RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 TK1P04183 234 aa7.34□□□□□ -1.23
CIITA-201ENST00000324288 METTL15P1P0C7V9 234 aa7.34□□□□□ -1.23
CIITA-201ENST00000324288 EXOSC2Q13868 293 aaKnown RBP7.34□□□□□ -1.23
CIITA-201ENST00000324288 MARCH8Q5T0T0 291 aa7.34□□□□□ -1.23
CIITA-201ENST00000324288 MANEALQ5VSG8 457 aa7.34□□□□□ -1.23
CIITA-201ENST00000324288 PRAMEF20Q5VT98 475 aa7.34□□□□□ -1.23
CIITA-201ENST00000324288 ANKRD34AQ69YU3 496 aa7.34□□□□□ -1.23
CIITA-201ENST00000324288 RELL1Q8IUW5 271 aa7.34□□□□□ -1.23
CIITA-201ENST00000324288 H1FXQ92522 213 aaKnown RBP7.34□□□□□ -1.23
CIITA-201ENST00000324288 PSMF1Q92530 271 aa7.34□□□□□ -1.23
CIITA-201ENST00000324288 SLC7A6Q92536 515 aa7.34□□□□□ -1.23
CIITA-201ENST00000324288 TRAPPC2LQ9UL33 140 aa7.34□□□□□ -1.23
CIITA-201ENST00000324288 PIRO00625 290 aa7.34□□□□□ -1.23
CIITA-201ENST00000324288 BLVRBP30043 206 aaPredicted RBP7.34□□□□□ -1.23
CIITA-201ENST00000324288 TAS2R46P59540 309 aa7.34□□□□□ -1.23
CIITA-201ENST00000324288 IRF4Q15306 451 aa7.34□□□□□ -1.23
CIITA-201ENST00000324288 MPEG1Q2M385 716 aa7.34□□□□□ -1.23
CIITA-201ENST00000324288 GRAMD2AQ8IUY3 354 aa7.34□□□□□ -1.23
CIITA-201ENST00000324288 ZNF587Q96SQ5 575 aaPredicted RBP7.34□□□□□ -1.23
CIITA-201ENST00000324288 NICN1Q9BSH3 213 aa7.34□□□□□ -1.23
CIITA-201ENST00000324288 HOXD1Q9GZZ0 328 aa7.34□□□□□ -1.23
CIITA-201ENST00000324288 ACSS1Q9NUB1 689 aaPredicted RBP7.34□□□□□ -1.23
CIITA-201ENST00000324288 KNDC1Q76NI1 1749 aa7.34□□□□□ -1.23
CIITA-201ENST00000324288 SNED1Q8TER0 1413 aa7.34□□□□□ -1.24
CIITA-201ENST00000324288 IGHV3-64DA0A0J9YX35 117 aa7.34□□□□□ -1.24
CIITA-201ENST00000324288 OR6C68A6NDL8 312 aa7.34□□□□□ -1.24
CIITA-201ENST00000324288 OR5K4A6NMS3 321 aa7.34□□□□□ -1.24
CIITA-201ENST00000324288 SLC43A1O75387 559 aa7.34□□□□□ -1.24
CIITA-201ENST00000324288 RAF1P04049 648 aa7.34□□□□□ -1.24
CIITA-201ENST00000324288 USF1P22415 310 aaPredicted RBP7.34□□□□□ -1.24
CIITA-201ENST00000324288 HNRNPA2B1P22626 353 aaKnown RBP7.34□□□□□ -1.24
CIITA-201ENST00000324288 OR1D4P47884 311 aa7.34□□□□□ -1.24
CIITA-201ENST00000324288 PRPS1P60891 318 aa7.34□□□□□ -1.24
CIITA-201ENST00000324288 RNLSQ5VYX0 342 aa7.34□□□□□ -1.24
CIITA-201ENST00000324288 TMEM64Q6YI46 380 aa7.34□□□□□ -1.24
CIITA-201ENST00000324288 OLIG3Q7RTU3 272 aa7.34□□□□□ -1.24
CIITA-201ENST00000324288 MYADMQ96S97 322 aa7.34□□□□□ -1.24
CIITA-201ENST00000324288 ZNF251Q9BRH9 671 aa7.34□□□□□ -1.24
CIITA-201ENST00000324288 ARV1Q9H2C2 271 aa7.34□□□□□ -1.24
CIITA-201ENST00000324288 DCAF16Q9NXF7 216 aa7.34□□□□□ -1.24
CIITA-201ENST00000324288 EMCNQ9ULC0 261 aa7.34□□□□□ -1.24
CIITA-201ENST00000324288 TCRBP04435 133 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 MMP2P08253 660 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 RIPPLY1Q0D2K3 151 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 KEAP1Q14145 624 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 MLF2Q15773 248 aaPredicted RBP7.33□□□□□ -1.24
CIITA-201ENST00000324288 SLC36A2Q495M3 483 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 MAMDC4Q6UXC1 1216 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 ATOH1Q92858 354 aaPredicted RBP7.33□□□□□ -1.24
CIITA-201ENST00000324288 NRIP3Q9NQ35 241 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 SEMA4GQ9NTN9 838 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 F6UZH7 168 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 ZNF593O00488 134 aaPredicted RBP7.33□□□□□ -1.24
CIITA-201ENST00000324288 MRPS14O60783 128 aaKnown RBP7.33□□□□□ -1.24
CIITA-201ENST00000324288 CSO75390 466 aaKnown RBP7.33□□□□□ -1.24
CIITA-201ENST00000324288 AK1P00568 194 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 IL1AP01583 271 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 SCGB1C2P0DMR2 95 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 TGFBR3Q03167 851 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 FABP9Q0Z7S8 132 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 MLLT11Q13015 90 aaPredicted RBP7.33□□□□□ -1.24
CIITA-201ENST00000324288 RAB7BQ96AH8 199 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 BMFQ96LC9 184 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 PCBP3P57721 371 aaKnown RBP7.33□□□□□ -1.24
CIITA-201ENST00000324288 ENTPD8Q5MY95 495 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 OR4F5Q8NH21 305 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 PIGTQ969N2 578 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 TOE1Q96GM8 510 aaKnown RBP7.33□□□□□ -1.24
CIITA-201ENST00000324288 OR4F4Q96R69 305 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 ARNT2Q9HBZ2 717 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 CGGBP1Q9UFW8 167 aaPredicted RBP7.33□□□□□ -1.24
CIITA-201ENST00000324288 AK3Q9UIJ7 227 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 NXT1Q9UKK6 140 aaKnown RBP7.33□□□□□ -1.24
CIITA-201ENST00000324288 GPR45Q9Y5Y3 372 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 LAMB4A4D0S4 1761 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 TMEM269A0A1B0GVZ9 245 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 LRIT2A6NDA9 550 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 P2RY10O00398 339 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 HPNP05981 417 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 DEFA4P12838 97 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 PIGAP37287 484 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 PSMB3P49720 205 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 DAPP51397 102 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 PTTG1IPP53801 180 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 COX20Q5RI15 118 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 LINC00346Q8IVM7 164 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 OR6M1Q8NGM8 313 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 OR13F1Q8NGS4 319 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 HHATLQ9HCP6 504 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 CD80P33681 288 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 UBE2IP63279 158 aaKnown RBP7.33□□□□□ -1.24
CIITA-201ENST00000324288 EDDM3AQ14507 147 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 SYPL1Q16563 259 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 MEP1BQ16820 701 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 SYT9Q86SS6 491 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 KLHDC8BQ8IXV7 354 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 ZFP62Q8NB50 900 aaPredicted RBP7.33□□□□□ -1.24
CIITA-201ENST00000324288 GPR26Q8NDV2 337 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 OR52I1Q8NGK6 324 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 UBE2FQ969M7 185 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms