RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 MEP1BQ16820 701 aa12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 ARHGAP11BQ3KRB8 267 aa12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 OR6V1Q8N148 313 aa12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 SIRT6Q8N6T7 355 aa12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 LUZP4Q9P127 313 aa12.53□□□□□ -0.4
CHRFAM7A-201ENST00000299847 C17orf113A0A1B0GUU1 675 aa12.52□□□□□ -0.4
CHRFAM7A-201ENST00000299847 MAGEB1P43366 347 aa12.52□□□□□ -0.4
CHRFAM7A-201ENST00000299847 F2RL1P55085 397 aa12.52□□□□□ -0.4
CHRFAM7A-201ENST00000299847 DLX5P56178 289 aa12.52□□□□□ -0.4
CHRFAM7A-201ENST00000299847 PFN3P60673 137 aa12.52□□□□□ -0.4
CHRFAM7A-201ENST00000299847 GPLD1P80108 840 aa12.52□□□□□ -0.4
CHRFAM7A-201ENST00000299847 TLE1Q04724 770 aa12.52□□□□□ -0.4
CHRFAM7A-201ENST00000299847 TAZQ16635 292 aa12.52□□□□□ -0.4
CHRFAM7A-201ENST00000299847 CMPK2Q5EBM0 449 aa12.52□□□□□ -0.4
CHRFAM7A-201ENST00000299847 ARPC5LQ9BPX5 153 aa12.52□□□□□ -0.4
CHRFAM7A-201ENST00000299847 PDCD1LG2Q9BQ51 273 aa12.52□□□□□ -0.4
CHRFAM7A-201ENST00000299847 FOXQ1Q9C009 403 aa12.52□□□□□ -0.4
CHRFAM7A-201ENST00000299847 MTCH1Q9NZJ7 389 aa12.52□□□□□ -0.4
CHRFAM7A-201ENST00000299847 OSGIN2Q9Y236 505 aa12.52□□□□□ -0.4
CHRFAM7A-201ENST00000299847 TRAV36DV7A0A075B6V5 113 aa12.52□□□□□ -0.4
CHRFAM7A-201ENST00000299847 H7C1Q1 480 aa12.52□□□□□ -0.4
CHRFAM7A-201ENST00000299847 SF3B4Q15427 424 aaKnown RBP eCLIP12.52□□□□□ -0.4
CHRFAM7A-201ENST00000299847 ZNF74Q16587 644 aa12.52□□□□□ -0.4
CHRFAM7A-201ENST00000299847 GLYATL3Q5SZD4 288 aa12.52□□□□□ -0.4
CHRFAM7A-201ENST00000299847 YOD1Q5VVQ6 348 aaPredicted RBP12.52□□□□□ -0.4
CHRFAM7A-201ENST00000299847 KCNIP4Q6PIL6 250 aa12.52□□□□□ -0.4
CHRFAM7A-201ENST00000299847 ZNF439Q8NDP4 499 aa12.52□□□□□ -0.4
CHRFAM7A-201ENST00000299847 ZNF583Q96ND8 569 aa12.52□□□□□ -0.4
CHRFAM7A-201ENST00000299847 ARNT2Q9HBZ2 717 aa12.52□□□□□ -0.4
CHRFAM7A-201ENST00000299847 ACSS1Q9NUB1 689 aaPredicted RBP12.52□□□□□ -0.4
CHRFAM7A-201ENST00000299847 COA3Q9Y2R0 106 aaPredicted RBP12.52□□□□□ -0.4
CHRFAM7A-201ENST00000299847 BLACEA4D250 179 aa12.52□□□□□ -0.41
CHRFAM7A-201ENST00000299847 LCMT2O60294 686 aaKnown RBP12.52□□□□□ -0.41
CHRFAM7A-201ENST00000299847 MRPS10P82664 201 aaKnown RBP12.52□□□□□ -0.41
CHRFAM7A-201ENST00000299847 MFAP5Q13361 173 aa12.52□□□□□ -0.41
CHRFAM7A-201ENST00000299847 RDH10Q8IZV5 341 aa12.52□□□□□ -0.41
CHRFAM7A-201ENST00000299847 OR6T1Q8NGN1 323 aa12.52□□□□□ -0.41
CHRFAM7A-201ENST00000299847 INTS12Q96CB8 462 aaKnown RBP12.52□□□□□ -0.41
CHRFAM7A-201ENST00000299847 LCORQ96JN0 433 aaPredicted RBP12.52□□□□□ -0.41
CHRFAM7A-201ENST00000299847 ZIC5Q96T25 663 aa12.52□□□□□ -0.41
CHRFAM7A-201ENST00000299847 ATP13A2Q9NQ11 1180 aa12.52□□□□□ -0.41
CHRFAM7A-201ENST00000299847 PSORS1C1Q9UIG5 152 aa12.52□□□□□ -0.41
CHRFAM7A-201ENST00000299847 ARPC4-TTLL3A0A0A6YYG9 625 aa12.52□□□□□ -0.41
CHRFAM7A-201ENST00000299847 SGCEO43556 437 aa12.52□□□□□ -0.41
CHRFAM7A-201ENST00000299847 GPR137BO60478 399 aa12.52□□□□□ -0.41
CHRFAM7A-201ENST00000299847 KLKB1P03952 638 aa12.52□□□□□ -0.41
CHRFAM7A-201ENST00000299847 ZNF728P0DKX0 622 aa12.52□□□□□ -0.41
CHRFAM7A-201ENST00000299847 CAMK2BQ13554 666 aa12.52□□□□□ -0.41
CHRFAM7A-201ENST00000299847 MSMO1Q15800 293 aa12.52□□□□□ -0.41
CHRFAM7A-201ENST00000299847 PAPD4Q6PIY7 484 aaKnown RBP12.52□□□□□ -0.41
CHRFAM7A-201ENST00000299847 OR11L1Q8NGX0 322 aa12.52□□□□□ -0.41
CHRFAM7A-201ENST00000299847 MS4A8Q9BY19 250 aa12.52□□□□□ -0.41
CHRFAM7A-201ENST00000299847 C20orf85Q9H1P6 137 aa12.52□□□□□ -0.41
CHRFAM7A-201ENST00000299847 CHST11Q9NPF2 352 aa12.52□□□□□ -0.41
CHRFAM7A-201ENST00000299847 GPR173Q9NS66 373 aa12.52□□□□□ -0.41
CHRFAM7A-201ENST00000299847 ANKRD61A6NGH8 418 aa12.52□□□□□ -0.41
CHRFAM7A-201ENST00000299847 SLC2A10O95528 541 aa12.52□□□□□ -0.41
CHRFAM7A-201ENST00000299847 GSTP1P09211 210 aaKnown RBP12.52□□□□□ -0.41
CHRFAM7A-201ENST00000299847 CHRNB4P30926 498 aa12.52□□□□□ -0.41
CHRFAM7A-201ENST00000299847 ELLP55199 621 aaPredicted RBP12.52□□□□□ -0.41
CHRFAM7A-201ENST00000299847 GABREP78334 506 aa12.52□□□□□ -0.41
CHRFAM7A-201ENST00000299847 PMPCAQ10713 525 aa12.52□□□□□ -0.41
CHRFAM7A-201ENST00000299847 FAPQ12884 760 aa12.52□□□□□ -0.41
CHRFAM7A-201ENST00000299847 GLYR1Q49A26 553 aaPredicted RBP12.52□□□□□ -0.41
CHRFAM7A-201ENST00000299847 PARM1Q6UWI2 310 aa12.52□□□□□ -0.41
CHRFAM7A-201ENST00000299847 AGBL5Q8NDL9 886 aa12.52□□□□□ -0.41
CHRFAM7A-201ENST00000299847 OR56B1Q8NGI3 324 aa12.52□□□□□ -0.41
CHRFAM7A-201ENST00000299847 SLC39A13Q96H72 371 aa12.52□□□□□ -0.41
CHRFAM7A-201ENST00000299847 ERVMER34-1Q9H9K5 563 aa12.52□□□□□ -0.41
CHRFAM7A-201ENST00000299847 FBXO7Q9Y3I1 522 aa12.52□□□□□ -0.41
CHRFAM7A-201ENST00000299847 TMEM189-UBE2V1I3L0A0 370 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 RAB40ALP0C0E4 278 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 EMP3P54852 163 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 ALKBH1Q13686 389 aaKnown RBP12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 PLK5Q496M5 336 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 PKDCCQ504Y2 493 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 OR8G2PQ6IF36 304 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 RAB40AQ8WXH6 277 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 CHST8Q9H2A9 424 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 TGM6O95932 706 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 SCG5P05408 212 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 GLI4P10075 376 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 RBPJQ06330 500 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 OPCMLQ14982 345 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 PRTGQ2VWP7 1150 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 ADPRMQ3LIE5 342 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 DMRTC1Q5HYR2 192 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 OR2B11Q5JQS5 317 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 ZNF813Q6ZN06 617 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 HPSE2Q8WWQ2 592 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 PATE1Q8WXA2 126 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 DEFB127Q9H1M4 99 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 PATZ1Q9HBE1 687 aaKnown RBP12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 IGHV3-15A0A0B4J1V0 119 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 BHLHE40O14503 412 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 OR13C7P0DN81 318 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 DEFA4P12838 97 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 TCN2P20062 427 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 LIM2P55344 173 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 P2RX3P56373 397 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms