RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 ADGRE4PQ86SQ3 457 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 SLC25A19Q9HC21 320 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 HSPB2A8KAH6 182 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 PRRT4C9JH25 899 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 MCRIP1C9JLW8 97 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 E9PI62 339 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 H0YIG0 161 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 H7C1C5 153 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 SLC34A2O95436 690 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 OPN1LWP04000 364 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 CALCBP10092 127 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 CPT2P23786 658 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 BTG1P62324 171 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 LCN6P62502 163 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 USF2Q15853 346 aaPredicted RBP11.78□□□□□ -0.52
PTCD1-201ENST00000292478 HSPB2Q16082 182 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 LINC01599Q8WXQ3 324 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 WBP2Q969T9 261 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 SLC35A4Q96G79 324 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 TMEM100Q9NV29 134 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 LUZP4Q9P127 313 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 OSGIN1Q9UJX0 560 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 RAF1P04049 648 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 ATP1B1P05026 303 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 SRMP19623 302 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 CARD18P57730 90 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 SLC25A46Q96AG3 418 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 MSI2Q96DH6 328 aaKnown RBP11.78□□□□□ -0.52
PTCD1-201ENST00000292478 SDHAF2Q9NX18 166 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 OR52A1Q9UKL2 312 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 TSPAN11A1L157 253 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 PRAMEF27A3QJZ7 478 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 TCRBP04435 133 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 CATR1Q13166 79 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 MEP1BQ16820 701 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 PRAMEF9Q5VWM5 478 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 OR14A2Q96R54 314 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 TEAD3Q99594 435 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 SLC25A21Q9BQT8 299 aaPredicted RBP11.78□□□□□ -0.52
PTCD1-201ENST00000292478 OBP2BQ9NPH6 170 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 KCND3Q9UK17 655 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 EMC9Q9Y3B6 208 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 A0A1W2PS29 197 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 ZNF749O43361 778 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 PLRG1O43660 514 aaKnown RBP11.78□□□□□ -0.52
PTCD1-201ENST00000292478 ZNF780AO75290 641 aaPredicted RBP11.78□□□□□ -0.52
PTCD1-201ENST00000292478 ACHEP22303 614 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 SLC14A1Q13336 389 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 GRAMD2AQ8IUY3 354 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 OR2L13Q8N349 312 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 BCL7CQ8WUZ0 217 aaPredicted RBP11.78□□□□□ -0.52
PTCD1-201ENST00000292478 MALSU1Q96EH3 234 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 ZNF419Q96HQ0 510 aaPredicted RBP11.78□□□□□ -0.52
PTCD1-201ENST00000292478 SNX18Q96RF0 628 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 SLC19A3Q9BZV2 496 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 IL21Q9HBE4 155 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 SBK3P0C264 359 aa11.77□□□□□ -0.52
PTCD1-201ENST00000292478 ITGB8P26012 769 aa11.77□□□□□ -0.52
PTCD1-201ENST00000292478 LUMP51884 338 aaPredicted RBP11.77□□□□□ -0.52
PTCD1-201ENST00000292478 ESPNLQ6ZVH7 1005 aa11.77□□□□□ -0.52
PTCD1-201ENST00000292478 MARCH3Q86UD3 253 aa11.77□□□□□ -0.52
PTCD1-201ENST00000292478 WDR5BQ86VZ2 330 aa11.77□□□□□ -0.52
PTCD1-201ENST00000292478 LYSMD2Q8IV50 215 aa11.77□□□□□ -0.52
PTCD1-201ENST00000292478 LRRC18Q8N456 261 aa11.77□□□□□ -0.52
PTCD1-201ENST00000292478 PRR18Q8N4B5 295 aa11.77□□□□□ -0.52
PTCD1-201ENST00000292478 GJC3Q8NFK1 279 aa11.77□□□□□ -0.52
PTCD1-201ENST00000292478 SLCO4A1Q96BD0 722 aa11.77□□□□□ -0.52
PTCD1-201ENST00000292478 MVB12AQ96EY5 273 aa11.77□□□□□ -0.52
PTCD1-201ENST00000292478 NMNAT2Q9BZQ4 307 aa11.77□□□□□ -0.52
PTCD1-201ENST00000292478 CMC2Q9NRP2 79 aa11.77□□□□□ -0.52
PTCD1-201ENST00000292478 ADAMTS7Q9UKP4 1686 aa11.77□□□□□ -0.52
PTCD1-201ENST00000292478 ZNF814B7Z6K7 855 aa11.77□□□□□ -0.53
PTCD1-201ENST00000292478 SNAPINO95295 136 aa11.77□□□□□ -0.53
PTCD1-201ENST00000292478 CHRM2P08172 466 aa11.77□□□□□ -0.53
PTCD1-201ENST00000292478 SBK2P0C263 348 aa11.77□□□□□ -0.53
PTCD1-201ENST00000292478 CPEP16870 476 aa11.77□□□□□ -0.53
PTCD1-201ENST00000292478 IL2RGP31785 369 aa11.77□□□□□ -0.53
PTCD1-201ENST00000292478 BSGP35613 385 aa11.77□□□□□ -0.53
PTCD1-201ENST00000292478 CCR9P51686 369 aa11.77□□□□□ -0.53
PTCD1-201ENST00000292478 ZNF133P52736 654 aaPredicted RBP11.77□□□□□ -0.53
PTCD1-201ENST00000292478 STK11Q15831 433 aa11.77□□□□□ -0.53
PTCD1-201ENST00000292478 LAT2Q9GZY6 243 aa11.77□□□□□ -0.53
PTCD1-201ENST00000292478 METTL17Q9H7H0 456 aaPredicted RBP11.77□□□□□ -0.53
PTCD1-201ENST00000292478 RANGRFQ9HD47 186 aaPredicted RBP11.77□□□□□ -0.53
PTCD1-201ENST00000292478 PADI1Q9ULC6 663 aa11.77□□□□□ -0.53
PTCD1-201ENST00000292478 A8MXE2 369 aa11.77□□□□□ -0.53
PTCD1-201ENST00000292478 H7C1Q1 480 aa11.77□□□□□ -0.53
PTCD1-201ENST00000292478 CD22P20273 847 aa11.77□□□□□ -0.53
PTCD1-201ENST00000292478 APEX1P27695 318 aaKnown RBP11.77□□□□□ -0.53
PTCD1-201ENST00000292478 MRPL19P49406 292 aaKnown RBP11.77□□□□□ -0.53
PTCD1-201ENST00000292478 NKAIN2Q5VXU1 208 aa11.77□□□□□ -0.53
PTCD1-201ENST00000292478 ZNF620Q6ZNG0 422 aa11.77□□□□□ -0.53
PTCD1-201ENST00000292478 NKAIN4Q8IVV8 208 aa11.77□□□□□ -0.53
PTCD1-201ENST00000292478 FAM3DQ96BQ1 224 aa11.77□□□□□ -0.53
PTCD1-201ENST00000292478 MUCL1Q96DR8 90 aa11.77□□□□□ -0.53
PTCD1-201ENST00000292478 NKX3-1Q99801 234 aaPredicted RBP11.77□□□□□ -0.53
PTCD1-201ENST00000292478 DUSP21Q9H596 190 aa11.77□□□□□ -0.53
PTCD1-201ENST00000292478 NGBQ9NPG2 151 aa11.77□□□□□ -0.53
PTCD1-201ENST00000292478 GHRLQ9UBU3 117 aa11.77□□□□□ -0.53
PTCD1-201ENST00000292478 A0A087WUU8 490 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms