RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 LAMP5Q9UJQ1 280 aa13.15□□□□□ -0.3
SCUBE2-201ENST00000309263 PRR32B1ATL7 298 aa13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 F5H0A9 414 aaPredicted RBP13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 GPR31O00270 319 aa13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 VAMP1P23763 118 aa13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 RAB12Q6IQ22 244 aa13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 HAGHLQ6PII5 290 aaPredicted RBP13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 TMEM52Q8NDY8 209 aa13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 HAVCR1Q96D42 359 aa13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 MRPL48Q96GC5 212 aaKnown RBP13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 A0A1B0GW55 424 aa13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 EML2O95834 649 aa13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 F12P00748 615 aaPredicted RBP13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 DUX4L2P0CJ85 424 aa13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 DUX4L3P0CJ86 424 aa13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 DUX4L4P0CJ87 422 aa13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 DUX4L5P0CJ88 424 aa13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 DUX4L6P0CJ89 424 aa13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 DUX4L7P0CJ90 424 aa13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 SLC2A5P22732 501 aa13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 PPP2CBP62714 309 aa13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 PPP2CAP67775 309 aa13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 ERV3-1Q14264 604 aa13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 OR10K2Q6IF99 312 aa13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 ZNF227Q86WZ6 799 aa13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 PRSS58Q8IYP2 241 aa13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 SPICQ8N5J4 248 aa13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 TMIEQ8NEW7 156 aa13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 BPIFCQ8NFQ6 507 aa13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 COX14Q96I36 57 aa13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 TMEM231Q9H6L2 316 aa13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 DUX4Q9UBX2 424 aa13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 SPACA6W5XKT8 324 aa13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 HPGDP15428 266 aa13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 ADRA2CP18825 462 aa13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 SKP1P63208 163 aa13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 FAM53BQ14153 422 aa13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 FAM219AQ8IW50 185 aa13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 CMIPQ8IY22 773 aa13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 CDRT4Q8N9R6 151 aa13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 RSPRY1Q96DX4 576 aa13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 MRPS24Q96EL2 167 aaKnown RBP13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 CCDC3Q9BQI4 270 aa13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 JAM3Q9BX67 310 aa13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 SLC6A15Q9H2J7 730 aa13.14□□□□□ -0.31
SCUBE2-201ENST00000309263 COL4A3Q01955 1670 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 C13orf42A0A1B0GVH6 325 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 DCDC2BA2VCK2 349 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 EEF1E1-BLOC1S5C9J1V9 151 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 C11orf98E9PRG8 122 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 PLGP00747 810 aaPredicted RBP13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 POU3F4P49335 361 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 ENPP7Q6UWV6 458 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 ADAMTSL4Q6UY14 1074 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 DND1Q8IYX4 353 aaKnown RBP13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 OR2L13Q8N349 312 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 METTL27Q8N6F8 245 aaPredicted RBP13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 MFSD9Q8NBP5 474 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 RGP1Q92546 391 aaPredicted RBP13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 TSACCQ96A04 125 aaPredicted RBP13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 GAL3ST3Q96A11 431 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 RERGQ96A58 199 aaPredicted RBP13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 PNPLA2Q96AD5 504 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 ANKRD10Q9NXR5 420 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 DAPP1Q9UN19 280 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 OR2AT4A6NND4 320 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 CTSVO60911 334 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 RNGTTO60942 597 aaKnown RBP13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 PTP4A3O75365 173 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 ZNF28P17035 718 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 Q499Y3 187 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 CLRN3Q8NCR9 226 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 STEAP2Q8NFT2 490 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 OR5M9Q8NGP3 310 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 PPP1R14AQ96A00 147 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 NKX6-2Q9C056 277 aaPredicted RBP13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 PITHD1Q9GZP4 211 aaPredicted RBP13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 MTIF3Q9H2K0 278 aaKnown RBP13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 DNAJC13O75165 2243 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 SPTBN5Q9NRC6 3674 aaKnown RBP13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 CNOT1A5YKK6 2376 aaKnown RBP13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 OR2M5A3KFT3 312 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 A8MXK9 166 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 CSTAP01040 98 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 RAB40ALP0C0E4 278 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 PRSS3P35030 304 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 DIO1P49895 249 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 CTXN1P60606 82 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 PDGFRLQ15198 375 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 RHOUQ7L0Q8 258 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 POMGNT2Q8NAT1 580 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 WFIKKN2Q8TEU8 576 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 RAB40AQ8WXH6 277 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 MIB2Q96AX9 1013 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 WBP1Q96G27 269 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 C10orf90Q96M02 699 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 TBC1D29Q9UFV1 150 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 KLHDC2Q9Y2U9 406 aa13.13□□□□□ -0.31
SCUBE2-201ENST00000309263 ATG12O94817 140 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 THBS1P07996 1170 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms