RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 RAB3BP20337 219 aa14.18□□□□□ -0.14
SHROOM1-201ENST00000319854 BLKP51451 505 aa14.18□□□□□ -0.14
SHROOM1-201ENST00000319854 PSMA6P60900 246 aaKnown RBP14.18□□□□□ -0.14
SHROOM1-201ENST00000319854 ACSM3Q53FZ2 586 aa14.18□□□□□ -0.14
SHROOM1-201ENST00000319854 TMUB2Q71RG4 321 aa14.18□□□□□ -0.14
SHROOM1-201ENST00000319854 SLITRK4Q8IW52 837 aa14.18□□□□□ -0.14
SHROOM1-201ENST00000319854 LCORQ96JN0 433 aaPredicted RBP14.18□□□□□ -0.14
SHROOM1-201ENST00000319854 A0A1B0GVT2 93 aa14.18□□□□□ -0.14
SHROOM1-201ENST00000319854 CLDN4O14493 209 aa14.18□□□□□ -0.14
SHROOM1-201ENST00000319854 NKX2-2O95096 273 aa14.18□□□□□ -0.14
SHROOM1-201ENST00000319854 S100A11P31949 105 aa14.18□□□□□ -0.14
SHROOM1-201ENST00000319854 ACAA2P42765 397 aaKnown RBP14.18□□□□□ -0.14
SHROOM1-201ENST00000319854 DEFA5Q01523 94 aa14.18□□□□□ -0.14
SHROOM1-201ENST00000319854 KLHDC3Q9BQ90 382 aa14.18□□□□□ -0.14
SHROOM1-201ENST00000319854 ARL6Q9H0F7 186 aa14.18□□□□□ -0.14
SHROOM1-201ENST00000319854 Q9N2J8 555 aa14.18□□□□□ -0.14
SHROOM1-201ENST00000319854 PCDHGA5Q9Y5G8 931 aa14.18□□□□□ -0.14
SHROOM1-201ENST00000319854 A0A0B4J2E0 115 aa14.18□□□□□ -0.14
SHROOM1-201ENST00000319854 A0A1B0GX12 115 aa14.18□□□□□ -0.14
SHROOM1-201ENST00000319854 MCIDASD6RGH6 385 aa14.18□□□□□ -0.14
SHROOM1-201ENST00000319854 HIST1H1CP16403 213 aaKnown RBP14.18□□□□□ -0.14
SHROOM1-201ENST00000319854 RPS4Y1P22090 263 aaKnown RBP14.18□□□□□ -0.14
SHROOM1-201ENST00000319854 DYRK1AQ13627 763 aa14.18□□□□□ -0.14
SHROOM1-201ENST00000319854 PXKQ7Z7A4 578 aa14.18□□□□□ -0.14
SHROOM1-201ENST00000319854 SERPINA12Q8IW75 414 aa14.18□□□□□ -0.14
SHROOM1-201ENST00000319854 BRIX1Q8TDN6 353 aaKnown RBP14.18□□□□□ -0.14
SHROOM1-201ENST00000319854 LRRC46Q96FV0 321 aa14.18□□□□□ -0.14
SHROOM1-201ENST00000319854 C12orf57Q99622 126 aa14.18□□□□□ -0.14
SHROOM1-201ENST00000319854 NANSQ9NR45 359 aa14.18□□□□□ -0.14
SHROOM1-201ENST00000319854 MRPS33Q9Y291 106 aaKnown RBP14.18□□□□□ -0.14
SHROOM1-201ENST00000319854 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 C1orf189Q5VU69 101 aa14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 APOOLQ6UXV4 268 aa14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 CMTM4Q8IZR5 234 aa14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 LNX2Q8N448 690 aa14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 OR5J2Q8NH18 312 aa14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 OR52I2Q8NH67 350 aa14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 PHOSPHO1Q8TCT1 267 aa14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 SMIM4Q8WVI0 70 aa14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 SMPDL3BQ92485 455 aa14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 TSLPQ969D9 159 aa14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 PGLYRP3Q96LB9 341 aa14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 VSTM2LQ96N03 204 aa14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 NMNAT3Q96T66 252 aa14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 OR10A5Q9H207 317 aa14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 CAMK2AQ9UQM7 478 aa14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 AK6Q9Y3D8 172 aaKnown RBP14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 MED12Q93074 2177 aa14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 D6RAR5 112 aa14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 SC5DO75845 299 aa14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 CT45A8P0DMV1 189 aa14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 CT45A9P0DMV2 189 aa14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 EPXP11678 715 aa14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 ZNF3P17036 446 aa14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 MST1P26927 711 aa14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 SEC61A1P61619 476 aaKnown RBP14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 ERVK-25P63136 954 aa14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 BDH1Q02338 343 aa14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 CT45A2Q5DJT8 189 aa14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 METTL11BQ5VVY1 283 aa14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 CBLN3Q6UW01 205 aa14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 LINGO2Q7L985 606 aa14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 HSD17B13Q7Z5P4 300 aaPredicted RBP14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 TPRA1Q86W33 373 aa14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 ZPLD1Q8TCW7 415 aa14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 RASD2Q96D21 266 aa14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 TSSK2Q96PF2 358 aa14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 UQCC2Q9BRT2 126 aa14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 ESRP2Q9H6T0 727 aaKnown RBP14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 NOX3Q9HBY0 568 aa14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 CMC2Q9NRP2 79 aa14.17□□□□□ -0.14
SHROOM1-201ENST00000319854 C17orf105B2RV13 164 aa14.16□□□□□ -0.14
SHROOM1-201ENST00000319854 PLPP2O43688 288 aa14.16□□□□□ -0.14
SHROOM1-201ENST00000319854 PSMB10P40306 273 aa14.16□□□□□ -0.14
SHROOM1-201ENST00000319854 MAGEB1P43366 347 aa14.16□□□□□ -0.14
SHROOM1-201ENST00000319854 UBE2MP61081 183 aaKnown RBP14.16□□□□□ -0.14
SHROOM1-201ENST00000319854 PITPNAQ00169 270 aa14.16□□□□□ -0.14
SHROOM1-201ENST00000319854 ZNF660Q6AZW8 331 aaPredicted RBP14.16□□□□□ -0.14
SHROOM1-201ENST00000319854 GLDNQ6ZMI3 551 aaPredicted RBP14.16□□□□□ -0.14
SHROOM1-201ENST00000319854 GID4Q8IVV7 300 aa14.16□□□□□ -0.14
SHROOM1-201ENST00000319854 ZNRF4Q8WWF5 429 aa14.16□□□□□ -0.14
SHROOM1-201ENST00000319854 KISS1RQ969F8 398 aaPredicted RBP14.16□□□□□ -0.14
SHROOM1-201ENST00000319854 TRIM36Q9NQ86 728 aa14.16□□□□□ -0.14
SHROOM1-201ENST00000319854 IGHV1OR15-9A0A0B4J2B8 117 aa14.16□□□□□ -0.14
SHROOM1-201ENST00000319854 A0A1B0GUH1 482 aa14.16□□□□□ -0.14
SHROOM1-201ENST00000319854 OIP5O43482 229 aa14.16□□□□□ -0.14
SHROOM1-201ENST00000319854 RP2O75695 350 aa14.16□□□□□ -0.14
SHROOM1-201ENST00000319854 CD38P28907 300 aa14.16□□□□□ -0.14
SHROOM1-201ENST00000319854 CALCRP30988 508 aa14.16□□□□□ -0.14
SHROOM1-201ENST00000319854 LINC00303Q3SY05 128 aa14.16□□□□□ -0.14
SHROOM1-201ENST00000319854 STPG1Q5TH74 334 aa14.16□□□□□ -0.14
SHROOM1-201ENST00000319854 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.16□□□□□ -0.14
SHROOM1-201ENST00000319854 MEIOBQ8N635 442 aa14.16□□□□□ -0.14
SHROOM1-201ENST00000319854 BCORP1Q8N888 145 aa14.16□□□□□ -0.14
SHROOM1-201ENST00000319854 FAM71CQ8NEG0 241 aa14.16□□□□□ -0.14
SHROOM1-201ENST00000319854 GHSRQ92847 366 aa14.16□□□□□ -0.14
SHROOM1-201ENST00000319854 HSPA12BQ96MM6 686 aa14.16□□□□□ -0.14
SHROOM1-201ENST00000319854 C7orf50Q9BRJ6 194 aaKnown RBP14.16□□□□□ -0.14
SHROOM1-201ENST00000319854 THADAQ6YHU6 1953 aa14.16□□□□□ -0.14
SHROOM1-201ENST00000319854 CTNSO60931 367 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms