RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 B3GAT2Q9NPZ5 323 aa13.72□□□□□ -0.21
TMEM41A-201ENST00000296254 MED29Q9NX70 200 aa13.72□□□□□ -0.21
TMEM41A-201ENST00000296254 MYEF2Q9P2K5 600 aaKnown RBP13.72□□□□□ -0.21
TMEM41A-201ENST00000296254 TESQ9UGI8 421 aaKnown RBP13.72□□□□□ -0.21
TMEM41A-201ENST00000296254 GRIP1Q9Y3R0 1128 aa13.72□□□□□ -0.21
TMEM41A-201ENST00000296254 NOX1Q9Y5S8 564 aa13.72□□□□□ -0.21
TMEM41A-201ENST00000296254 CLIC1O00299 241 aa13.71□□□□□ -0.21
TMEM41A-201ENST00000296254 WNT9BO14905 357 aa13.71□□□□□ -0.21
TMEM41A-201ENST00000296254 NCR1O76036 304 aa13.71□□□□□ -0.21
TMEM41A-201ENST00000296254 RAB36O95755 333 aa13.71□□□□□ -0.21
TMEM41A-201ENST00000296254 BGLAPP02818 100 aa13.71□□□□□ -0.21
TMEM41A-201ENST00000296254 SEC24CP53992 1094 aa13.71□□□□□ -0.21
TMEM41A-201ENST00000296254 AQP5P55064 265 aa13.71□□□□□ -0.21
TMEM41A-201ENST00000296254 NCALDP61601 193 aa13.71□□□□□ -0.21
TMEM41A-201ENST00000296254 GALK2Q01415 458 aa13.71□□□□□ -0.21
TMEM41A-201ENST00000296254 PUDPQ08623 228 aa13.71□□□□□ -0.21
TMEM41A-201ENST00000296254 CEP85LQ5SZL2 805 aa13.71□□□□□ -0.21
TMEM41A-201ENST00000296254 GKAP1Q5VSY0 366 aaPredicted RBP13.71□□□□□ -0.21
TMEM41A-201ENST00000296254 ULK3Q6PHR2 472 aa13.71□□□□□ -0.21
TMEM41A-201ENST00000296254 SHQ1Q6PI26 577 aaKnown RBP13.71□□□□□ -0.21
TMEM41A-201ENST00000296254 DHRS4L2Q6PKH6 230 aa13.71□□□□□ -0.21
TMEM41A-201ENST00000296254 NHLRC1Q6VVB1 395 aa13.71□□□□□ -0.21
TMEM41A-201ENST00000296254 LRP11Q86VZ4 500 aa13.71□□□□□ -0.21
TMEM41A-201ENST00000296254 YIPF5Q969M3 257 aa13.71□□□□□ -0.21
TMEM41A-201ENST00000296254 TRIM44Q96DX7 344 aaPredicted RBP13.71□□□□□ -0.21
TMEM41A-201ENST00000296254 OR52B2Q96RD2 323 aa13.71□□□□□ -0.21
TMEM41A-201ENST00000296254 EPYCQ99645 322 aa13.71□□□□□ -0.21
TMEM41A-201ENST00000296254 FOXB1Q99853 325 aa13.71□□□□□ -0.21
TMEM41A-201ENST00000296254 ASPNQ9BXN1 380 aa13.71□□□□□ -0.21
TMEM41A-201ENST00000296254 ZNF275Q9NSD4 429 aaPredicted RBP13.71□□□□□ -0.21
TMEM41A-201ENST00000296254 FBXL3Q9UKT7 428 aa13.71□□□□□ -0.21
TMEM41A-201ENST00000296254 FZR1Q9UM11 496 aa13.71□□□□□ -0.21
TMEM41A-201ENST00000296254 POFUT2Q9Y2G5 429 aa13.71□□□□□ -0.21
TMEM41A-201ENST00000296254 MGAM2Q2M2H8 2515 aa13.7□□□□□ -0.22
TMEM41A-201ENST00000296254 MEGF8Q7Z7M0 2845 aa13.7□□□□□ -0.22
TMEM41A-201ENST00000296254 A0A0B4J2E0 115 aa13.7□□□□□ -0.22
TMEM41A-201ENST00000296254 A0A1B0GX12 115 aa13.7□□□□□ -0.22
TMEM41A-201ENST00000296254 UBDO15205 165 aa13.7□□□□□ -0.22
TMEM41A-201ENST00000296254 RP2O75695 350 aa13.7□□□□□ -0.22
TMEM41A-201ENST00000296254 UBL3O95164 117 aa13.7□□□□□ -0.22
TMEM41A-201ENST00000296254 GAAP10253 952 aa13.7□□□□□ -0.22
TMEM41A-201ENST00000296254 ARAFP10398 606 aa13.7□□□□□ -0.22
TMEM41A-201ENST00000296254 COL8A2P25067 703 aa13.7□□□□□ -0.22
TMEM41A-201ENST00000296254 COMPP49747 757 aaPredicted RBP13.7□□□□□ -0.22
TMEM41A-201ENST00000296254 TMEM33P57088 247 aa13.7□□□□□ -0.22
TMEM41A-201ENST00000296254 RAB1AP62820 205 aa13.7□□□□□ -0.22
TMEM41A-201ENST00000296254 CAMK2DQ13557 499 aa13.7□□□□□ -0.22
TMEM41A-201ENST00000296254 GLIPR1L2Q4G1C9 344 aa13.7□□□□□ -0.22
TMEM41A-201ENST00000296254 SLC2A7Q6PXP3 512 aa13.7□□□□□ -0.22
TMEM41A-201ENST00000296254 SNX32Q86XE0 403 aa13.7□□□□□ -0.22
TMEM41A-201ENST00000296254 MIER2Q8N344 545 aa13.7□□□□□ -0.22
TMEM41A-201ENST00000296254 OR6N1Q8NGY5 312 aa13.7□□□□□ -0.22
TMEM41A-201ENST00000296254 OR51F2Q8NH61 342 aa13.7□□□□□ -0.22
TMEM41A-201ENST00000296254 NFKBIDQ8NI38 313 aa13.7□□□□□ -0.22
TMEM41A-201ENST00000296254 MGARPQ8TDB4 240 aa13.7□□□□□ -0.22
TMEM41A-201ENST00000296254 SLC47A1Q96FL8 570 aa13.7□□□□□ -0.22
TMEM41A-201ENST00000296254 TXNDC15Q96J42 360 aa13.7□□□□□ -0.22
TMEM41A-201ENST00000296254 MOGAT1Q96PD6 335 aa13.7□□□□□ -0.22
TMEM41A-201ENST00000296254 ZNF385DQ9H6B1 395 aa13.7□□□□□ -0.22
TMEM41A-201ENST00000296254 MRPL39Q9NYK5 338 aaKnown RBP13.7□□□□□ -0.22
TMEM41A-201ENST00000296254 SLC25A37Q9NYZ2 338 aa13.7□□□□□ -0.22
TMEM41A-201ENST00000296254 TREM2Q9NZC2 230 aa13.7□□□□□ -0.22
TMEM41A-201ENST00000296254 SLC7A8Q9UHI5 535 aa13.7□□□□□ -0.22
TMEM41A-201ENST00000296254 A0A1W2PPW3 197 aa13.69□□□□□ -0.22
TMEM41A-201ENST00000296254 TMEM120BA0PK00 339 aa13.69□□□□□ -0.22
TMEM41A-201ENST00000296254 TPST1O60507 370 aa13.69□□□□□ -0.22
TMEM41A-201ENST00000296254 NAT2P11245 290 aa13.69□□□□□ -0.22
TMEM41A-201ENST00000296254 RGS8P57771 180 aaPredicted RBP13.69□□□□□ -0.22
TMEM41A-201ENST00000296254 ACTG1P63261 375 aa13.69□□□□□ -0.22
TMEM41A-201ENST00000296254 PMS2P3Q13401 168 aa13.69□□□□□ -0.22
TMEM41A-201ENST00000296254 GCNT6Q5T4J0 391 aa13.69□□□□□ -0.22
TMEM41A-201ENST00000296254 PXKQ7Z7A4 578 aa13.69□□□□□ -0.22
TMEM41A-201ENST00000296254 KRT73Q86Y46 540 aa13.69□□□□□ -0.22
TMEM41A-201ENST00000296254 ZNF584Q8IVC4 421 aa13.69□□□□□ -0.22
TMEM41A-201ENST00000296254 MSRB3Q8IXL7 192 aa13.69□□□□□ -0.22
TMEM41A-201ENST00000296254 C10orf111Q8N326 155 aa13.69□□□□□ -0.22
TMEM41A-201ENST00000296254 GOLGA6L1Q8N7Z2 621 aa13.69□□□□□ -0.22
TMEM41A-201ENST00000296254 ZNF418Q8TF45 676 aaPredicted RBP13.69□□□□□ -0.22
TMEM41A-201ENST00000296254 ZBTB9Q96C00 473 aa13.69□□□□□ -0.22
TMEM41A-201ENST00000296254 LRRC37BQ96QE4 947 aa13.69□□□□□ -0.22
TMEM41A-201ENST00000296254 SPATA5L1Q9BVQ7 753 aa13.69□□□□□ -0.22
TMEM41A-201ENST00000296254 ZNF416Q9BWM5 594 aa13.69□□□□□ -0.22
TMEM41A-201ENST00000296254 SELENONQ9NZV5 590 aa13.69□□□□□ -0.22
TMEM41A-201ENST00000296254 ZNF346Q9UL40 294 aaKnown RBP13.69□□□□□ -0.22
TMEM41A-201ENST00000296254 TRAV20A0A0B4J274 112 aa13.68□□□□□ -0.22
TMEM41A-201ENST00000296254 ZNF726A6NNF4 738 aa13.68□□□□□ -0.22
TMEM41A-201ENST00000296254 LRRN3E7EW58 273 aa13.68□□□□□ -0.22
TMEM41A-201ENST00000296254 PLPP3O14495 311 aa13.68□□□□□ -0.22
TMEM41A-201ENST00000296254 PPIHO43447 177 aaKnown RBP13.68□□□□□ -0.22
TMEM41A-201ENST00000296254 WIPF1O43516 503 aa13.68□□□□□ -0.22
TMEM41A-201ENST00000296254 SPRY1O43609 319 aaPredicted RBP13.68□□□□□ -0.22
TMEM41A-201ENST00000296254 SERPINI2O75830 405 aa13.68□□□□□ -0.22
TMEM41A-201ENST00000296254 PNPP00491 289 aa13.68□□□□□ -0.22
TMEM41A-201ENST00000296254 LSP1P33241 339 aa13.68□□□□□ -0.22
TMEM41A-201ENST00000296254 CSNK1A1P48729 337 aa13.68□□□□□ -0.22
TMEM41A-201ENST00000296254 HILS1P60008 231 aa13.68□□□□□ -0.22
TMEM41A-201ENST00000296254 LMO4P61968 165 aa13.68□□□□□ -0.22
TMEM41A-201ENST00000296254 CDK6Q00534 326 aa13.68□□□□□ -0.22
TMEM41A-201ENST00000296254 RAB39AQ14964 217 aa13.68□□□□□ -0.22
TMEM41A-201ENST00000296254 OR1Q1Q15612 314 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms