RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 ING1Q9UK53 422 aaPredicted RBP12.66□□□□□ -0.38
NXF1-201ENST00000294172 VDAC3Q9Y277 283 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 ZNF281Q9Y2X9 895 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 MEIOCA2RUB1 952 aa12.65□□□□□ -0.38
NXF1-201ENST00000294172 NOTOA8MTQ0 251 aa12.65□□□□□ -0.38
NXF1-201ENST00000294172 LAMTOR5O43504 91 aa12.65□□□□□ -0.38
NXF1-201ENST00000294172 AHSA1O95433 338 aa12.65□□□□□ -0.38
NXF1-201ENST00000294172 UCHL1P09936 223 aa12.65□□□□□ -0.38
NXF1-201ENST00000294172 SNRPBP14678 240 aaKnown RBP12.65□□□□□ -0.38
NXF1-201ENST00000294172 ATF1P18846 271 aa12.65□□□□□ -0.38
NXF1-201ENST00000294172 ZNF684Q5T5D7 378 aa12.65□□□□□ -0.38
NXF1-201ENST00000294172 EEF1A1P5Q5VTE0 462 aa12.65□□□□□ -0.38
NXF1-201ENST00000294172 LIPNQ5VXI9 398 aa12.65□□□□□ -0.38
NXF1-201ENST00000294172 SLC6A19Q695T7 634 aa12.65□□□□□ -0.38
NXF1-201ENST00000294172 TMEM53Q6P2H8 277 aa12.65□□□□□ -0.38
NXF1-201ENST00000294172 MAMSTRQ6ZN01 415 aa12.65□□□□□ -0.38
NXF1-201ENST00000294172 GLCCI1Q86VQ1 547 aa12.65□□□□□ -0.38
NXF1-201ENST00000294172 OR5H6Q8NGV6 325 aa12.65□□□□□ -0.38
NXF1-201ENST00000294172 WDR77Q9BQA1 342 aaPredicted RBP12.65□□□□□ -0.38
NXF1-201ENST00000294172 WACQ9BTA9 647 aa12.65□□□□□ -0.38
NXF1-201ENST00000294172 SLC25A18Q9H1K4 315 aa12.65□□□□□ -0.38
NXF1-201ENST00000294172 ZNF221Q9UK13 617 aa12.65□□□□□ -0.38
NXF1-201ENST00000294172 ITGB1BP2Q9UKP3 347 aa12.65□□□□□ -0.38
NXF1-201ENST00000294172 B4DXG7 233 aa12.65□□□□□ -0.39
NXF1-201ENST00000294172 ADAM10O14672 748 aa12.65□□□□□ -0.39
NXF1-201ENST00000294172 GPRIN2O60269 458 aa12.65□□□□□ -0.39
NXF1-201ENST00000294172 NPIPB7O75200 414 aa12.65□□□□□ -0.39
NXF1-201ENST00000294172 PRKAR1AP10644 381 aa12.65□□□□□ -0.39
NXF1-201ENST00000294172 EPXP11678 715 aa12.65□□□□□ -0.39
NXF1-201ENST00000294172 PSKH1P11801 424 aa12.65□□□□□ -0.39
NXF1-201ENST00000294172 SRMP19623 302 aa12.65□□□□□ -0.39
NXF1-201ENST00000294172 NPR2P20594 1047 aa12.65□□□□□ -0.39
NXF1-201ENST00000294172 MAP2K3P46734 347 aa12.65□□□□□ -0.39
NXF1-201ENST00000294172 SF3B4Q15427 424 aaKnown RBP eCLIP12.65□□□□□ -0.392e-6■■□□□ 14.4
NXF1-201ENST00000294172 CEP78Q5JTW2 689 aa12.65□□□□□ -0.39
NXF1-201ENST00000294172 CPEB2Q7Z5Q1 589 aaKnown RBP12.65□□□□□ -0.39
NXF1-201ENST00000294172 CDC20BQ86Y33 519 aa12.65□□□□□ -0.39
NXF1-201ENST00000294172 MISPQ8IVT2 679 aa12.65□□□□□ -0.39
NXF1-201ENST00000294172 KDM8Q8N371 416 aa12.65□□□□□ -0.39
NXF1-201ENST00000294172 ZNF417Q8TAU3 575 aa12.65□□□□□ -0.39
NXF1-201ENST00000294172 NUBPLQ8TB37 319 aa12.65□□□□□ -0.39
NXF1-201ENST00000294172 ZNF486Q96H40 463 aaPredicted RBP12.65□□□□□ -0.39
NXF1-201ENST00000294172 UBL7Q96S82 380 aaPredicted RBP12.65□□□□□ -0.39
NXF1-201ENST00000294172 ZNF587Q96SQ5 575 aaPredicted RBP12.65□□□□□ -0.39
NXF1-201ENST00000294172 TSPAN10Q9H1Z9 355 aaPredicted RBP12.65□□□□□ -0.39
NXF1-201ENST00000294172 MOV10Q9HCE1 1003 aaKnown RBP12.65□□□□□ -0.39
NXF1-201ENST00000294172 KLRF1Q9NZS2 232 aa12.65□□□□□ -0.39
NXF1-201ENST00000294172 TEKT2Q9UIF3 430 aa12.65□□□□□ -0.39
NXF1-201ENST00000294172 A0A1B0GTH9 108 aa12.64□□□□□ -0.39
NXF1-201ENST00000294172 TMEM200CA6NKL6 621 aa12.64□□□□□ -0.39
NXF1-201ENST00000294172 ZNF879B4DU55 563 aa12.64□□□□□ -0.39
NXF1-201ENST00000294172 MEN1O00255 615 aa12.64□□□□□ -0.39
NXF1-201ENST00000294172 FZD7O75084 574 aa12.64□□□□□ -0.39
NXF1-201ENST00000294172 HLA-DQB1P01920 261 aa12.64□□□□□ -0.39
NXF1-201ENST00000294172 CD1AP06126 327 aa12.64□□□□□ -0.39
NXF1-201ENST00000294172 IL11P20809 199 aa12.64□□□□□ -0.39
NXF1-201ENST00000294172 PITPNBP48739 271 aa12.64□□□□□ -0.39
NXF1-201ENST00000294172 RPL27P61353 136 aaKnown RBP12.64□□□□□ -0.39
NXF1-201ENST00000294172 C17orf67Q0P5P2 114 aa12.64□□□□□ -0.39
NXF1-201ENST00000294172 RIN1Q13671 783 aa12.64□□□□□ -0.39
NXF1-201ENST00000294172 MZT2BQ6NZ67 158 aa12.64□□□□□ -0.39
NXF1-201ENST00000294172 ASB18Q6ZVZ8 466 aa12.64□□□□□ -0.39
NXF1-201ENST00000294172 RDH10Q8IZV5 341 aa12.64□□□□□ -0.39
NXF1-201ENST00000294172 ZNF433Q8N7K0 673 aaPredicted RBP12.64□□□□□ -0.39
NXF1-201ENST00000294172 OR6F1Q8NGZ6 308 aa12.64□□□□□ -0.39
NXF1-201ENST00000294172 TMEM234Q8WY98 164 aa12.64□□□□□ -0.39
NXF1-201ENST00000294172 RNF166Q96A37 237 aaPredicted RBP12.64□□□□□ -0.39
NXF1-201ENST00000294172 GFM1Q96RP9 751 aaKnown RBP12.64□□□□□ -0.39
NXF1-201ENST00000294172 INTS14Q96SY0 518 aa12.64□□□□□ -0.39
NXF1-201ENST00000294172 SPSB2Q99619 263 aa12.64□□□□□ -0.39
NXF1-201ENST00000294172 ADAMTS9Q9P2N4 1935 aa12.64□□□□□ -0.39
NXF1-201ENST00000294172 PRSS37A4D1T9 235 aa12.63□□□□□ -0.39
NXF1-201ENST00000294172 VSTM2BA6NLU5 285 aa12.63□□□□□ -0.39
NXF1-201ENST00000294172 A8MV72 311 aaPredicted RBP12.63□□□□□ -0.39
NXF1-201ENST00000294172 H3BSH0 61 aa12.63□□□□□ -0.39
NXF1-201ENST00000294172 PLPP3O14495 311 aa12.63□□□□□ -0.39
NXF1-201ENST00000294172 PIN1P1O15428 100 aa12.63□□□□□ -0.39
NXF1-201ENST00000294172 LYRM1O43325 122 aa12.63□□□□□ -0.39
NXF1-201ENST00000294172 SLC16A7O60669 478 aa12.63□□□□□ -0.39
NXF1-201ENST00000294172 UPK3AO75631 287 aa12.63□□□□□ -0.39
NXF1-201ENST00000294172 TDGF1P13385 188 aa12.63□□□□□ -0.39
NXF1-201ENST00000294172 TCEA1P23193 301 aaKnown RBP12.63□□□□□ -0.39
NXF1-201ENST00000294172 RBMS1P29558 406 aaKnown RBP12.63□□□□□ -0.39
NXF1-201ENST00000294172 RCVRNP35243 200 aa12.63□□□□□ -0.39
NXF1-201ENST00000294172 MELKQ14680 651 aa12.63□□□□□ -0.39
NXF1-201ENST00000294172 ATAD3CQ5T2N8 411 aa12.63□□□□□ -0.39
NXF1-201ENST00000294172 ZNF385CQ66K41 422 aaPredicted RBP12.63□□□□□ -0.39
NXF1-201ENST00000294172 ARSKQ6UWY0 536 aa12.63□□□□□ -0.39
NXF1-201ENST00000294172 LRRC69Q6ZNQ3 347 aa12.63□□□□□ -0.39
NXF1-201ENST00000294172 OR5L2Q8NGL0 311 aa12.63□□□□□ -0.39
NXF1-201ENST00000294172 ZNF671Q8TAW3 534 aa12.63□□□□□ -0.39
NXF1-201ENST00000294172 RGP1Q92546 391 aaPredicted RBP12.63□□□□□ -0.39
NXF1-201ENST00000294172 KLHL15Q96M94 604 aa12.63□□□□□ -0.39
NXF1-201ENST00000294172 RNF121Q9H920 327 aa12.63□□□□□ -0.39
NXF1-201ENST00000294172 DDX28Q9NUL7 540 aaKnown RBP12.63□□□□□ -0.39
NXF1-201ENST00000294172 MRPS7Q9Y2R9 242 aaKnown RBP12.63□□□□□ -0.39
NXF1-201ENST00000294172 FAM240BA0A1B0GVZ2 78 aa12.63□□□□□ -0.39
NXF1-201ENST00000294172 ANKUB1A6NFN9 424 aa12.63□□□□□ -0.39
NXF1-201ENST00000294172 SHISA8B8ZZ34 492 aa12.63□□□□□ -0.39
NXF1-201ENST00000294172 TRIM3O75382 744 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms