RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 GGT3PA6NGU5 568 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 GOSR2O14653 212 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 CDC40O60508 579 aaKnown RBP eCLIP12.61□□□□□ -0.39
MKS1-201ENST00000313863 PRAMEF2O60811 474 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 IGKV1D-16P01601 117 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 ZNF35P13682 527 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 ADRA2CP18825 462 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 GRPRP30550 384 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 MAZP56270 477 aaKnown RBP12.61□□□□□ -0.39
MKS1-201ENST00000313863 ACTBP60709 375 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 SKP1P63208 163 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 ACTG1P63261 375 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 EGR3Q06889 387 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 TUSC1Q2TAM9 212 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 ALKAL2Q6UX46 152 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 NHLRC1Q6VVB1 395 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 RD3Q7Z3Z2 195 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 CDC20BQ86Y33 519 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 C12orf76Q8N812 135 aaPredicted RBP12.61□□□□□ -0.39
MKS1-201ENST00000313863 BVESQ8NE79 360 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 OR6K3Q8NGY3 331 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 RNF166Q96A37 237 aaPredicted RBP12.61□□□□□ -0.39
MKS1-201ENST00000313863 VSTM2LQ96N03 204 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 CCDC3Q9BQI4 270 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 SLC25A32Q9H2D1 315 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 TMEM138Q9NPI0 162 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 FRRS1LQ9P0K9 344 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 LAMP5Q9UJQ1 280 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 MRPS33Q9Y291 106 aaKnown RBP12.61□□□□□ -0.39
MKS1-201ENST00000313863 HIF3AQ9Y2N7 669 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 A8MUA0 341 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 SRPX2O60687 465 aaPredicted RBP12.61□□□□□ -0.39
MKS1-201ENST00000313863 TXNDC12O95881 172 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 UBBP0CG47 229 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 UBCP0CG48 685 aaKnown RBP12.61□□□□□ -0.39
MKS1-201ENST00000313863 S1PR1P21453 382 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 AGTR1P30556 359 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 SDHAP31040 664 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 CSF2RBP32927 897 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 SOX2P48431 317 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 RPS27AP62979 156 aaKnown RBP12.61□□□□□ -0.39
MKS1-201ENST00000313863 UBA52P62987 128 aaKnown RBP12.61□□□□□ -0.39
MKS1-201ENST00000313863 MAT1AQ00266 395 aaKnown RBP12.61□□□□□ -0.39
MKS1-201ENST00000313863 EIF2B5Q13144 721 aaKnown RBP12.61□□□□□ -0.39
MKS1-201ENST00000313863 SFRP5Q5T4F7 317 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 WBP2NLQ6ICG8 309 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 C11orf88Q6PI97 169 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 TFAP2EQ6VUC0 442 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 OR5M9Q8NGP3 310 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 OR5M1Q8NGP8 315 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 ZPLD1Q8TCW7 415 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 EDAQ92838 391 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 RIT1Q92963 219 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 C3orf49Q96BT1 292 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 Q96M85 177 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 APMAPQ9HDC9 416 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 CYB5R1Q9UHQ9 305 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 IKZF2Q9UKS7 526 aa12.61□□□□□ -0.39
MKS1-201ENST00000313863 HEATR5AQ86XA9 2040 aa12.6□□□□□ -0.39
MKS1-201ENST00000313863 MPDZO75970 2070 aa12.6□□□□□ -0.39
MKS1-201ENST00000313863 TRBV23OR9-2A0A075B6M9 112 aa12.6□□□□□ -0.39
MKS1-201ENST00000313863 D6RAR5 112 aa12.6□□□□□ -0.39
MKS1-201ENST00000313863 C5orf67F2Z3F1 127 aa12.6□□□□□ -0.39
MKS1-201ENST00000313863 PSMD9O00233 223 aa12.6□□□□□ -0.39
MKS1-201ENST00000313863 SULT1C2O00338 296 aa12.6□□□□□ -0.39
MKS1-201ENST00000313863 TNFRSF10CO14798 259 aa12.6□□□□□ -0.39
MKS1-201ENST00000313863 NDUFA2O43678 99 aa12.6□□□□□ -0.39
MKS1-201ENST00000313863 ABHD16AO95870 558 aa12.6□□□□□ -0.39
MKS1-201ENST00000313863 RENP00797 406 aa12.6□□□□□ -0.39
MKS1-201ENST00000313863 LPLP06858 475 aa12.6□□□□□ -0.39
MKS1-201ENST00000313863 GTF2F2P13984 249 aa12.6□□□□□ -0.39
MKS1-201ENST00000313863 FCARP24071 287 aa12.6□□□□□ -0.39
MKS1-201ENST00000313863 PRSS3P35030 304 aa12.6□□□□□ -0.39
MKS1-201ENST00000313863 CDKN2AP42771 156 aaKnown RBP12.6□□□□□ -0.39
MKS1-201ENST00000313863 TNFRSF4P43489 277 aa12.6□□□□□ -0.39
MKS1-201ENST00000313863 FGL1Q08830 312 aa12.6□□□□□ -0.39
MKS1-201ENST00000313863 CCINQ13939 588 aa12.6□□□□□ -0.39
MKS1-201ENST00000313863 GPR18Q14330 331 aa12.6□□□□□ -0.39
MKS1-201ENST00000313863 ITPRIPL2Q3MIP1 535 aa12.6□□□□□ -0.39
MKS1-201ENST00000313863 TANGO2Q6ICL3 276 aa12.6□□□□□ -0.39
MKS1-201ENST00000313863 C10orf53Q8N6V4 93 aa12.6□□□□□ -0.39
MKS1-201ENST00000313863 EXD3Q8N9H8 876 aa12.6□□□□□ -0.39
MKS1-201ENST00000313863 ZNF511Q8NB15 262 aa12.6□□□□□ -0.39
MKS1-201ENST00000313863 OR52B4Q8NGK2 314 aa12.6□□□□□ -0.39
MKS1-201ENST00000313863 OR1F2PQ96R84 312 aa12.6□□□□□ -0.39
MKS1-201ENST00000313863 WDR76Q9H967 626 aa12.6□□□□□ -0.39
MKS1-201ENST00000313863 SFXN1Q9H9B4 322 aa12.6□□□□□ -0.39
MKS1-201ENST00000313863 A6NCN8 305 aa12.6□□□□□ -0.39
MKS1-201ENST00000313863 OR4C45A6NMZ5 311 aa12.6□□□□□ -0.39
MKS1-201ENST00000313863 TTLL8A6PVC2 850 aa12.6□□□□□ -0.39
MKS1-201ENST00000313863 GRXCR1A8MXD5 290 aa12.6□□□□□ -0.39
MKS1-201ENST00000313863 BLOC1S5-TXNDC5H3BN57 136 aa12.6□□□□□ -0.39
MKS1-201ENST00000313863 SDC3O75056 442 aa12.6□□□□□ -0.39
MKS1-201ENST00000313863 PMS2P2O95744 297 aa12.6□□□□□ -0.39
MKS1-201ENST00000313863 MELTFP08582 738 aa12.6□□□□□ -0.39
MKS1-201ENST00000313863 RPS15P62841 145 aaKnown RBP12.6□□□□□ -0.39
MKS1-201ENST00000313863 ZNF273Q14593 569 aa12.6□□□□□ -0.39
MKS1-201ENST00000313863 RAB11BQ15907 218 aa12.6□□□□□ -0.39
MKS1-201ENST00000313863 ALG10Q5BKT4 473 aa12.6□□□□□ -0.39
MKS1-201ENST00000313863 OOSP2Q86WS3 158 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms