RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 UBQLN2Q9UHD9 624 aa19.92■□□□□ 0.78
TPM4-201ENST00000300933 RGS9O75916 674 aaPredicted RBP19.92■□□□□ 0.78
TPM4-201ENST00000300933 IFNA7P01567 189 aa19.92■□□□□ 0.78
TPM4-201ENST00000300933 AHCYP23526 432 aa19.92■□□□□ 0.78
TPM4-201ENST00000300933 CCR6P51684 374 aa19.92■□□□□ 0.78
TPM4-201ENST00000300933 PLCXD2Q0VAA5 305 aa19.92■□□□□ 0.78
TPM4-201ENST00000300933 PIAS4Q8N2W9 510 aaPredicted RBP19.92■□□□□ 0.78
TPM4-201ENST00000300933 FAM71CQ8NEG0 241 aa19.92■□□□□ 0.78
TPM4-201ENST00000300933 GHSRQ92847 366 aa19.92■□□□□ 0.78
TPM4-201ENST00000300933 RBP7Q96R05 134 aa19.92■□□□□ 0.78
TPM4-201ENST00000300933 SRA1Q9HD15 236 aaKnown RBP19.92■□□□□ 0.78
TPM4-201ENST00000300933 FRG2CA6NGY1 282 aa19.91■□□□□ 0.78
TPM4-201ENST00000300933 ATP6V1G2-DDX39BF2Z307 99 aa19.91■□□□□ 0.78
TPM4-201ENST00000300933 GUSBP08236 651 aa19.91■□□□□ 0.78
TPM4-201ENST00000300933 CD3GP09693 182 aa19.91■□□□□ 0.78
TPM4-201ENST00000300933 MAGEB1P43366 347 aa19.91■□□□□ 0.78
TPM4-201ENST00000300933 ZNF74Q16587 644 aa19.91■□□□□ 0.78
TPM4-201ENST00000300933 TAAR8Q969N4 342 aa19.91■□□□□ 0.78
TPM4-201ENST00000300933 OR6C1Q96RD1 312 aa19.91■□□□□ 0.78
TPM4-201ENST00000300933 JAM3Q9BX67 310 aa19.91■□□□□ 0.78
TPM4-201ENST00000300933 WWTR1Q9GZV5 400 aa19.91■□□□□ 0.78
TPM4-201ENST00000300933 NRIP3Q9NQ35 241 aa19.91■□□□□ 0.78
TPM4-201ENST00000300933 MRPL39Q9NYK5 338 aaKnown RBP19.91■□□□□ 0.78
TPM4-201ENST00000300933 GNG8Q9UK08 70 aa19.91■□□□□ 0.78
TPM4-201ENST00000300933 PPIEQ9UNP9 301 aaKnown RBP19.91■□□□□ 0.78
TPM4-201ENST00000300933 MRPS7Q9Y2R9 242 aaKnown RBP19.91■□□□□ 0.78
TPM4-201ENST00000300933 GPANK1O95872 356 aa19.91■□□□□ 0.78
TPM4-201ENST00000300933 TCRBP04435 133 aa19.91■□□□□ 0.78
TPM4-201ENST00000300933 DNASE1P24855 282 aa19.91■□□□□ 0.78
TPM4-201ENST00000300933 ABCD3P28288 659 aa19.91■□□□□ 0.78
TPM4-201ENST00000300933 PITPNBP48739 271 aa19.91■□□□□ 0.78
TPM4-201ENST00000300933 CTXN1P60606 82 aa19.91■□□□□ 0.78
TPM4-201ENST00000300933 PON3Q15166 354 aa19.91■□□□□ 0.78
TPM4-201ENST00000300933 MTFR2Q6P444 385 aa19.91■□□□□ 0.78
TPM4-201ENST00000300933 ABHD4Q8TB40 342 aa19.91■□□□□ 0.78
TPM4-201ENST00000300933 FOXN4Q96NZ1 517 aa19.91■□□□□ 0.78
TPM4-201ENST00000300933 DPAGT1Q9H3H5 408 aa19.91■□□□□ 0.78
TPM4-201ENST00000300933 CYSLTR2Q9NS75 346 aa19.91■□□□□ 0.78
TPM4-201ENST00000300933 RDH8Q9NYR8 311 aa19.91■□□□□ 0.78
TPM4-201ENST00000300933 BAIAP2Q9UQB8 552 aa19.91■□□□□ 0.78
TPM4-201ENST00000300933 TMEM265A0A087WTH1 108 aa19.9■□□□□ 0.78
TPM4-201ENST00000300933 C7orf66A4D0T2 115 aa19.9■□□□□ 0.78
TPM4-201ENST00000300933 DCTN6O00399 190 aa19.9■□□□□ 0.78
TPM4-201ENST00000300933 SPI1P17947 270 aa19.9■□□□□ 0.78
TPM4-201ENST00000300933 RAB14P61106 215 aa19.9■□□□□ 0.78
TPM4-201ENST00000300933 ZSWIM7Q19AV6 140 aa19.9■□□□□ 0.78
TPM4-201ENST00000300933 DPY19L2P2Q6ZN68 376 aa19.9■□□□□ 0.78
TPM4-201ENST00000300933 STT3BQ8TCJ2 826 aa19.9■□□□□ 0.78
TPM4-201ENST00000300933 SLC25A36Q96CQ1 311 aa19.9■□□□□ 0.78
TPM4-201ENST00000300933 MVB12AQ96EY5 273 aa19.9■□□□□ 0.78
TPM4-201ENST00000300933 LPAR4Q99677 370 aa19.9■□□□□ 0.78
TPM4-201ENST00000300933 PDCD1LG2Q9BQ51 273 aa19.9■□□□□ 0.78
TPM4-201ENST00000300933 RASD1Q9Y272 281 aa19.9■□□□□ 0.78
TPM4-201ENST00000300933 A0A1W2PQM1 296 aa19.9■□□□□ 0.78
TPM4-201ENST00000300933 CDC40O60508 579 aaKnown RBP eCLIP19.9■□□□□ 0.78
TPM4-201ENST00000300933 ZNF354AO60765 605 aaPredicted RBP19.9■□□□□ 0.78
TPM4-201ENST00000300933 GALNSP34059 522 aa19.9■□□□□ 0.78
TPM4-201ENST00000300933 LRRC28Q86X40 367 aaPredicted RBP19.9■□□□□ 0.78
TPM4-201ENST00000300933 MAFAQ8NHW3 353 aaPredicted RBP19.9■□□□□ 0.78
TPM4-201ENST00000300933 SNX33Q8WV41 574 aa19.9■□□□□ 0.78
TPM4-201ENST00000300933 DAZLQ92904 295 aaKnown RBP19.9■□□□□ 0.78
TPM4-201ENST00000300933 MMP25Q9NPA2 562 aa19.9■□□□□ 0.78
TPM4-201ENST00000300933 COPS7AQ9UBW8 275 aa19.9■□□□□ 0.78
TPM4-201ENST00000300933 C11orf98E9PRG8 122 aa19.89■□□□□ 0.78
TPM4-201ENST00000300933 SSNA1O43805 119 aa19.89■□□□□ 0.78
TPM4-201ENST00000300933 PPM1BO75688 479 aa19.89■□□□□ 0.78
TPM4-201ENST00000300933 HSF2Q03933 536 aa19.89■□□□□ 0.78
TPM4-201ENST00000300933 CLLU1Q5K131 121 aa19.89■□□□□ 0.78
TPM4-201ENST00000300933 LYSMD4Q5XG99 296 aa19.89■□□□□ 0.78
TPM4-201ENST00000300933 PRSS42Q7Z5A4 293 aa19.89■□□□□ 0.78
TPM4-201ENST00000300933 PIGKQ92643 395 aa19.89■□□□□ 0.78
TPM4-201ENST00000300933 PELI1Q96FA3 418 aa19.89■□□□□ 0.78
TPM4-201ENST00000300933 TBL1XR1Q9BZK7 514 aa19.89■□□□□ 0.78
TPM4-201ENST00000300933 H3BSH0 61 aa19.89■□□□□ 0.77
TPM4-201ENST00000300933 SIGLEC6O43699 453 aa19.89■□□□□ 0.77
TPM4-201ENST00000300933 CCL7P80098 99 aa19.89■□□□□ 0.77
TPM4-201ENST00000300933 BTN1A1Q13410 526 aa19.89■□□□□ 0.77
TPM4-201ENST00000300933 CAMK2DQ13557 499 aa19.89■□□□□ 0.77
TPM4-201ENST00000300933 ALG10Q5BKT4 473 aa19.89■□□□□ 0.77
TPM4-201ENST00000300933 COX15Q7KZN9 410 aa19.89■□□□□ 0.77
TPM4-201ENST00000300933 SLC35F2Q8IXU6 374 aa19.89■□□□□ 0.77
TPM4-201ENST00000300933 NXPE2Q96DL1 559 aa19.89■□□□□ 0.77
TPM4-201ENST00000300933 PGLYRP3Q96LB9 341 aa19.89■□□□□ 0.77
TPM4-201ENST00000300933 ZFP3Q96NJ6 502 aa19.89■□□□□ 0.77
TPM4-201ENST00000300933 CNN2Q99439 309 aaKnown RBP19.89■□□□□ 0.77
TPM4-201ENST00000300933 AKIRIN1Q9H9L7 192 aaPredicted RBP19.89■□□□□ 0.77
TPM4-201ENST00000300933 PRR32B1ATL7 298 aa19.89■□□□□ 0.77
TPM4-201ENST00000300933 PLGP00747 810 aaPredicted RBP19.89■□□□□ 0.77
TPM4-201ENST00000300933 RRASP10301 218 aa19.89■□□□□ 0.77
TPM4-201ENST00000300933 CFL1P23528 166 aaKnown RBP19.89■□□□□ 0.77
TPM4-201ENST00000300933 PUDPQ08623 228 aa19.89■□□□□ 0.77
TPM4-201ENST00000300933 ST3GAL2Q16842 350 aa19.89■□□□□ 0.77
TPM4-201ENST00000300933 CD276Q5ZPR3 534 aa19.89■□□□□ 0.77
TPM4-201ENST00000300933 LSM14AQ8ND56 463 aaKnown RBP19.89■□□□□ 0.77
TPM4-201ENST00000300933 OR1N1Q8NGS0 311 aa19.89■□□□□ 0.77
TPM4-201ENST00000300933 NPAS1Q99742 590 aa19.89■□□□□ 0.77
TPM4-201ENST00000300933 APMAPQ9HDC9 416 aa19.89■□□□□ 0.77
TPM4-201ENST00000300933 NKIRAS2Q9NYR9 191 aa19.89■□□□□ 0.77
TPM4-201ENST00000300933 A0A0B4J203 849 aa19.88■□□□□ 0.77
TPM4-201ENST00000300933 TVP23AA6NH52 213 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms