11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 YBX2Q9Y2T7 364 aaKnown RBP11.74□□□□□ -0.53
HMGCS1-201ENST00000325110 TMEM150CB9EJG8 249 aa11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 SOX1O00570 391 aaPredicted RBP11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 PRKACBP22694 351 aa11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 PTGS2P35354 604 aa11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 TNFRSF4P43489 277 aa11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 POU3F4P49335 361 aa11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 NR0B1P51843 470 aaKnown RBP11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 BEX5Q5H9J7 111 aa11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 C1orf189Q5VU69 101 aa11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 FBXO46Q6PJ61 603 aaPredicted RBP11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 NDUFAF7Q7L592 441 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms