RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 PIAS4Q8N2W9 510 aaPredicted RBP7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 ZFP62Q8NB50 900 aaPredicted RBP7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 TMEM239Q8WW34 195 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 DDIT4LQ96D03 193 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 PIGQQ9BRB3 760 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 PLEKHA6Q9Y2H5 1048 aa7.62□□□□□ -1.19
PTPDC1-201ENST00000288976 USP9XQ93008 2570 aaPredicted RBP7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 A0A1B0GVI7 797 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 UBE2QL1A1L167 161 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 C1QTNF9BB2RNN3 333 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 PRRG2O14669 202 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 LCATP04180 440 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 C1QTNF9P0C862 333 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 ZNF26P17031 533 aaPredicted RBP7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 ARHGDIBP52566 201 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 ST3GAL4Q11206 333 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 ZNF169Q14929 603 aaPredicted RBP7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 PGBD2Q6P3X8 592 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 TMEM179BQ7Z7N9 219 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 ADPRHL1Q8NDY3 354 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 SLC7A13Q8TCU3 470 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 COX4I2Q96KJ9 171 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 TUBA8Q9NY65 449 aaPredicted RBP7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 EML6Q6ZMW3 1958 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 GJE1A6NN92 205 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 MT-ATP6P00846 226 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 NHSL2Q5HYW2 709 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 TMPRSS11FQ6ZWK6 438 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 SULF2Q8IWU5 870 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 CCDC120Q96HB5 630 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 ERMAPQ96PL5 475 aaPredicted RBP7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 POTEKPQ9BYX7 375 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 ACKR4Q9NPB9 350 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 IFT46Q9NQC8 304 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 SNTG1Q9NSN8 517 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 DEPPQ9NTK1 212 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 MED11Q9P086 117 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 ABCA12Q86UK0 2595 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 A0A1W2PPK0 400 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 CLPXO76031 633 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 AGFG2O95081 481 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 HK1P19367 917 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 CHMP24386 653 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 MEOX1P50221 254 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 BICRALQ6AI39 1079 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 SPINK14Q6IE38 97 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 C3orf33Q6P1S2 294 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 FIP1L1Q6UN15 594 aaKnown RBP7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 SLC22A16Q86VW1 577 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 RAB26Q9ULW5 256 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 ING4Q9UNL4 249 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 NTNG1Q9Y2I2 539 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 POLQO75417 2590 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 DMXL1Q9Y485 3027 aa7.61□□□□□ -1.19
PTPDC1-201ENST00000288976 FLNBO75369 2602 aaKnown RBP7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 A8MVM7 634 aa7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 B4DXG7 233 aa7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 H0YAE9 185 aa7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 ATXN7O15265 892 aaPredicted RBP7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 TLX2O43763 284 aaPredicted RBP7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 TP53P04637 393 aaPredicted RBP7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 C4BPBP20851 252 aa7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 TACR3P29371 465 aa7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 RPS6KA3P51812 740 aa7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 BDH1Q02338 343 aa7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 TSPAN31Q12999 210 aa7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 IL18R1Q13478 541 aa7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 MFSD13AQ14CX5 517 aa7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 SEC23BQ15437 767 aa7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 GXYLT1Q4G148 440 aa7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 Q6ZS92 163 aa7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 CBR4Q8N4T8 237 aa7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 POC1BQ8TC44 478 aa7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 PGAM5Q96HS1 289 aa7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 TTTY12Q9BZ98 90 aa7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 DEFB127Q9H1M4 99 aa7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 COQ10BQ9H8M1 238 aa7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 MYEF2Q9P2K5 600 aaKnown RBP7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 FBXL2Q9UKC9 423 aa7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 TRAV36DV7A0A075B6V5 113 aa7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 TMED7-TICAM2A0A0A6YYA0 188 aa7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 MED19A0JLT2 244 aaPredicted RBP7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 CLCA1A8K7I4 914 aa7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 TAF4O00268 1085 aa7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 DNPH1O43598 174 aa7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 ZNF3P17036 446 aa7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 PSMA1P25786 263 aaKnown RBP7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 CHRNB4P30926 498 aa7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 FAM109AQ8N4B1 249 aa7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 OR4K5Q8NGD3 323 aa7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 TMEM255BQ8WV15 326 aa7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 TNFAIP8L1Q8WVP5 186 aa7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 RFKQ969G6 155 aa7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 FOXN4Q96NZ1 517 aa7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 BATF3Q9NR55 127 aa7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 SMPD3Q9NY59 655 aaPredicted RBP7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 OSGIN1Q9UJX0 560 aa7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 TMED7Q9Y3B3 224 aa7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 SETD2Q9BYW2 2564 aaPredicted RBP7.6□□□□□ -1.19
PTPDC1-201ENST00000288976 IGKV1D-42A0A075B6H8 117 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms