RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 CEP250Q9BV73 2442 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 PRAMEF27A3QJZ7 478 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 GABRPO00591 440 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 DOK2O60496 412 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 TSC22D2O75157 780 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 VAMP5O95183 116 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 UCHL1P09936 223 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 FOXK1P85037 733 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 FXNQ16595 210 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 ARSKQ6UWY0 536 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 CENPOQ9BU64 300 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 FLRT3Q9NZU0 649 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 PCDHGB6Q9Y5F9 930 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 THADAQ6YHU6 1953 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 CDC42EP2O14613 210 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 SLC19A2O60779 497 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 MTRF1O75570 445 aaKnown RBP13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 IGKV1D-16P01601 117 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 TPOP07202 933 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 FTH1P19P0C7X4 201 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 POU3F4P49335 361 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 DSCR4P56555 118 aaPredicted RBP13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 RAB25P57735 213 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 WIPI1Q5MNZ9 446 aaPredicted RBP13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 BEST3Q8N1M1 668 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 ZNF615Q8N8J6 731 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 HOXB13Q92826 284 aaPredicted RBP13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 ZBTB8AQ96BR9 441 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 TMEM43Q9BTV4 400 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 OR51B6Q9H340 312 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 EIF3KQ9UBQ5 218 aaKnown RBP13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 ZNF222Q9UK12 451 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 FITM1A5D6W6 292 aa13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 GGT3PA6NGU5 568 aa13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 TNFRSF10AO00220 468 aa13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 SEC14L2O76054 403 aa13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 ERCC1P07992 297 aaPredicted RBP13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 TMEM244Q5VVB8 128 aa13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 DND1Q8IYX4 353 aaKnown RBP13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 NANOGP1Q8N7R0 232 aa13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 FLVCR1-AS1Q8TAF5 88 aa13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 KCNE4Q8WWG9 221 aa13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 VOPP1Q96AW1 172 aa13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 ATG5Q9H1Y0 275 aa13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 SLC22A11Q9NSA0 550 aa13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 CCDC88CQ9P219 2028 aa13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 ING4Q9UNL4 249 aa13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 LTBP2Q14767 1821 aa13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 A0A087WZY1 265 aa13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 VSTM5A8MXK1 200 aa13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 FTCDNL1E5RQL4 147 aa13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 WBP4O75554 376 aaKnown RBP13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 OR3A3P47888 321 aa13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 OR3A2P47893 321 aa13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 TPTEP56180 551 aa13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 RADILQ96JH8 1075 aa13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 ING3Q9NXR8 418 aa13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 VSX1Q9NZR4 365 aaPredicted RBP13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 ACOD1A6NK06 481 aa13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 H0YC42 278 aa13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 PIPP12273 146 aaPredicted RBP13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 GABRA5P31644 462 aa13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 FUT5Q11128 374 aa13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 COL19A1Q14993 1142 aa13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 ZNF574Q6ZN55 896 aaPredicted RBP13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 M1APQ8TC57 530 aa13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 ZC3H10Q96K80 434 aaKnown RBP13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 TXNIPQ9H3M7 391 aa13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 CDH20Q9HBT6 801 aa13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 MYEF2Q9P2K5 600 aaKnown RBP13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 TNFSF11O14788 317 aa13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 MAGEB4O15481 346 aaPredicted RBP13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 JUNBP17275 347 aaPredicted RBP13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 STARP49675 285 aa13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 DIO1P49895 249 aa13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 CAV3P56539 151 aa13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 EMC4Q5J8M3 183 aa13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 BTN2A1Q7KYR7 527 aa13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 C15orf40Q8WUR7 153 aa13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 ZNF281Q9Y2X9 895 aa13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 KLK4Q9Y5K2 254 aa13.12□□□□□ -0.31
PDLIM2-201ENST00000265810 MSL3P1P0C860 447 aa13.11□□□□□ -0.31
PDLIM2-201ENST00000265810 OPRL1P41146 370 aa13.11□□□□□ -0.31
PDLIM2-201ENST00000265810 CLDN15P56746 228 aa13.11□□□□□ -0.31
PDLIM2-201ENST00000265810 SELENOVP59797 346 aa13.11□□□□□ -0.31
PDLIM2-201ENST00000265810 TMEM69Q5SWH9 247 aa13.11□□□□□ -0.31
PDLIM2-201ENST00000265810 LIN54Q6MZP7 749 aa13.11□□□□□ -0.31
PDLIM2-201ENST00000265810 SLC16A9Q7RTY1 509 aa13.11□□□□□ -0.31
PDLIM2-201ENST00000265810 GALNT16Q8N428 558 aa13.11□□□□□ -0.31
PDLIM2-201ENST00000265810 OR52N1Q8NH53 320 aa13.11□□□□□ -0.31
PDLIM2-201ENST00000265810 ACOT12Q8WYK0 555 aa13.11□□□□□ -0.31
PDLIM2-201ENST00000265810 C12orf49Q9H741 205 aa13.11□□□□□ -0.31
PDLIM2-201ENST00000265810 PRMT8Q9NR22 394 aaPredicted RBP13.11□□□□□ -0.31
PDLIM2-201ENST00000265810 HDGFL3Q9Y3E1 203 aa13.11□□□□□ -0.31
PDLIM2-201ENST00000265810 C21orf140B9A014 251 aa13.11□□□□□ -0.31
PDLIM2-201ENST00000265810 MYBPHQ13203 477 aa13.11□□□□□ -0.31
PDLIM2-201ENST00000265810 FAM189A2Q15884 450 aa13.11□□□□□ -0.31
PDLIM2-201ENST00000265810 DCXRQ7Z4W1 244 aa13.11□□□□□ -0.31
PDLIM2-201ENST00000265810 FTMTQ8N4E7 242 aa13.11□□□□□ -0.31
PDLIM2-201ENST00000265810 SLC22A4Q9H015 551 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms