RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 H0YGG7 62 aa12.25□□□□□ -0.45
SKA3-202ENST00000314759 H7C417 338 aa12.25□□□□□ -0.45
SKA3-202ENST00000314759 SLC31A1O15431 190 aa12.25□□□□□ -0.45
SKA3-202ENST00000314759 FKTNO75072 461 aa12.25□□□□□ -0.45
SKA3-202ENST00000314759 UPK3AO75631 287 aa12.25□□□□□ -0.45
SKA3-202ENST00000314759 RBBP9O75884 186 aa12.25□□□□□ -0.45
SKA3-202ENST00000314759 RLN1P04808 185 aa12.25□□□□□ -0.45
SKA3-202ENST00000314759 CDKN2AP42771 156 aaKnown RBP12.25□□□□□ -0.45
SKA3-202ENST00000314759 ARF3P61204 181 aaPredicted RBP12.25□□□□□ -0.45
SKA3-202ENST00000314759 FLI1Q01543 452 aaPredicted RBP12.25□□□□□ -0.45
SKA3-202ENST00000314759 LIPNQ5VXI9 398 aa12.25□□□□□ -0.45
SKA3-202ENST00000314759 MUC20Q8N307 709 aaPredicted RBP12.25□□□□□ -0.45
SKA3-202ENST00000314759 OR5AK2Q8NH90 309 aa12.25□□□□□ -0.45
SKA3-202ENST00000314759 SLC25A28Q96A46 364 aa12.25□□□□□ -0.45
SKA3-202ENST00000314759 OR2M4Q96R27 311 aa12.25□□□□□ -0.45
SKA3-202ENST00000314759 SLITRK2Q9H156 845 aa12.25□□□□□ -0.45
SKA3-202ENST00000314759 RXFP3Q9NSD7 469 aa12.25□□□□□ -0.45
SKA3-202ENST00000314759 MTFP1Q9UDX5 166 aa12.25□□□□□ -0.45
SKA3-202ENST00000314759 MRM2Q9UI43 246 aaKnown RBP12.25□□□□□ -0.45
SKA3-202ENST00000314759 OR6C74A6NCV1 312 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 ABCD4O14678 606 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 ADH1BP00325 375 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 EGFP01133 1207 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 ACHEP22303 614 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 GJA4P35212 333 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 SORDQ00796 357 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 LTBQ06643 244 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 PABPC1L2AQ5JQF8 200 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 LEG1Q6P5S2 330 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 MCATQ8IVS2 390 aaKnown RBP12.24□□□□□ -0.45
SKA3-202ENST00000314759 BPIFCQ8NFQ6 507 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 OR10G6Q8NH81 332 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 C15orf40Q8WUR7 153 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 HOXB13Q92826 284 aaPredicted RBP12.24□□□□□ -0.45
SKA3-202ENST00000314759 ANKRD9Q96BM1 317 aaPredicted RBP12.24□□□□□ -0.45
SKA3-202ENST00000314759 PBX4Q9BYU1 374 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 SCPEP1Q9HB40 452 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 TRAV8-7A0A075B6U6 113 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 A0A087WUJ7 227 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 GRXCR1A8MXD5 290 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 F5H5P2 479 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 H0YC42 278 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 XRCC3O43542 346 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 MAS1P04201 325 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 PRMT2P55345 433 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 ALKBH1Q13686 389 aaKnown RBP12.24□□□□□ -0.45
SKA3-202ENST00000314759 KIR2DS3Q14952 304 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 SLC6A19Q695T7 634 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 ELP2Q6IA86 826 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 RD3Q7Z3Z2 195 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 PXT1Q8NFP0 134 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 OR2AK2Q8NG84 335 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 OR10K1Q8NGX5 313 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 LMAN2LQ9H0V9 348 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 SPACA6W5XKT8 324 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 HEATR5AQ86XA9 2040 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 TMEM272A0A1B0GTI8 110 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 POM121BA6NF01 834 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 PVRP15151 417 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 CSRP1P21291 193 aaKnown RBP12.24□□□□□ -0.45
SKA3-202ENST00000314759 GPR143P51810 404 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 PRRT3Q5FWE3 981 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 YOD1Q5VVQ6 348 aaPredicted RBP12.24□□□□□ -0.45
SKA3-202ENST00000314759 FAM3CQ92520 227 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 CCDC74AQ96AQ1 378 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 NKX6-2Q9C056 277 aaPredicted RBP12.24□□□□□ -0.45
SKA3-202ENST00000314759 MFFQ9GZY8 342 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 ZNF337Q9Y3M9 751 aa12.24□□□□□ -0.45
SKA3-202ENST00000314759 ALPK2Q86TB3 2170 aa12.23□□□□□ -0.45
SKA3-202ENST00000314759 TRBV5-5A0A0J9YX44 114 aa12.23□□□□□ -0.45
SKA3-202ENST00000314759 H3BSH0 61 aa12.23□□□□□ -0.45
SKA3-202ENST00000314759 CDC123O75794 336 aaPredicted RBP12.23□□□□□ -0.45
SKA3-202ENST00000314759 TACSTD2P09758 323 aa12.23□□□□□ -0.45
SKA3-202ENST00000314759 S1PR1P21453 382 aa12.23□□□□□ -0.45
SKA3-202ENST00000314759 MPGP29372 298 aa12.23□□□□□ -0.45
SKA3-202ENST00000314759 FAUP35544 74 aaKnown RBP12.23□□□□□ -0.45
SKA3-202ENST00000314759 RPS4XP62701 263 aaKnown RBP12.23□□□□□ -0.45
SKA3-202ENST00000314759 MC2RQ01718 297 aa12.23□□□□□ -0.45
SKA3-202ENST00000314759 TMEM88Q6PEY1 159 aa12.23□□□□□ -0.45
SKA3-202ENST00000314759 ZNF550Q7Z398 422 aa12.23□□□□□ -0.45
SKA3-202ENST00000314759 CA13Q8N1Q1 262 aa12.23□□□□□ -0.45
SKA3-202ENST00000314759 OR10AC1Q8NH08 325 aa12.23□□□□□ -0.45
SKA3-202ENST00000314759 OR1E3Q8WZA6 343 aa12.23□□□□□ -0.45
SKA3-202ENST00000314759 FGF13Q92913 245 aa12.23□□□□□ -0.45
SKA3-202ENST00000314759 C12orf57Q99622 126 aa12.23□□□□□ -0.45
SKA3-202ENST00000314759 ZFYVE21Q9BQ24 234 aa12.23□□□□□ -0.45
SKA3-202ENST00000314759 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.23□□□□□ -0.45
SKA3-202ENST00000314759 DTX4Q9Y2E6 619 aa12.23□□□□□ -0.45
SKA3-202ENST00000314759 MPTX1A8MV57 137 aa12.23□□□□□ -0.45
SKA3-202ENST00000314759 SIGLEC6O43699 453 aa12.23□□□□□ -0.45
SKA3-202ENST00000314759 ABHD16AO95870 558 aa12.23□□□□□ -0.45
SKA3-202ENST00000314759 ANXA2P07355 339 aaKnown RBP12.23□□□□□ -0.45
SKA3-202ENST00000314759 MAPK3P27361 379 aaPredicted RBP12.23□□□□□ -0.45
SKA3-202ENST00000314759 EFNB2P52799 333 aa12.23□□□□□ -0.45
SKA3-202ENST00000314759 GUCA2AQ02747 115 aa12.23□□□□□ -0.45
SKA3-202ENST00000314759 ISXQ2M1V0 245 aa12.23□□□□□ -0.45
SKA3-202ENST00000314759 OR51S1Q8NGJ8 323 aa12.23□□□□□ -0.45
SKA3-202ENST00000314759 RERGQ96A58 199 aaPredicted RBP12.23□□□□□ -0.45
SKA3-202ENST00000314759 NARS2Q96I59 477 aaKnown RBP12.23□□□□□ -0.45
SKA3-202ENST00000314759 ADAD1Q96M93 576 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms