RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 ARMC4Q5T2S8 1044 aa24.44■■□□□ 1.5
CTDNEP1-201ENST00000318988 PLBD1Q6P4A8 553 aa24.44■■□□□ 1.5
CTDNEP1-201ENST00000318988 ABHD3Q8WU67 409 aa24.44■■□□□ 1.5
CTDNEP1-201ENST00000318988 ADAD1Q96M93 576 aaKnown RBP24.44■■□□□ 1.5
CTDNEP1-201ENST00000318988 DNAJC27Q9NZQ0 273 aa24.44■■□□□ 1.5
CTDNEP1-201ENST00000318988 FAM183AA6NL82 134 aa24.43■■□□□ 1.5
CTDNEP1-201ENST00000318988 GPR171O14626 319 aa24.43■■□□□ 1.5
CTDNEP1-201ENST00000318988 GABRA1P14867 456 aa24.43■■□□□ 1.5
CTDNEP1-201ENST00000318988 FMO3P31513 532 aa24.43■■□□□ 1.5
CTDNEP1-201ENST00000318988 CDKN2AP42771 156 aaKnown RBP24.43■■□□□ 1.5
CTDNEP1-201ENST00000318988 SLC16A1P53985 500 aa24.43■■□□□ 1.5
CTDNEP1-201ENST00000318988 SLC25A30Q5SVS4 291 aa24.43■■□□□ 1.5
CTDNEP1-201ENST00000318988 ZNF362Q5T0B9 420 aaPredicted RBP24.43■■□□□ 1.5
CTDNEP1-201ENST00000318988 APH1BQ8WW43 257 aa24.43■■□□□ 1.5
CTDNEP1-201ENST00000318988 HDAC2Q92769 488 aaKnown RBP24.43■■□□□ 1.5
CTDNEP1-201ENST00000318988 NR1H4Q96RI1 486 aaPredicted RBP24.43■■□□□ 1.5
CTDNEP1-201ENST00000318988 EMC6Q9BV81 110 aa24.43■■□□□ 1.5
CTDNEP1-201ENST00000318988 HINT3Q9NQE9 182 aaKnown RBP24.43■■□□□ 1.5
CTDNEP1-201ENST00000318988 SH3D21A4FU49 640 aa24.42■■□□□ 1.5
CTDNEP1-201ENST00000318988 ZNF716A6NP11 495 aa24.42■■□□□ 1.5
CTDNEP1-201ENST00000318988 WBP4O75554 376 aaKnown RBP24.42■■□□□ 1.5
CTDNEP1-201ENST00000318988 AQP8O94778 261 aa24.42■■□□□ 1.5
CTDNEP1-201ENST00000318988 CHN2P52757 468 aa24.42■■□□□ 1.5
CTDNEP1-201ENST00000318988 CSNK2BP67870 215 aa24.42■■□□□ 1.5
CTDNEP1-201ENST00000318988 RBPJQ06330 500 aa24.42■■□□□ 1.5
CTDNEP1-201ENST00000318988 FGD2Q7Z6J4 655 aa24.42■■□□□ 1.5
CTDNEP1-201ENST00000318988 GID4Q8IVV7 300 aa24.42■■□□□ 1.5
CTDNEP1-201ENST00000318988 NPEPL1Q8NDH3 523 aa24.42■■□□□ 1.5
CTDNEP1-201ENST00000318988 OR6X1Q8NH79 312 aa24.42■■□□□ 1.5
CTDNEP1-201ENST00000318988 RFKQ969G6 155 aa24.42■■□□□ 1.5
CTDNEP1-201ENST00000318988 PKD1L2Q7Z442 2459 aa24.42■■□□□ 1.5
CTDNEP1-201ENST00000318988 BOD1L1Q8NFC6 3051 aa24.42■■□□□ 1.5
CTDNEP1-201ENST00000318988 PRSS37A4D1T9 235 aa24.41■■□□□ 1.5
CTDNEP1-201ENST00000318988 SLC35F4A4IF30 521 aa24.41■■□□□ 1.5
CTDNEP1-201ENST00000318988 FIGNL2A6NMB9 653 aa24.41■■□□□ 1.5
CTDNEP1-201ENST00000318988 ENTPD6O75354 484 aa24.41■■□□□ 1.5
CTDNEP1-201ENST00000318988 IGHG1P01857 330 aa24.41■■□□□ 1.5
CTDNEP1-201ENST00000318988 TMEM201Q5SNT2 666 aa24.41■■□□□ 1.5
CTDNEP1-201ENST00000318988 NXNL2Q5VZ03 156 aa24.41■■□□□ 1.5
CTDNEP1-201ENST00000318988 PCSK4Q6UW60 755 aa24.41■■□□□ 1.5
CTDNEP1-201ENST00000318988 UGT2A3Q6UWM9 527 aa24.41■■□□□ 1.5
CTDNEP1-201ENST00000318988 PLXDC2Q6UX71 529 aa24.41■■□□□ 1.5
CTDNEP1-201ENST00000318988 NHLRC1Q6VVB1 395 aa24.41■■□□□ 1.5
CTDNEP1-201ENST00000318988 BPIFB6Q8NFQ5 453 aa24.41■■□□□ 1.5
CTDNEP1-201ENST00000318988 SLC25A44Q96H78 314 aaPredicted RBP24.41■■□□□ 1.5
CTDNEP1-201ENST00000318988 ZNF582Q96NG8 517 aaPredicted RBP24.41■■□□□ 1.5
CTDNEP1-201ENST00000318988 SNX18Q96RF0 628 aa24.41■■□□□ 1.5
CTDNEP1-201ENST00000318988 SCN3BQ9NY72 215 aa24.41■■□□□ 1.5
CTDNEP1-201ENST00000318988 BLOC1S6Q9UL45 172 aa24.41■■□□□ 1.5
CTDNEP1-201ENST00000318988 FLVCR1Q9Y5Y0 555 aa24.41■■□□□ 1.5
CTDNEP1-201ENST00000318988 H7C1C5 153 aa24.4■■□□□ 1.5
CTDNEP1-201ENST00000318988 WDR1O75083 606 aa24.4■■□□□ 1.5
CTDNEP1-201ENST00000318988 PTGER4P35408 488 aa24.4■■□□□ 1.5
CTDNEP1-201ENST00000318988 CLRN1P58418 232 aa24.4■■□□□ 1.5
CTDNEP1-201ENST00000318988 LCN6P62502 163 aa24.4■■□□□ 1.5
CTDNEP1-201ENST00000318988 KLHL12Q53G59 568 aa24.4■■□□□ 1.5
CTDNEP1-201ENST00000318988 RBM48Q5RL73 367 aaKnown RBP24.4■■□□□ 1.5
CTDNEP1-201ENST00000318988 BCDIN3DQ7Z5W3 292 aaKnown RBP24.4■■□□□ 1.5
CTDNEP1-201ENST00000318988 FAM57AQ8TBR7 257 aa24.4■■□□□ 1.5
CTDNEP1-201ENST00000318988 ZNF566Q969W8 418 aa24.4■■□□□ 1.5
CTDNEP1-201ENST00000318988 ZNF775Q96BV0 537 aaPredicted RBP24.4■■□□□ 1.5
CTDNEP1-201ENST00000318988 ZNF385AQ96PM9 386 aaKnown RBP24.4■■□□□ 1.5
CTDNEP1-201ENST00000318988 YTHDF1Q9BYJ9 559 aaKnown RBP24.4■■□□□ 1.5
CTDNEP1-201ENST00000318988 OR51V1Q9H2C8 321 aa24.4■■□□□ 1.5
CTDNEP1-201ENST00000318988 MED20Q9H944 212 aa24.4■■□□□ 1.5
CTDNEP1-201ENST00000318988 MYRFQ9Y2G1 1151 aa24.4■■□□□ 1.5
CTDNEP1-201ENST00000318988 MAP1BP46821 2468 aaKnown RBP24.4■■□□□ 1.5
CTDNEP1-201ENST00000318988 IGKV3D-15A0A087WSY6 115 aa24.4■■□□□ 1.5
CTDNEP1-201ENST00000318988 KDM4EB2RXH2 506 aaPredicted RBP24.4■■□□□ 1.5
CTDNEP1-201ENST00000318988 PRRG2O14669 202 aa24.4■■□□□ 1.5
CTDNEP1-201ENST00000318988 AHCYL1O43865 530 aa24.4■■□□□ 1.5
CTDNEP1-201ENST00000318988 FAM20BO75063 409 aa24.4■■□□□ 1.5
CTDNEP1-201ENST00000318988 TRMUO75648 421 aaKnown RBP24.4■■□□□ 1.5
CTDNEP1-201ENST00000318988 SMNDC1O75940 238 aaKnown RBP eCLIP24.4■■□□□ 1.5
CTDNEP1-201ENST00000318988 EDN3P14138 238 aa24.4■■□□□ 1.5
CTDNEP1-201ENST00000318988 CXCR4P61073 352 aa24.4■■□□□ 1.5
CTDNEP1-201ENST00000318988 LGALS3BPQ08380 585 aa24.4■■□□□ 1.5
CTDNEP1-201ENST00000318988 NFATC3Q12968 1075 aa24.4■■□□□ 1.5
CTDNEP1-201ENST00000318988 CAMK2DQ13557 499 aa24.4■■□□□ 1.5
CTDNEP1-201ENST00000318988 SMN1Q16637 294 aaKnown RBP24.4■■□□□ 1.5
CTDNEP1-201ENST00000318988 CD163Q86VB7 1156 aa24.4■■□□□ 1.5
CTDNEP1-201ENST00000318988 ALG12Q9BV10 488 aa24.4■■□□□ 1.5
CTDNEP1-201ENST00000318988 CALHM2Q9HA72 323 aa24.4■■□□□ 1.5
CTDNEP1-201ENST00000318988 RPRD1BQ9NQG5 326 aaKnown RBP24.4■■□□□ 1.5
CTDNEP1-201ENST00000318988 CLCF1Q9UBD9 225 aa24.4■■□□□ 1.5
CTDNEP1-201ENST00000318988 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP24.4■■□□□ 1.5
CTDNEP1-201ENST00000318988 OR6C68A6NDL8 312 aa24.39■■□□□ 1.49
CTDNEP1-201ENST00000318988 PRODHO43272 600 aa24.39■■□□□ 1.49
CTDNEP1-201ENST00000318988 TGM6O95932 706 aa24.39■■□□□ 1.49
CTDNEP1-201ENST00000318988 CDH11P55287 796 aa24.39■■□□□ 1.49
CTDNEP1-201ENST00000318988 RPS7P62081 194 aaKnown RBP24.39■■□□□ 1.49
CTDNEP1-201ENST00000318988 RUNX1T1Q06455 604 aa24.39■■□□□ 1.49
CTDNEP1-201ENST00000318988 ACSF3Q4G176 576 aaPredicted RBP24.39■■□□□ 1.49
CTDNEP1-201ENST00000318988 AADACL4Q5VUY2 407 aa24.39■■□□□ 1.49
CTDNEP1-201ENST00000318988 CARD17Q5XLA6 110 aa24.39■■□□□ 1.49
CTDNEP1-201ENST00000318988 NIPAL3Q6P499 406 aa24.39■■□□□ 1.49
CTDNEP1-201ENST00000318988 AAED1Q7RTV5 226 aa24.39■■□□□ 1.49
CTDNEP1-201ENST00000318988 ADGRE4PQ86SQ3 457 aa24.39■■□□□ 1.49
CTDNEP1-201ENST00000318988 ZIC4Q8N9L1 334 aa24.39■■□□□ 1.49
CTDNEP1-201ENST00000318988 SYT14Q8NB59 555 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms