RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 ASB10Q8WXI3 467 aa11.63□□□□□ -0.55
CCDC7-202ENST00000302316 ISOC1Q96CN7 298 aa11.63□□□□□ -0.55
CCDC7-202ENST00000302316 TSSK2Q96PF2 358 aa11.63□□□□□ -0.55
CCDC7-202ENST00000302316 CNN2Q99439 309 aaKnown RBP11.63□□□□□ -0.55
CCDC7-202ENST00000302316 MED29Q9NX70 200 aa11.63□□□□□ -0.55
CCDC7-202ENST00000302316 PRSS37A4D1T9 235 aa11.63□□□□□ -0.55
CCDC7-202ENST00000302316 A6NIZ1 184 aa11.63□□□□□ -0.55
CCDC7-202ENST00000302316 C12orf71A8MTZ7 269 aa11.63□□□□□ -0.55
CCDC7-202ENST00000302316 H0YC42 278 aa11.63□□□□□ -0.55
CCDC7-202ENST00000302316 J3QRE1 110 aa11.63□□□□□ -0.55
CCDC7-202ENST00000302316 EIF1BO60739 113 aaKnown RBP11.63□□□□□ -0.55
CCDC7-202ENST00000302316 GLCEO94923 617 aa11.63□□□□□ -0.55
CCDC7-202ENST00000302316 KLK2P20151 261 aa11.63□□□□□ -0.55
CCDC7-202ENST00000302316 RAP1BP61224 184 aa11.63□□□□□ -0.55
CCDC7-202ENST00000302316 RAP1AP62834 184 aa11.63□□□□□ -0.55
CCDC7-202ENST00000302316 LHFPL3Q86UP9 236 aa11.63□□□□□ -0.55
CCDC7-202ENST00000302316 GGNQ86UU5 652 aa11.63□□□□□ -0.55
CCDC7-202ENST00000302316 SLC22A16Q86VW1 577 aa11.63□□□□□ -0.55
CCDC7-202ENST00000302316 ACBD7Q8N6N7 88 aa11.63□□□□□ -0.55
CCDC7-202ENST00000302316 EXD3Q8N9H8 876 aa11.63□□□□□ -0.55
CCDC7-202ENST00000302316 OR10H4Q8NGA5 316 aa11.63□□□□□ -0.55
CCDC7-202ENST00000302316 SNX18Q96RF0 628 aa11.63□□□□□ -0.55
CCDC7-202ENST00000302316 TBX5Q99593 518 aa11.63□□□□□ -0.55
CCDC7-202ENST00000302316 FUNDC2Q9BWH2 189 aa11.63□□□□□ -0.55
CCDC7-202ENST00000302316 NAA50Q9GZZ1 169 aaKnown RBP11.63□□□□□ -0.55
CCDC7-202ENST00000302316 RERGLQ9H628 205 aa11.63□□□□□ -0.55
CCDC7-202ENST00000302316 SRA1Q9HD15 236 aaKnown RBP11.63□□□□□ -0.55
CCDC7-202ENST00000302316 LSM2Q9Y333 95 aaKnown RBP11.63□□□□□ -0.55
CCDC7-202ENST00000302316 NOX1Q9Y5S8 564 aa11.63□□□□□ -0.55
CCDC7-202ENST00000302316 CFAP47Q6ZTR5 3102 aa11.63□□□□□ -0.55
CCDC7-202ENST00000302316 IGHV3-15A0A0B4J1V0 119 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 TMEM129A0AVI4 362 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 FAM171A2A8MVW0 826 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 LINC01387J3KSC0 135 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 ACOT7O00154 380 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 RAMP1O60894 148 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 TRMUO75648 421 aaKnown RBP11.62□□□□□ -0.55
CCDC7-202ENST00000302316 LIMS3P0CW19 117 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 LIMS4P0CW20 117 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 NAA10P41227 235 aaPredicted RBP11.62□□□□□ -0.55
CCDC7-202ENST00000302316 STARP49675 285 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 PPIAP62937 165 aaKnown RBP11.62□□□□□ -0.55
CCDC7-202ENST00000302316 GGTLC2Q14390 218 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 SPHARQ15513 63 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 ZNF239Q16600 458 aaKnown RBP11.62□□□□□ -0.55
CCDC7-202ENST00000302316 HYAL4Q2M3T9 481 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 CNPY1Q3B7I2 92 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 ARMCX4Q5H9R4 360 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 FAM205BPQ63HN1 556 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 ESPNLQ6ZVH7 1005 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 POMGNT2Q8NAT1 580 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 ZNF420Q8TAQ5 688 aaPredicted RBP11.62□□□□□ -0.55
CCDC7-202ENST00000302316 ZHX1-C8orf76Q96EF9 292 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 COG8Q96MW5 612 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 MGLLQ99685 303 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 ALG12Q9BV10 488 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 JAM3Q9BX67 310 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 SLC6A15Q9H2J7 730 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 ERVK13-1Q9NX77 482 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 MOKQ9UQ07 419 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 DCTN6O00399 190 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 ZNF43P17038 809 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 LIPAP38571 399 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 BIDP55957 195 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 WNT4P56705 351 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 ACTC1P68032 377 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 ACTA1P68133 377 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 H3F3AP84243 136 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 RUNX1T1Q06455 604 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 DOC2BQ14184 412 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 OR2G6Q5TZ20 316 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 HBMQ6B0K9 141 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 SPACA3Q8IXA5 215 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 OR6V1Q8N148 313 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 FAM109AQ8N4B1 249 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 OR2V1Q8NHB1 315 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 NMD3Q96D46 503 aaKnown RBP11.62□□□□□ -0.55
CCDC7-202ENST00000302316 YIPF6Q96EC8 236 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 TXNDC15Q96J42 360 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 OXGR1Q96P68 337 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 SMAD5Q99717 465 aaKnown RBP11.62□□□□□ -0.55
CCDC7-202ENST00000302316 NAA11Q9BSU3 229 aaPredicted RBP11.62□□□□□ -0.55
CCDC7-202ENST00000302316 SRXN1Q9BYN0 137 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 NUAK2Q9H093 628 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 VSX1Q9NZR4 365 aaPredicted RBP11.62□□□□□ -0.55
CCDC7-202ENST00000302316 RASD1Q9Y272 281 aa11.62□□□□□ -0.55
CCDC7-202ENST00000302316 LOC400499M0QZD8 3231 aa11.61□□□□□ -0.55
CCDC7-202ENST00000302316 FREM3P0C091 2139 aa11.61□□□□□ -0.55
CCDC7-202ENST00000302316 TRAV17A0A0B4J275 112 aa11.61□□□□□ -0.55
CCDC7-202ENST00000302316 DAPL1A0PJW8 107 aa11.61□□□□□ -0.55
CCDC7-202ENST00000302316 SLC22A23A1A5C7 686 aa11.61□□□□□ -0.55
CCDC7-202ENST00000302316 DNPH1O43598 174 aa11.61□□□□□ -0.55
CCDC7-202ENST00000302316 TRAF3IP2O43734 574 aaPredicted RBP11.61□□□□□ -0.55
CCDC7-202ENST00000302316 CD36P16671 472 aa11.61□□□□□ -0.55
CCDC7-202ENST00000302316 EIF1AXP47813 144 aaKnown RBP11.61□□□□□ -0.55
CCDC7-202ENST00000302316 RAC3P60763 192 aa11.61□□□□□ -0.55
CCDC7-202ENST00000302316 LINC01590Q5TEZ4 76 aa11.61□□□□□ -0.55
CCDC7-202ENST00000302316 EEF1A1P5Q5VTE0 462 aa11.61□□□□□ -0.55
CCDC7-202ENST00000302316 LYPD4Q6UWN0 246 aa11.61□□□□□ -0.55
CCDC7-202ENST00000302316 P2RY8Q86VZ1 359 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms