RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 OR4C3Q8NH37 302 aa25.04■■□□□ 1.6
CBX4-201ENST00000269397 TNFAIP8L1Q8WVP5 186 aa25.04■■□□□ 1.6
CBX4-201ENST00000269397 F5P12259 2224 aa25.04■■□□□ 1.6
CBX4-201ENST00000269397 SMAD9O15198 467 aaKnown RBP25.04■■□□□ 1.6
CBX4-201ENST00000269397 KDM4BO94953 1096 aa25.04■■□□□ 1.6
CBX4-201ENST00000269397 F13BP05160 661 aa25.04■■□□□ 1.6
CBX4-201ENST00000269397 GK2Q14410 553 aaPredicted RBP25.04■■□□□ 1.6
CBX4-201ENST00000269397 ZNF273Q14593 569 aa25.04■■□□□ 1.6
CBX4-201ENST00000269397 KIR2DS3Q14952 304 aa25.04■■□□□ 1.6
CBX4-201ENST00000269397 OVCH2Q7RTZ1 564 aa25.04■■□□□ 1.6
CBX4-201ENST00000269397 RCBTB1Q8NDN9 531 aa25.04■■□□□ 1.6
CBX4-201ENST00000269397 OR52H1Q8NGJ2 320 aa25.04■■□□□ 1.6
CBX4-201ENST00000269397 OR1S1Q8NH92 325 aa25.04■■□□□ 1.6
CBX4-201ENST00000269397 LRFN5Q96NI6 719 aa25.04■■□□□ 1.6
CBX4-201ENST00000269397 EXOSC3Q9NQT5 275 aaKnown RBP25.04■■□□□ 1.6
CBX4-201ENST00000269397 GPANK1O95872 356 aa25.03■■□□□ 1.6
CBX4-201ENST00000269397 MAT1AQ00266 395 aaKnown RBP25.03■■□□□ 1.6
CBX4-201ENST00000269397 SORDQ00796 357 aa25.03■■□□□ 1.6
CBX4-201ENST00000269397 SLC35D3Q5M8T2 416 aa25.03■■□□□ 1.6
CBX4-201ENST00000269397 ATRAIDQ6UW56 229 aa25.03■■□□□ 1.6
CBX4-201ENST00000269397 ZNF454Q8N9F8 522 aa25.03■■□□□ 1.6
CBX4-201ENST00000269397 BVESQ8NE79 360 aa25.03■■□□□ 1.6
CBX4-201ENST00000269397 TMEM106AQ96A25 262 aa25.03■■□□□ 1.6
CBX4-201ENST00000269397 ZNF578Q96N58 590 aaPredicted RBP25.03■■□□□ 1.6
CBX4-201ENST00000269397 SZT2Q5T011 3432 aa25.03■■□□□ 1.6
CBX4-201ENST00000269397 A0A087WUJ7 227 aa25.03■■□□□ 1.6
CBX4-201ENST00000269397 TMEM272A0A1B0GTI8 110 aa25.03■■□□□ 1.6
CBX4-201ENST00000269397 KRBOX1C9JBD0 128 aa25.03■■□□□ 1.6
CBX4-201ENST00000269397 CSTAP01040 98 aa25.03■■□□□ 1.6
CBX4-201ENST00000269397 GPR143P51810 404 aa25.03■■□□□ 1.6
CBX4-201ENST00000269397 GAL3ST1Q99999 423 aa25.03■■□□□ 1.6
CBX4-201ENST00000269397 ST6GALNAC1Q9NSC7 600 aaPredicted RBP25.03■■□□□ 1.6
CBX4-201ENST00000269397 MED11Q9P086 117 aa25.03■■□□□ 1.6
CBX4-201ENST00000269397 ZNF337Q9Y3M9 751 aa25.03■■□□□ 1.6
CBX4-201ENST00000269397 H7C417 338 aa25.02■■□□□ 1.6
CBX4-201ENST00000269397 TOR1AO14656 332 aa25.02■■□□□ 1.6
CBX4-201ENST00000269397 GTF2F2P13984 249 aa25.02■■□□□ 1.6
CBX4-201ENST00000269397 MECP2P51608 486 aaKnown RBP25.02■■□□□ 1.6
CBX4-201ENST00000269397 DEFB110Q30KQ9 67 aa25.02■■□□□ 1.6
CBX4-201ENST00000269397 ZNF660Q6AZW8 331 aaPredicted RBP25.02■■□□□ 1.6
CBX4-201ENST00000269397 JAZF1Q86VZ6 243 aa25.02■■□□□ 1.6
CBX4-201ENST00000269397 NSMAFQ92636 917 aa25.02■■□□□ 1.6
CBX4-201ENST00000269397 POLE3Q9NRF9 147 aa25.02■■□□□ 1.6
CBX4-201ENST00000269397 MTFP1Q9UDX5 166 aa25.02■■□□□ 1.6
CBX4-201ENST00000269397 ARPC3O15145 178 aa25.02■■□□□ 1.6
CBX4-201ENST00000269397 RAD1O60671 282 aa25.02■■□□□ 1.6
CBX4-201ENST00000269397 RLN2P04090 185 aa25.02■■□□□ 1.6
CBX4-201ENST00000269397 ZNHIT3Q15649 155 aaPredicted RBP25.02■■□□□ 1.6
CBX4-201ENST00000269397 ZNF550Q7Z398 422 aa25.02■■□□□ 1.6
CBX4-201ENST00000269397 SLC43A2Q8N370 569 aa25.02■■□□□ 1.6
CBX4-201ENST00000269397 ESX1Q8N693 406 aa25.02■■□□□ 1.6
CBX4-201ENST00000269397 TNFSF14O43557 240 aa25.01■■□□□ 1.59
CBX4-201ENST00000269397 FGF2P09038 288 aa25.01■■□□□ 1.59
CBX4-201ENST00000269397 S1PR1P21453 382 aa25.01■■□□□ 1.59
CBX4-201ENST00000269397 PPP1CAP62136 330 aa25.01■■□□□ 1.59
CBX4-201ENST00000269397 C4orf46Q504U0 113 aa25.01■■□□□ 1.59
CBX4-201ENST00000269397 NPSR1Q6W5P4 371 aa25.01■■□□□ 1.59
CBX4-201ENST00000269397 BIVMQ86UB2 503 aa25.01■■□□□ 1.59
CBX4-201ENST00000269397 CCDC74AQ96AQ1 378 aa25.01■■□□□ 1.59
CBX4-201ENST00000269397 DPYSL5Q9BPU6 564 aa25.01■■□□□ 1.59
CBX4-201ENST00000269397 TRAV18A0A075B6X5 111 aa25.01■■□□□ 1.59
CBX4-201ENST00000269397 HMSDA8MTL9 139 aa25.01■■□□□ 1.59
CBX4-201ENST00000269397 XRCC3O43542 346 aa25.01■■□□□ 1.59
CBX4-201ENST00000269397 B3GNTL1Q67FW5 361 aaPredicted RBP25.01■■□□□ 1.59
CBX4-201ENST00000269397 TFAP2EQ6VUC0 442 aa25.01■■□□□ 1.59
CBX4-201ENST00000269397 ZNF676Q8N7Q3 588 aa25.01■■□□□ 1.59
CBX4-201ENST00000269397 OR9A4Q8NGU2 314 aa25.01■■□□□ 1.59
CBX4-201ENST00000269397 MOGAT1Q96PD6 335 aa25.01■■□□□ 1.59
CBX4-201ENST00000269397 ETV7Q9Y603 341 aa25.01■■□□□ 1.59
CBX4-201ENST00000269397 EGFP01133 1207 aa25■■□□□ 1.59
CBX4-201ENST00000269397 APOC3P02656 99 aa25■■□□□ 1.59
CBX4-201ENST00000269397 TACSTD2P09758 323 aa25■■□□□ 1.59
CBX4-201ENST00000269397 HTRA3P83110 453 aa25■■□□□ 1.59
CBX4-201ENST00000269397 C1orf53Q5VUE5 145 aa25■■□□□ 1.59
CBX4-201ENST00000269397 ZNF776Q68DI1 518 aaPredicted RBP25■■□□□ 1.59
CBX4-201ENST00000269397 ZNF761Q86XN6 746 aaPredicted RBP25■■□□□ 1.59
CBX4-201ENST00000269397 LSM14AQ8ND56 463 aaKnown RBP25■■□□□ 1.59
CBX4-201ENST00000269397 PAWRQ96IZ0 340 aaKnown RBP25■■□□□ 1.59
CBX4-201ENST00000269397 PLA2G2FQ9BZM2 168 aa25■■□□□ 1.59
CBX4-201ENST00000269397 MED9Q9NWA0 146 aa25■■□□□ 1.59
CBX4-201ENST00000269397 CD3DP04234 171 aa25■■□□□ 1.59
CBX4-201ENST00000269397 FAUP35544 74 aaKnown RBP25■■□□□ 1.59
CBX4-201ENST00000269397 ARHGDIBP52566 201 aa25■■□□□ 1.59
CBX4-201ENST00000269397 PRMT2P55345 433 aa25■■□□□ 1.59
CBX4-201ENST00000269397 TSSK4Q6SA08 328 aa25■■□□□ 1.59
CBX4-201ENST00000269397 PDZD9Q8IXQ8 264 aa25■■□□□ 1.59
CBX4-201ENST00000269397 CSNK1A1LQ8N752 337 aa25■■□□□ 1.59
CBX4-201ENST00000269397 DUSP19Q8WTR2 217 aa25■■□□□ 1.59
CBX4-201ENST00000269397 C3orf49Q96BT1 292 aa25■■□□□ 1.59
CBX4-201ENST00000269397 MFFQ9GZY8 342 aa25■■□□□ 1.59
CBX4-201ENST00000269397 LDOC1O95751 146 aaPredicted RBP24.99■■□□□ 1.59
CBX4-201ENST00000269397 ERV3-1Q14264 604 aa24.99■■□□□ 1.59
CBX4-201ENST00000269397 SLC6A19Q695T7 634 aa24.99■■□□□ 1.59
CBX4-201ENST00000269397 SLC16A9Q7RTY1 509 aa24.99■■□□□ 1.59
CBX4-201ENST00000269397 OR6N2Q8NGY6 317 aa24.99■■□□□ 1.59
CBX4-201ENST00000269397 PMM1Q92871 262 aa24.99■■□□□ 1.59
CBX4-201ENST00000269397 SCARF2Q96GP6 870 aaPredicted RBP24.99■■□□□ 1.59
CBX4-201ENST00000269397 WDR76Q9H967 626 aa24.99■■□□□ 1.59
CBX4-201ENST00000269397 TRANK1O15050 2925 aa24.99■■□□□ 1.59
CBX4-201ENST00000269397 GGT3PA6NGU5 568 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms