RNA–Protein interactions for RNA: ENST00000295550.8

COL6A3-201, Transcript of collagen type VI alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A3, Length 10,749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-201ENST00000295550 CELF2-AS1Q8N7Q2 184 aa9.16□□□□□ -0.94
COL6A3-201ENST00000295550 OR56B1Q8NGI3 324 aa9.16□□□□□ -0.94
COL6A3-201ENST00000295550 CREBZFQ9NS37 354 aa9.16□□□□□ -0.94
COL6A3-201ENST00000295550 HEMK1Q9Y5R4 338 aaPredicted RBP9.16□□□□□ -0.94
COL6A3-201ENST00000295550 TMEM11P17152 192 aa9.16□□□□□ -0.94
COL6A3-201ENST00000295550 RUNX2Q13950 521 aa9.16□□□□□ -0.94
COL6A3-201ENST00000295550 MEPCEQ7L2J0 689 aaKnown RBP9.16□□□□□ -0.94
COL6A3-201ENST00000295550 KLHDC8AQ8IYD2 350 aa9.16□□□□□ -0.94
COL6A3-201ENST00000295550 OR14L1PQ8NHC6 308 aa9.16□□□□□ -0.94
COL6A3-201ENST00000295550 RTP3Q9BQQ7 232 aa9.16□□□□□ -0.94
COL6A3-201ENST00000295550 TMPRSS5Q9H3S3 457 aa9.16□□□□□ -0.94
COL6A3-201ENST00000295550 BET1O15155 118 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 GYPBP06028 91 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 ELOCQ15369 112 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 MEP1BQ16820 701 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 ADAMTS16Q8TE57 1224 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 NRIP3Q9NQ35 241 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 GMPR2Q9P2T1 348 aaKnown RBP9.15□□□□□ -0.94
COL6A3-201ENST00000295550 PSORS1C1Q9UIG5 152 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 BTBD17A6NE02 478 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 IGLON5A6NGN9 336 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 TRAPPC2LH3BP13 241 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 IGLV3-25P01717 112 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 KDF1Q8NAX2 398 aaPredicted RBP9.15□□□□□ -0.94
COL6A3-201ENST00000295550 SDR9C7Q8NEX9 313 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 KLHDC7BQ96G42 594 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 ADAM29Q9UKF5 820 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 OSGIN2Q9Y236 505 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 C1orf105O95561 183 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 SCG5P05408 212 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 JMJD7P0C870 316 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 IL1RNP18510 177 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 SNCAP37840 140 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 GDNFP39905 211 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 TESK1Q15569 626 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 GINS3Q9BRX5 216 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 CENPOQ9BU64 300 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 HBA1P69905 142 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 GPR176Q14439 515 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 Q6ZSR9 355 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 FCRLAQ7L513 359 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 SECTM1Q8WVN6 248 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 WDR92Q96MX6 357 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 CHRDQ9H2X0 955 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 ZCCHC4Q9H5U6 513 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 FBXO8Q9NRD0 319 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 HHLA2Q9UM44 414 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 WIF1Q9Y5W5 379 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 HSPB6O14558 160 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 CTDSP2O14595 271 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 FRS3O43559 492 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 HCCSP53701 268 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 EMP2P54851 167 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 PPP1R35Q8TAP8 253 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 CMTM2Q8TAZ6 248 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 SCARB1Q8WTV0 552 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 SFT2D1Q8WV19 159 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 ST8SIA4Q92187 359 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 FAM103A1Q9BTL3 118 aaKnown RBP9.15□□□□□ -0.94
COL6A3-201ENST00000295550 C1QTNF2Q9BXJ5 285 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 EVA1AQ9H8M9 152 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 CLCF1Q9UBD9 225 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 HS3ST2Q9Y278 367 aa9.15□□□□□ -0.94
COL6A3-201ENST00000295550 PPP5D1E7EU14 171 aa9.15□□□□□ -0.95
COL6A3-201ENST00000295550 SLC43A1O75387 559 aa9.15□□□□□ -0.95
COL6A3-201ENST00000295550 CBX7O95931 251 aa9.15□□□□□ -0.95
COL6A3-201ENST00000295550 RANP62826 216 aaKnown RBP9.15□□□□□ -0.95
COL6A3-201ENST00000295550 BAK1Q16611 211 aa9.15□□□□□ -0.95
COL6A3-201ENST00000295550 SMN1Q16637 294 aaKnown RBP9.15□□□□□ -0.95
COL6A3-201ENST00000295550 RPL22L1Q6P5R6 122 aaKnown RBP9.15□□□□□ -0.95
COL6A3-201ENST00000295550 OR5M8Q8NGP6 311 aa9.15□□□□□ -0.95
COL6A3-201ENST00000295550 DTD2Q96FN9 168 aa9.15□□□□□ -0.95
COL6A3-201ENST00000295550 METTL15A6NJ78 407 aa9.15□□□□□ -0.95
COL6A3-201ENST00000295550 UBL3O95164 117 aa9.15□□□□□ -0.95
COL6A3-201ENST00000295550 FAM26DQ5JW98 314 aa9.15□□□□□ -0.95
COL6A3-201ENST00000295550 ARV1Q9H2C2 271 aa9.15□□□□□ -0.95
COL6A3-201ENST00000295550 ZNF331Q9NQX6 463 aaPredicted RBP9.15□□□□□ -0.95
COL6A3-201ENST00000295550 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.15□□□□□ -0.95
COL6A3-201ENST00000295550 CIDEAO60543 219 aa9.15□□□□□ -0.95
COL6A3-201ENST00000295550 ADAMTS4O75173 837 aa9.15□□□□□ -0.95
COL6A3-201ENST00000295550 GCH1P30793 250 aa9.15□□□□□ -0.95
COL6A3-201ENST00000295550 SLC1A3P43003 542 aa9.15□□□□□ -0.95
COL6A3-201ENST00000295550 GPLD1P80108 840 aa9.15□□□□□ -0.95
COL6A3-201ENST00000295550 TEX37Q96LM6 180 aa9.15□□□□□ -0.95
COL6A3-201ENST00000295550 SIAEQ9HAT2 523 aa9.15□□□□□ -0.95
COL6A3-201ENST00000295550 PCDHGA1Q9Y5H4 931 aa9.15□□□□□ -0.95
COL6A3-201ENST00000295550 KLK4Q9Y5K2 254 aa9.15□□□□□ -0.95
COL6A3-201ENST00000295550 SLC6A8P48029 635 aa9.14□□□□□ -0.95
COL6A3-201ENST00000295550 RAB7AP51149 207 aa9.14□□□□□ -0.95
COL6A3-201ENST00000295550 PMPCAQ10713 525 aa9.14□□□□□ -0.95
COL6A3-201ENST00000295550 C3orf38Q5JPI3 329 aa9.14□□□□□ -0.95
COL6A3-201ENST00000295550 CLEC9AQ6UXN8 241 aa9.14□□□□□ -0.95
COL6A3-201ENST00000295550 BPIFA2Q96DR5 249 aa9.14□□□□□ -0.95
COL6A3-201ENST00000295550 ANKRD19PQ9H560 264 aa9.14□□□□□ -0.95
COL6A3-201ENST00000295550 STEAP1Q9UHE8 339 aa9.14□□□□□ -0.95
COL6A3-201ENST00000295550 ZNF443Q9Y2A4 671 aaPredicted RBP9.14□□□□□ -0.95
COL6A3-201ENST00000295550 PLSCR5A0PG75 271 aa9.14□□□□□ -0.95
COL6A3-201ENST00000295550 GABARAPH6UMI1 98 aa9.14□□□□□ -0.95
COL6A3-201ENST00000295550 NTF3P20783 257 aa9.14□□□□□ -0.95
COL6A3-201ENST00000295550 F2RL1P55085 397 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms