RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 LCORQ96JN0 433 aaPredicted RBP12.86□□□□□ -0.35
VRK3-201ENST00000316763 ZCCHC4Q9H5U6 513 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 SLC39A1Q9NY26 324 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 RABL2AQ9UBK7 228 aaPredicted RBP12.86□□□□□ -0.35
VRK3-201ENST00000316763 RABL2BQ9UNT1 228 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 MOKQ9UQ07 419 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 HIF3AQ9Y2N7 669 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 DCHS1Q96JQ0 3298 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 ANKRD61A6NGH8 418 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 PDCD5O14737 125 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 PAHP00439 452 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 HIST1H2ABP04908 130 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 TACSTD2P09758 323 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 EPXP11678 715 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 SLC6A8P48029 635 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 DCAF7P61962 342 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 CD83Q01151 205 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 GPR176Q14439 515 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 CDK10Q15131 360 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 GXYLT1Q4G148 440 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 HSD17B12Q53GQ0 312 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 MRPL14Q6P1L8 145 aaKnown RBP12.86□□□□□ -0.35
VRK3-201ENST00000316763 ASB18Q6ZVZ8 466 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 HIST3H2AQ7L7L0 130 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 TMPRSS7Q7RTY8 843 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 KCTD20Q7Z5Y7 419 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 GLCCI1Q86VQ1 547 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 GHDCQ8N2G8 530 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 ZSCAN1Q8NBB4 408 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 MOSPD2Q8NHP6 518 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 ZNF563Q8TA94 476 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 HAVCR2Q8TDQ0 301 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 ZNF721Q8TF20 911 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 HIST1H2ACQ93077 130 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 ALG12Q9BV10 488 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 OR8D2Q9GZM6 311 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 C12orf10Q9HB07 376 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 ING3Q9NXR8 418 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 MPDZO75970 2070 aa12.85□□□□□ -0.35
VRK3-201ENST00000316763 TEX13CA0A0J9YWL9 993 aa12.85□□□□□ -0.35
VRK3-201ENST00000316763 A8MUA0 341 aa12.85□□□□□ -0.35
VRK3-201ENST00000316763 IDSB3KWA1 339 aa12.85□□□□□ -0.35
VRK3-201ENST00000316763 MAGEB4O15481 346 aaPredicted RBP12.85□□□□□ -0.35
VRK3-201ENST00000316763 EEF1E1O43324 174 aaKnown RBP12.85□□□□□ -0.35
VRK3-201ENST00000316763 CYC1P08574 325 aa12.85□□□□□ -0.35
VRK3-201ENST00000316763 SLC6A1P30531 599 aa12.85□□□□□ -0.35
VRK3-201ENST00000316763 AQP2P41181 271 aa12.85□□□□□ -0.35
VRK3-201ENST00000316763 FOXL2P58012 376 aa12.85□□□□□ -0.35
VRK3-201ENST00000316763 CTXN1P60606 82 aa12.85□□□□□ -0.35
VRK3-201ENST00000316763 CD226Q15762 336 aa12.85□□□□□ -0.35
VRK3-201ENST00000316763 ALG10Q5BKT4 473 aa12.85□□□□□ -0.35
VRK3-201ENST00000316763 SLC6A19Q695T7 634 aa12.85□□□□□ -0.35
VRK3-201ENST00000316763 UNQ9370/PRO34162Q6UXP9 181 aa12.85□□□□□ -0.35
VRK3-201ENST00000316763 SHISA6Q6ZSJ9 500 aa12.85□□□□□ -0.35
VRK3-201ENST00000316763 LANCL3Q6ZV70 420 aa12.85□□□□□ -0.35
VRK3-201ENST00000316763 NUP54Q7Z3B4 507 aa12.85□□□□□ -0.35
VRK3-201ENST00000316763 ASCC1Q8N9N2 400 aaKnown RBP12.85□□□□□ -0.35
VRK3-201ENST00000316763 DAZLQ92904 295 aaKnown RBP12.85□□□□□ -0.35
VRK3-201ENST00000316763 TRIM63Q969Q1 353 aa12.85□□□□□ -0.35
VRK3-201ENST00000316763 UPRTQ96BW1 309 aa12.85□□□□□ -0.35
VRK3-201ENST00000316763 CMTM3Q96MX0 182 aa12.85□□□□□ -0.35
VRK3-201ENST00000316763 LMF1Q96S06 567 aa12.85□□□□□ -0.35
VRK3-201ENST00000316763 SPSB2Q99619 263 aa12.85□□□□□ -0.35
VRK3-201ENST00000316763 LAT2Q9GZY6 243 aa12.85□□□□□ -0.35
VRK3-201ENST00000316763 NXF5Q9H1B4 397 aaKnown RBP12.85□□□□□ -0.35
VRK3-201ENST00000316763 ABCG5Q9H222 651 aa12.85□□□□□ -0.35
VRK3-201ENST00000316763 WDR54Q9H977 334 aa12.85□□□□□ -0.35
VRK3-201ENST00000316763 AKIRIN1Q9H9L7 192 aaPredicted RBP12.85□□□□□ -0.35
VRK3-201ENST00000316763 TMEM165Q9HC07 324 aa12.85□□□□□ -0.35
VRK3-201ENST00000316763 BRD7Q9NPI1 651 aa12.85□□□□□ -0.35
VRK3-201ENST00000316763 ACOXLQ9NUZ1 547 aa12.85□□□□□ -0.35
VRK3-201ENST00000316763 PISDQ9UG56 409 aa12.85□□□□□ -0.35
VRK3-201ENST00000316763 COPS3Q9UNS2 423 aa12.85□□□□□ -0.35
VRK3-201ENST00000316763 CACNG2Q9Y698 323 aa12.85□□□□□ -0.35
VRK3-201ENST00000316763 TMEM127O75204 238 aa12.84□□□□□ -0.35
VRK3-201ENST00000316763 SERPINI2O75830 405 aa12.84□□□□□ -0.35
VRK3-201ENST00000316763 UBL3O95164 117 aa12.84□□□□□ -0.35
VRK3-201ENST00000316763 JMJD7P0C870 316 aa12.84□□□□□ -0.35
VRK3-201ENST00000316763 SDHAP31040 664 aa12.84□□□□□ -0.35
VRK3-201ENST00000316763 RCVRNP35243 200 aa12.84□□□□□ -0.35
VRK3-201ENST00000316763 MRPL28Q13084 256 aaKnown RBP12.84□□□□□ -0.35
VRK3-201ENST00000316763 EIF3IQ13347 325 aaKnown RBP12.84□□□□□ -0.35
VRK3-201ENST00000316763 EMC4Q5J8M3 183 aa12.84□□□□□ -0.35
VRK3-201ENST00000316763 HLA-DQA1Q5Y7H0 255 aa12.84□□□□□ -0.35
VRK3-201ENST00000316763 SLC16A9Q7RTY1 509 aa12.84□□□□□ -0.35
VRK3-201ENST00000316763 FAM220AQ7Z4H9 259 aa12.84□□□□□ -0.35
VRK3-201ENST00000316763 ZNF321PQ8N8H1 164 aa12.84□□□□□ -0.35
VRK3-201ENST00000316763 ZNF671Q8TAW3 534 aa12.84□□□□□ -0.35
VRK3-201ENST00000316763 Q96M85 177 aa12.84□□□□□ -0.35
VRK3-201ENST00000316763 FYTTD1Q96QD9 318 aaKnown RBP12.84□□□□□ -0.35
VRK3-201ENST00000316763 ULBP3Q9BZM4 244 aa12.84□□□□□ -0.35
VRK3-201ENST00000316763 MMP25Q9NPA2 562 aa12.84□□□□□ -0.35
VRK3-201ENST00000316763 SPATA2Q9UM82 520 aa12.84□□□□□ -0.35
VRK3-201ENST00000316763 ZNF281Q9Y2X9 895 aa12.84□□□□□ -0.35
VRK3-201ENST00000316763 SPTBN4Q9H254 2564 aa12.84□□□□□ -0.35
VRK3-201ENST00000316763 A0A1W2PPK0 400 aa12.84□□□□□ -0.35
VRK3-201ENST00000316763 OIP5O43482 229 aa12.84□□□□□ -0.35
VRK3-201ENST00000316763 TXNDC12O95881 172 aa12.84□□□□□ -0.35
VRK3-201ENST00000316763 KLK3P07288 261 aaPredicted RBP12.84□□□□□ -0.35
VRK3-201ENST00000316763 HEXBP07686 556 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms