RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 ZNF574Q6ZN55 896 aaPredicted RBP8.02□□□□□ -1.12
VAPB-201ENST00000265619 CXXC5Q7LFL8 322 aaKnown RBP8.02□□□□□ -1.12
VAPB-201ENST00000265619 BIVMQ86UB2 503 aa8.02□□□□□ -1.12
VAPB-201ENST00000265619 LILRA3Q8N6C8 439 aaPredicted RBP8.02□□□□□ -1.12
VAPB-201ENST00000265619 STEAP2Q8NFT2 490 aa8.02□□□□□ -1.12
VAPB-201ENST00000265619 OR5AP2Q8NGF4 316 aa8.02□□□□□ -1.12
VAPB-201ENST00000265619 OR10D4PQ8NGN7 298 aa8.02□□□□□ -1.12
VAPB-201ENST00000265619 C1orf216Q8TAB5 229 aa8.02□□□□□ -1.12
VAPB-201ENST00000265619 WFIKKN2Q8TEU8 576 aa8.02□□□□□ -1.12
VAPB-201ENST00000265619 C16orf78Q8WTQ4 265 aa8.02□□□□□ -1.12
VAPB-201ENST00000265619 BBS4Q96RK4 519 aa8.02□□□□□ -1.12
VAPB-201ENST00000265619 WNT5BQ9H1J7 359 aa8.02□□□□□ -1.12
VAPB-201ENST00000265619 RIMS4Q9H426 269 aaPredicted RBP8.02□□□□□ -1.12
VAPB-201ENST00000265619 RHOFQ9HBH0 211 aa8.02□□□□□ -1.12
VAPB-201ENST00000265619 TRIM36Q9NQ86 728 aa8.02□□□□□ -1.12
VAPB-201ENST00000265619 ABRACLQ9P1F3 81 aa8.02□□□□□ -1.12
VAPB-201ENST00000265619 NPFFR2Q9Y5X5 522 aa8.02□□□□□ -1.12
VAPB-201ENST00000265619 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.02□□□□□ -1.13
VAPB-201ENST00000265619 IRGMA1A4Y4 181 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 TMEM202A6NGA9 273 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 SCGB1D2O95969 90 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 GKN3PP0CG01 181 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 CTHP32929 405 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 OMPP47874 163 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 HSPB3Q12988 150 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 ODF4Q2M2E3 257 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 LIPNQ5VXI9 398 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 FAM111BQ6SJ93 734 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 GDPD4Q6W3E5 623 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 SPNS3Q6ZMD2 512 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 ZNF836Q6ZNA1 936 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 ABHD13Q7L211 337 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 THOC6Q86W42 341 aaKnown RBP8.02□□□□□ -1.13
VAPB-201ENST00000265619 BHLHE23Q8NDY6 225 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 OR9A2Q8NGT5 310 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 ASB11Q8WXH4 323 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 OCSTAMPQ9BR26 566 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 NUDT16L1Q9BRJ7 211 aaKnown RBP8.02□□□□□ -1.13
VAPB-201ENST00000265619 SEC61A2Q9H9S3 476 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 CACFD1Q9UGQ2 172 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 ARID1BQ8NFD5 2236 aaPredicted RBP8.02□□□□□ -1.13
VAPB-201ENST00000265619 A0A0B4J2A0 478 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 A0A0D9SG52 128 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 A0A1W2PPE2 198 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 OR2AT4A6NND4 320 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 FAM157AC9JC47 383 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 PSMD9O00233 223 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 KDELR3O43731 214 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 TYRP1P17643 537 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 NT5EP21589 574 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 FXYD6P3P58550 94 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 ST8SIA6P61647 398 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 CXADRP78310 365 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 KCNAB1Q14722 419 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 NR0B2Q15466 257 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 TRAM1Q15629 374 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 PGGHGQ32M88 737 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 TMEM69Q5SWH9 247 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 DMKNQ6E0U4 476 aaPredicted RBP8.02□□□□□ -1.13
VAPB-201ENST00000265619 C11orf87Q6NUJ2 197 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 CDC73Q6P1J9 531 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 BAIAP2L2Q6UXY1 529 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 TMED4Q7Z7H5 227 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 OR1J4Q8NGS1 313 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 PPP1R1CQ8WVI7 109 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 SECTM1Q8WVN6 248 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 ARL11Q969Q4 196 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 SLC12A9Q9BXP2 914 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 OR5V1Q9UGF6 321 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 SHPKQ9UHJ6 478 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 ST6GALNAC2Q9UJ37 374 aa8.02□□□□□ -1.13
VAPB-201ENST00000265619 NAP1L6A6NFF2 107 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 H3BNC9 293 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 BRINP1O60477 761 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 MED6O75586 246 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 CD74P04233 296 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 SFTPBP07988 381 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 HIST1H1BP16401 226 aaKnown RBP8.01□□□□□ -1.13
VAPB-201ENST00000265619 CD80P33681 288 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 PSMB10P40306 273 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 ZNF763Q0D2J5 394 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 INPP5JQ15735 1006 aaPredicted RBP8.01□□□□□ -1.13
VAPB-201ENST00000265619 DUSP5Q16690 384 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 OR10K2Q6IF99 312 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 RPL13AP3Q6NVV1 102 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 NIPAL3Q6P499 406 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 FRRS1Q6ZNA5 592 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 TTLL10Q6ZVT0 673 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 SFTPA1Q8IWL2 248 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 PRR18Q8N4B5 295 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 ZNF740Q8NDX6 193 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 OR1J2Q8NGS2 313 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 OSTF1Q92882 214 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 RFKQ969G6 155 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 RAB3CQ96E17 227 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 OR51V1Q9H2C8 321 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 OPA3Q9H6K4 179 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 CRLS1Q9UJA2 301 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 YBX2Q9Y2T7 364 aaKnown RBP8.01□□□□□ -1.13
VAPB-201ENST00000265619 MMACHCQ9Y4U1 282 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms