RNA–Protein interactions for RNA: ENST00000302631.7

SCAMP3-201, Transcript of secretory carrier membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP3, Length 1,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-201ENST00000302631 USE1Q9NZ43 259 aa17.72■□□□□ 0.43
SCAMP3-201ENST00000302631 FOXD3Q9UJU5 478 aaPredicted RBP17.72■□□□□ 0.43
SCAMP3-201ENST00000302631 SPTBN1Q01082 2364 aaKnown RBP17.71■□□□□ 0.43
SCAMP3-201ENST00000302631 FLNCQ14315 2725 aa17.71■□□□□ 0.43
SCAMP3-201ENST00000302631 USP9XQ93008 2570 aaPredicted RBP17.71■□□□□ 0.43
SCAMP3-201ENST00000302631 PDLIM1O00151 329 aa17.71■□□□□ 0.43
SCAMP3-201ENST00000302631 IMPA2O14732 288 aa17.71■□□□□ 0.43
SCAMP3-201ENST00000302631 MGRN1O60291 552 aa17.71■□□□□ 0.43
SCAMP3-201ENST00000302631 OSMP13725 252 aa17.71■□□□□ 0.43
SCAMP3-201ENST00000302631 SLC6A6P31641 620 aa17.71■□□□□ 0.43
SCAMP3-201ENST00000302631 ASCL1P50553 236 aa17.71■□□□□ 0.43
SCAMP3-201ENST00000302631 BIDP55957 195 aa17.71■□□□□ 0.43
SCAMP3-201ENST00000302631 TFF3Q07654 80 aa17.71■□□□□ 0.43
SCAMP3-201ENST00000302631 NIPAL3Q6P499 406 aa17.71■□□□□ 0.43
SCAMP3-201ENST00000302631 CASP12Q6UXS9 341 aa17.71■□□□□ 0.43
SCAMP3-201ENST00000302631 IGFN1Q86VF2 1251 aa17.71■□□□□ 0.43
SCAMP3-201ENST00000302631 ZNF100Q8IYN0 542 aa17.71■□□□□ 0.43
SCAMP3-201ENST00000302631 SLC25A44Q96H78 314 aaPredicted RBP17.71■□□□□ 0.43
SCAMP3-201ENST00000302631 SAMD8Q96LT4 415 aa17.71■□□□□ 0.43
SCAMP3-201ENST00000302631 TSPAN32Q96QS1 320 aa17.71■□□□□ 0.43
SCAMP3-201ENST00000302631 EMC6Q9BV81 110 aa17.71■□□□□ 0.43
SCAMP3-201ENST00000302631 MALT1Q9UDY8 824 aa17.71■□□□□ 0.43
SCAMP3-201ENST00000302631 PRSS50Q9UI38 385 aa17.71■□□□□ 0.43
SCAMP3-201ENST00000302631 POFUT2Q9Y2G5 429 aa17.71■□□□□ 0.43
SCAMP3-201ENST00000302631 HELZ2Q9BYK8 2649 aaKnown RBP17.7■□□□□ 0.42
SCAMP3-201ENST00000302631 DOPEY1Q5JWR5 2465 aa17.7■□□□□ 0.42
SCAMP3-201ENST00000302631 SERPINI2O75830 405 aa17.7■□□□□ 0.42
SCAMP3-201ENST00000302631 IGFBP1P08833 259 aaPredicted RBP17.7■□□□□ 0.42
SCAMP3-201ENST00000302631 RPL4P36578 427 aaKnown RBP17.7■□□□□ 0.42
SCAMP3-201ENST00000302631 ERVK-25P63136 954 aa17.7■□□□□ 0.42
SCAMP3-201ENST00000302631 RIPK1Q13546 671 aa17.7■□□□□ 0.42
SCAMP3-201ENST00000302631 MELKQ14680 651 aa17.7■□□□□ 0.42
SCAMP3-201ENST00000302631 HIST3H3Q16695 136 aa17.7■□□□□ 0.42
SCAMP3-201ENST00000302631 TSPO2Q5TGU0 170 aa17.7■□□□□ 0.42
SCAMP3-201ENST00000302631 FBXW9Q5XUX1 488 aa17.7■□□□□ 0.42
SCAMP3-201ENST00000302631 FAM205BPQ63HN1 556 aa17.7■□□□□ 0.42
SCAMP3-201ENST00000302631 GPR139Q6DWJ6 353 aa17.7■□□□□ 0.42
SCAMP3-201ENST00000302631 Q6ZT83 130 aa17.7■□□□□ 0.42
SCAMP3-201ENST00000302631 BEND4Q6ZU67 534 aa17.7■□□□□ 0.42
SCAMP3-201ENST00000302631 HDDC2Q7Z4H3 204 aa17.7■□□□□ 0.42
SCAMP3-201ENST00000302631 C20orf196Q8IYI0 205 aa17.7■□□□□ 0.42
SCAMP3-201ENST00000302631 GABRG1Q8N1C3 465 aa17.7■□□□□ 0.42
SCAMP3-201ENST00000302631 ARIH2OSQ8N7S6 290 aa17.7■□□□□ 0.42
SCAMP3-201ENST00000302631 POMGNT2Q8NAT1 580 aa17.7■□□□□ 0.42
SCAMP3-201ENST00000302631 TMEM54Q969K7 222 aa17.7■□□□□ 0.42
SCAMP3-201ENST00000302631 CIB1Q99828 191 aa17.7■□□□□ 0.42
SCAMP3-201ENST00000302631 RBM4BQ9BQ04 359 aaKnown RBP17.7■□□□□ 0.42
SCAMP3-201ENST00000302631 C9orf16Q9BUW7 83 aa17.7■□□□□ 0.42
SCAMP3-201ENST00000302631 RBM4Q9BWF3 364 aaKnown RBP17.7■□□□□ 0.42
SCAMP3-201ENST00000302631 POLDIP3Q9BY77 421 aaKnown RBP17.7■□□□□ 0.42
SCAMP3-201ENST00000302631 SLCO5A1Q9H2Y9 848 aa17.7■□□□□ 0.42
SCAMP3-201ENST00000302631 PAPOLBQ9NRJ5 636 aaKnown RBP17.7■□□□□ 0.42
SCAMP3-201ENST00000302631 SLC7A10Q9NS82 523 aa17.7■□□□□ 0.42
SCAMP3-201ENST00000302631 IL20RAQ9UHF4 553 aa17.7■□□□□ 0.42
SCAMP3-201ENST00000302631 ZNF726A6NNF4 738 aa17.69■□□□□ 0.42
SCAMP3-201ENST00000302631 RPL36A-HNRNPH2H7BZ11 118 aa17.69■□□□□ 0.42
SCAMP3-201ENST00000302631 BHLHE40O14503 412 aa17.69■□□□□ 0.42
SCAMP3-201ENST00000302631 CASQ2O14958 399 aaPredicted RBP17.69■□□□□ 0.42
SCAMP3-201ENST00000302631 IDH3BO43837 385 aa17.69■□□□□ 0.42
SCAMP3-201ENST00000302631 SLC43A1O75387 559 aa17.69■□□□□ 0.42
SCAMP3-201ENST00000302631 SMNDC1O75940 238 aaKnown RBP eCLIP17.69■□□□□ 0.42
SCAMP3-201ENST00000302631 ALPLP05186 524 aa17.69■□□□□ 0.42
SCAMP3-201ENST00000302631 PGA4P0DJD7 388 aa17.69■□□□□ 0.42
SCAMP3-201ENST00000302631 PGA3P0DJD8 388 aa17.69■□□□□ 0.42
SCAMP3-201ENST00000302631 SDHAP31040 664 aa17.69■□□□□ 0.42
SCAMP3-201ENST00000302631 RUNX1T1Q06455 604 aa17.69■□□□□ 0.42
SCAMP3-201ENST00000302631 DAG1Q14118 895 aa17.69■□□□□ 0.42
SCAMP3-201ENST00000302631 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.69■□□□□ 0.42
SCAMP3-201ENST00000302631 KCNK17Q96T54 332 aa17.69■□□□□ 0.42
SCAMP3-201ENST00000302631 KCNJ16Q9NPI9 418 aa17.69■□□□□ 0.42
SCAMP3-201ENST00000302631 ADAM18Q9Y3Q7 739 aa17.69■□□□□ 0.42
SCAMP3-201ENST00000302631 H0YHG0 523 aa17.68■□□□□ 0.42
SCAMP3-201ENST00000302631 UPK3AO75631 287 aa17.68■□□□□ 0.42
SCAMP3-201ENST00000302631 TRMUO75648 421 aaKnown RBP17.68■□□□□ 0.42
SCAMP3-201ENST00000302631 ACADSP16219 412 aa17.68■□□□□ 0.42
SCAMP3-201ENST00000302631 ALDH3A2P51648 485 aa17.68■□□□□ 0.42
SCAMP3-201ENST00000302631 RPS6KA3P51812 740 aa17.68■□□□□ 0.42
SCAMP3-201ENST00000302631 ZNF133P52736 654 aaPredicted RBP17.68■□□□□ 0.42
SCAMP3-201ENST00000302631 ESRRGP62508 458 aa17.68■□□□□ 0.42
SCAMP3-201ENST00000302631 CAMK2DQ13557 499 aa17.68■□□□□ 0.42
SCAMP3-201ENST00000302631 SLC36A3Q495N2 470 aa17.68■□□□□ 0.42
SCAMP3-201ENST00000302631 LUZP2Q86TE4 346 aa17.68■□□□□ 0.42
SCAMP3-201ENST00000302631 LNX2Q8N448 690 aa17.68■□□□□ 0.42
SCAMP3-201ENST00000302631 OR52L1Q8NGH7 329 aa17.68■□□□□ 0.42
SCAMP3-201ENST00000302631 HDAC2Q92769 488 aaKnown RBP17.68■□□□□ 0.42
SCAMP3-201ENST00000302631 NMD3Q96D46 503 aaKnown RBP17.68■□□□□ 0.42
SCAMP3-201ENST00000302631 Q96M85 177 aa17.68■□□□□ 0.42
SCAMP3-201ENST00000302631 SLC29A1Q99808 456 aa17.68■□□□□ 0.42
SCAMP3-201ENST00000302631 RNPEPL1Q9HAU8 725 aa17.68■□□□□ 0.42
SCAMP3-201ENST00000302631 ELOVL5Q9NYP7 299 aa17.68■□□□□ 0.42
SCAMP3-201ENST00000302631 KIF17Q9P2E2 1029 aa17.68■□□□□ 0.42
SCAMP3-201ENST00000302631 GRHPRQ9UBQ7 328 aa17.68■□□□□ 0.42
SCAMP3-201ENST00000302631 NKX1-2Q9UD57 310 aaPredicted RBP17.68■□□□□ 0.42
SCAMP3-201ENST00000302631 IER3IP1Q9Y5U9 82 aa17.68■□□□□ 0.42
SCAMP3-201ENST00000302631 NKX2-6A6NCS4 301 aa17.67■□□□□ 0.42
SCAMP3-201ENST00000302631 A6NIZ1 184 aa17.67■□□□□ 0.42
SCAMP3-201ENST00000302631 FAM90A27PA6NNH2 459 aa17.67■□□□□ 0.42
SCAMP3-201ENST00000302631 EEF1E1-BLOC1S5C9J1V9 151 aa17.67■□□□□ 0.42
SCAMP3-201ENST00000302631 SOCS2O14508 198 aa17.67■□□□□ 0.42
SCAMP3-201ENST00000302631 EI24O14681 340 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms