RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 ALKBH6Q3KRA9 238 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 TMEM52BQ4KMG9 183 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 PHLDA2Q53GA4 152 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 TMEM240Q5SV17 173 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 TRILQ7L0X0 811 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 TMPRSS7Q7RTY8 843 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 ZNF546Q86UE3 836 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 NOXA1Q86UR1 476 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 SLC16A11Q8NCK7 471 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 HAVCR2Q8TDQ0 301 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 WBP2Q969T9 261 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 UBE2ZQ9H832 354 aaPredicted RBP10.95□□□□□ -0.66
SHPRH-201ENST00000275233 LIN7BQ9HAP6 207 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 CNOT2Q9NZN8 540 aaKnown RBP10.95□□□□□ -0.66
SHPRH-201ENST00000275233 COA3Q9Y2R0 106 aaPredicted RBP10.95□□□□□ -0.66
SHPRH-201ENST00000275233 SNCAP37840 140 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 GPR176Q14439 515 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 ATPAF1Q5TC12 328 aaPredicted RBP10.95□□□□□ -0.66
SHPRH-201ENST00000275233 KCTD11Q693B1 232 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 IDO2Q6ZQW0 420 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 RNF113BQ8IZP6 322 aaKnown RBP10.95□□□□□ -0.66
SHPRH-201ENST00000275233 CCL4L1Q8NHW4 92 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 LIPHQ8WWY8 451 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 TMEM106AQ96A25 262 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 ANKRD9Q96BM1 317 aaPredicted RBP10.95□□□□□ -0.66
SHPRH-201ENST00000275233 BSCL2Q96G97 398 aaPredicted RBP10.95□□□□□ -0.66
SHPRH-201ENST00000275233 NIPSNAP1Q9BPW8 284 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.95□□□□□ -0.661e-6■■■■□ 20
SHPRH-201ENST00000275233 MEIOCA2RUB1 952 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 PRRT4C9JH25 899 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 MEP1BQ16820 701 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 BCL7AQ4VC05 210 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 TRMT12Q53H54 448 aaKnown RBP10.95□□□□□ -0.66
SHPRH-201ENST00000275233 SLC48A1Q6P1K1 146 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 FJX1Q86VR8 437 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 MYOTQ9UBF9 498 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.95□□□□□ -0.66
SHPRH-201ENST00000275233 ARHGAP33O14559 1287 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 WNT11O96014 354 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 NPPBP16860 134 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 NPBWR1P48145 328 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 MC2RQ01718 297 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 HABP2Q14520 560 aaPredicted RBP10.95□□□□□ -0.66
SHPRH-201ENST00000275233 ZNF77Q15935 545 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 GGTA1PQ4G0N0 100 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 LAX1Q8IWV1 398 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 OPA3Q9H6K4 179 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 C19orf12Q9NSK7 152 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 FBXL2Q9UKC9 423 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 NXT1Q9UKK6 140 aaKnown RBP10.95□□□□□ -0.66
SHPRH-201ENST00000275233 NTNG1Q9Y2I2 539 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 FUOMA2VDF0 154 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 RNF212BA8MTL3 300 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 H0Y8G0 127 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 ABLIM3O94929 683 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 CNIH1O95406 144 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 SLC35E2P0CK97 266 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 ELAVL4P26378 380 aaKnown RBP10.95□□□□□ -0.66
SHPRH-201ENST00000275233 EBPQ15125 230 aaKnown RBP10.95□□□□□ -0.66
SHPRH-201ENST00000275233 AARDQ4LEZ3 155 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 RTL6Q6ICC9 239 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 OGFOD3Q6PK18 319 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 GDPGP1Q6ZNW5 385 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 RDH10Q8IZV5 341 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 ADAMTS14Q8WXS8 1223 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 UPRTQ96BW1 309 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 SLC19A3Q9BZV2 496 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 AMBRA1Q9C0C7 1298 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 PPA2Q9H2U2 334 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 SEMA4GQ9NTN9 838 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 ATP23Q9Y6H3 246 aa10.95□□□□□ -0.66
SHPRH-201ENST00000275233 I6L893 689 aaPredicted RBP10.94□□□□□ -0.66
SHPRH-201ENST00000275233 RBM45Q8IUH3 476 aaKnown RBP10.94□□□□□ -0.66
SHPRH-201ENST00000275233 PCNPQ8WW12 178 aaKnown RBP10.94□□□□□ -0.66
SHPRH-201ENST00000275233 C3orf49Q96BT1 292 aa10.94□□□□□ -0.66
SHPRH-201ENST00000275233 ZNF419Q96HQ0 510 aaPredicted RBP10.94□□□□□ -0.66
SHPRH-201ENST00000275233 NRXN3Q9Y4C0 1643 aa10.94□□□□□ -0.66
SHPRH-201ENST00000275233 ZNF891A8MT65 544 aaPredicted RBP10.94□□□□□ -0.66
SHPRH-201ENST00000275233 PHF1O43189 567 aaPredicted RBP10.94□□□□□ -0.66
SHPRH-201ENST00000275233 NSA2O95478 260 aaKnown RBP10.94□□□□□ -0.66
SHPRH-201ENST00000275233 RAD52P43351 418 aa10.94□□□□□ -0.66
SHPRH-201ENST00000275233 CATR1Q13166 79 aa10.94□□□□□ -0.66
SHPRH-201ENST00000275233 ADPRMQ3LIE5 342 aa10.94□□□□□ -0.66
SHPRH-201ENST00000275233 HS3ST3A1Q9Y663 406 aa10.94□□□□□ -0.66
SHPRH-201ENST00000275233 DDX60Q8IY21 1712 aaKnown RBP10.94□□□□□ -0.66
SHPRH-201ENST00000275233 CTNSO60931 367 aa10.94□□□□□ -0.66
SHPRH-201ENST00000275233 CSO75390 466 aaKnown RBP10.94□□□□□ -0.66
SHPRH-201ENST00000275233 CAMK2BQ13554 666 aa10.94□□□□□ -0.66
SHPRH-201ENST00000275233 OTPQ5XKR4 325 aa10.94□□□□□ -0.66
SHPRH-201ENST00000275233 ABHD17CQ6PCB6 329 aa10.94□□□□□ -0.66
SHPRH-201ENST00000275233 CPEB2Q7Z5Q1 589 aaKnown RBP10.94□□□□□ -0.66
SHPRH-201ENST00000275233 OR56B1Q8NGI3 324 aa10.94□□□□□ -0.66
SHPRH-201ENST00000275233 OR6T1Q8NGN1 323 aa10.94□□□□□ -0.66
SHPRH-201ENST00000275233 CPNE4Q96A23 557 aaPredicted RBP10.94□□□□□ -0.66
SHPRH-201ENST00000275233 ELP4Q96EB1 424 aa10.94□□□□□ -0.66
SHPRH-201ENST00000275233 BANF2Q9H503 90 aa10.94□□□□□ -0.66
SHPRH-201ENST00000275233 GPR173Q9NS66 373 aa10.94□□□□□ -0.66
SHPRH-201ENST00000275233 PUS1Q9Y606 427 aaKnown RBP eCLIP10.94□□□□□ -0.66
SHPRH-201ENST00000275233 A0A096LPE4 126 aa10.94□□□□□ -0.66
SHPRH-201ENST00000275233 A0A1W2PPZ6 126 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms