RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 AGAP7PQ5VUJ5 663 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 ARL6Q9H0F7 186 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 FKRPQ9H9S5 495 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 ACOXLQ9NUZ1 547 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 EMC9Q9Y3B6 208 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 UGT2A1Q9Y4X1 527 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 PCM1Q15154 2024 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 SPINT1O43278 529 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 RP2O75695 350 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 PVALBP20472 110 aaPredicted RBP10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 NPR2P20594 1047 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 SNU13P55769 128 aaKnown RBP10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 SNRPD2P62316 118 aaKnown RBP10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 SLC22A6Q4U2R8 563 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 CRIPAKQ8N1N5 446 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 ARHGAP9Q9BRR9 750 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 OR11A1Q9GZK7 315 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 EIF1BO60739 113 aaKnown RBP10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 AKR7A3O95154 331 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 SFTPBP07988 381 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 IFNGR1P15260 489 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 EVI2BP34910 448 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 GRK1Q15835 563 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 ACKR1Q16570 336 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 HYAL4Q2M3T9 481 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 PRICKLE4Q2TBC4 344 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 RAB12Q6IQ22 244 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 CPEB2Q7Z5Q1 589 aaKnown RBP10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 IQCF2Q8IXL9 164 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 ARIH2OSQ8N7S6 290 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 CCDC54Q8NEL0 328 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 OR4C3Q8NH37 302 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 SLC25A43Q8WUT9 341 aaPredicted RBP10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 SLC52A3Q9NQ40 469 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 ACAD8Q9UKU7 415 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 WIF1Q9Y5W5 379 aa10.45□□□□□ -0.74
PCDHGC3-201ENST00000308177 VSTM5A8MXK1 200 aa10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 TP53P04637 393 aaPredicted RBP10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 CD79AP11912 226 aa10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 SRMP19623 302 aa10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 FGFBP1Q14512 234 aa10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 FAM57BQ71RH2 274 aa10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 NOXA1Q86UR1 476 aa10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 OR13C9Q8NGT0 318 aa10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 NANOS1Q8WY41 292 aaKnown RBP10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 ENKD1Q9H0I2 346 aa10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 CDCP1Q9H5V8 836 aa10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 COA3Q9Y2R0 106 aaPredicted RBP10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 FAM186AA6NE01 2351 aa10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 TEX46H3BTG2 121 aa10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 PAHP00439 452 aa10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 ZFP36L2P47974 494 aaKnown RBP10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 GZMMP51124 257 aa10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 SELENOVP59797 346 aa10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 EMC4Q5J8M3 183 aa10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 AAED1Q7RTV5 226 aa10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 ZSCAN4Q8NAM6 433 aaPredicted RBP10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 ZSCAN1Q8NBB4 408 aa10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 CSNK2A3Q8NEV1 391 aa10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 SORCS2Q96PQ0 1159 aa10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 C11orf54Q9H0W9 315 aaPredicted RBP10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 RBM38Q9H0Z9 239 aaKnown RBP10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 OSGIN1Q9UJX0 560 aa10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 PCOLCE2Q9UKZ9 415 aa10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 ZNF346Q9UL40 294 aaKnown RBP10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 MGAT4AQ9UM21 535 aa10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 LOC102725191A0A1B0GVB3 256 aa10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 FUCA1P04066 466 aa10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 MPEG1Q2M385 716 aa10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 C3orf33Q6P1S2 294 aa10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 UNQ6126/PRO20091Q6UXV3 157 aa10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 ZNF486Q96H40 463 aaPredicted RBP10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 TSSK2Q96PF2 358 aa10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 UTP23Q9BRU9 249 aaKnown RBP10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 ANKRD10Q9NXR5 420 aa10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 UNC13CQ8NB66 2214 aa10.44□□□□□ -0.74
PCDHGC3-201ENST00000308177 IGHV1OR21-1A0A087WYE8 117 aa10.43□□□□□ -0.74
PCDHGC3-201ENST00000308177 ZSCAN5BA6NJL1 495 aa10.43□□□□□ -0.74
PCDHGC3-201ENST00000308177 A6NLC8 198 aa10.43□□□□□ -0.74
PCDHGC3-201ENST00000308177 SLC43A1O75387 559 aa10.43□□□□□ -0.74
PCDHGC3-201ENST00000308177 SERPINA5P05154 406 aa10.43□□□□□ -0.74
PCDHGC3-201ENST00000308177 CD34P28906 385 aa10.43□□□□□ -0.74
PCDHGC3-201ENST00000308177 FABP5Q01469 135 aa10.43□□□□□ -0.74
PCDHGC3-201ENST00000308177 TMEM201Q5SNT2 666 aa10.43□□□□□ -0.74
PCDHGC3-201ENST00000308177 ESPNLQ6ZVH7 1005 aa10.43□□□□□ -0.74
PCDHGC3-201ENST00000308177 LRRC18Q8N456 261 aa10.43□□□□□ -0.74
PCDHGC3-201ENST00000308177 ESX1Q8N693 406 aa10.43□□□□□ -0.74
PCDHGC3-201ENST00000308177 OR4Q3Q8NH05 313 aa10.43□□□□□ -0.74
PCDHGC3-201ENST00000308177 PIGQQ9BRB3 760 aa10.43□□□□□ -0.74
PCDHGC3-201ENST00000308177 DPCDQ9BVM2 203 aaPredicted RBP10.43□□□□□ -0.74
PCDHGC3-201ENST00000308177 PPIL3Q9H2H8 161 aaKnown RBP10.43□□□□□ -0.74
PCDHGC3-201ENST00000308177 FBXO34Q9NWN3 711 aa10.43□□□□□ -0.74
PCDHGC3-201ENST00000308177 EMC3Q9P0I2 261 aa10.43□□□□□ -0.74
PCDHGC3-201ENST00000308177 MRPL33O75394 65 aaKnown RBP10.43□□□□□ -0.74
PCDHGC3-201ENST00000308177 GDNFP39905 211 aa10.43□□□□□ -0.74
PCDHGC3-201ENST00000308177 LSSP48449 732 aa10.43□□□□□ -0.74
PCDHGC3-201ENST00000308177 NXPH1P58417 271 aa10.43□□□□□ -0.74
PCDHGC3-201ENST00000308177 CDK5Q00535 292 aa10.43□□□□□ -0.74
PCDHGC3-201ENST00000308177 BDH1Q02338 343 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms