RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 A0A1B0GVG6 124 aa16.23■□□□□ 0.19
SDF4-201ENST00000263741 A8MXE2 369 aa16.23■□□□□ 0.19
SDF4-201ENST00000263741 GPR171O14626 319 aa16.23■□□□□ 0.19
SDF4-201ENST00000263741 RNF13O43567 381 aa16.23■□□□□ 0.19
SDF4-201ENST00000263741 UQCRC1P31930 480 aa16.23■□□□□ 0.19
SDF4-201ENST00000263741 FHL1Q13642 323 aa16.23■□□□□ 0.19
SDF4-201ENST00000263741 HIST2H2BCQ6DN03 193 aa16.23■□□□□ 0.19
SDF4-201ENST00000263741 UEVLDQ8IX04 471 aa16.23■□□□□ 0.19
SDF4-201ENST00000263741 HS3ST5Q8IZT8 346 aa16.23■□□□□ 0.19
SDF4-201ENST00000263741 ZNF786Q8N393 782 aa16.23■□□□□ 0.19
SDF4-201ENST00000263741 TXNDC15Q96J42 360 aa16.23■□□□□ 0.19
SDF4-201ENST00000263741 RBM24Q9BX46 236 aaKnown RBP16.23■□□□□ 0.19
SDF4-201ENST00000263741 H3BSA7 217 aa16.23■□□□□ 0.19
SDF4-201ENST00000263741 MSTNO14793 375 aa16.23■□□□□ 0.19
SDF4-201ENST00000263741 MRPL33O75394 65 aaKnown RBP16.23■□□□□ 0.19
SDF4-201ENST00000263741 VAMP5O95183 116 aa16.23■□□□□ 0.19
SDF4-201ENST00000263741 IGF2P01344 180 aa16.23■□□□□ 0.19
SDF4-201ENST00000263741 CD8BP10966 210 aa16.23■□□□□ 0.19
SDF4-201ENST00000263741 MELKQ14680 651 aa16.23■□□□□ 0.19
SDF4-201ENST00000263741 POU4F3Q15319 338 aa16.23■□□□□ 0.19
SDF4-201ENST00000263741 NIPAL3Q6P499 406 aa16.23■□□□□ 0.19
SDF4-201ENST00000263741 AAED1Q7RTV5 226 aa16.23■□□□□ 0.19
SDF4-201ENST00000263741 ZER1Q7Z7L7 766 aa16.23■□□□□ 0.19
SDF4-201ENST00000263741 OAFQ86UD1 273 aa16.23■□□□□ 0.19
SDF4-201ENST00000263741 ZNF100Q8IYN0 542 aa16.23■□□□□ 0.19
SDF4-201ENST00000263741 PSMG3-AS1Q96PY0 264 aa16.23■□□□□ 0.19
SDF4-201ENST00000263741 PLSCR4Q9NRQ2 329 aa16.23■□□□□ 0.19
SDF4-201ENST00000263741 IL20RAQ9UHF4 553 aa16.23■□□□□ 0.19
SDF4-201ENST00000263741 ZNF701M0R085 212 aaPredicted RBP16.22■□□□□ 0.19
SDF4-201ENST00000263741 GNGT2O14610 69 aa16.22■□□□□ 0.19
SDF4-201ENST00000263741 POU2F1P14859 743 aa16.22■□□□□ 0.19
SDF4-201ENST00000263741 TTKP33981 857 aa16.22■□□□□ 0.19
SDF4-201ENST00000263741 OR3A2P47893 321 aa16.22■□□□□ 0.19
SDF4-201ENST00000263741 DCTN2Q13561 401 aaKnown RBP16.22■□□□□ 0.19
SDF4-201ENST00000263741 PGBD2Q6P3X8 592 aa16.22■□□□□ 0.19
SDF4-201ENST00000263741 TMPRSS11FQ6ZWK6 438 aa16.22■□□□□ 0.19
SDF4-201ENST00000263741 CDK20Q8IZL9 346 aa16.22■□□□□ 0.19
SDF4-201ENST00000263741 FAM81AQ8TBF8 368 aa16.22■□□□□ 0.19
SDF4-201ENST00000263741 LIPHQ8WWY8 451 aa16.22■□□□□ 0.19
SDF4-201ENST00000263741 APH1AQ96BI3 265 aa16.22■□□□□ 0.19
SDF4-201ENST00000263741 TNFRSF13CQ96RJ3 184 aa16.22■□□□□ 0.19
SDF4-201ENST00000263741 TMEM5Q9Y2B1 443 aa16.22■□□□□ 0.19
SDF4-201ENST00000263741 CENPEQ02224 2701 aa16.22■□□□□ 0.19
SDF4-201ENST00000263741 IFNGR1P15260 489 aa16.22■□□□□ 0.19
SDF4-201ENST00000263741 HMGA2P52926 109 aa16.22■□□□□ 0.19
SDF4-201ENST00000263741 RPS4XP62701 263 aaKnown RBP16.22■□□□□ 0.19
SDF4-201ENST00000263741 FAM27E3Q08E93 113 aa16.22■□□□□ 0.19
SDF4-201ENST00000263741 TSC22D1Q15714 1073 aa16.22■□□□□ 0.19
SDF4-201ENST00000263741 CARD17Q5XLA6 110 aa16.22■□□□□ 0.19
SDF4-201ENST00000263741 CYGBQ8WWM9 190 aa16.22■□□□□ 0.19
SDF4-201ENST00000263741 MCCC2Q9HCC0 563 aa16.22■□□□□ 0.19
SDF4-201ENST00000263741 SMPD3Q9NY59 655 aaPredicted RBP16.22■□□□□ 0.19
SDF4-201ENST00000263741 OAZ3Q9UMX2 235 aa16.22■□□□□ 0.19
SDF4-201ENST00000263741 HIF3AQ9Y2N7 669 aa16.22■□□□□ 0.19
SDF4-201ENST00000263741 TRIM64CA6NLI5 447 aa16.21■□□□□ 0.19
SDF4-201ENST00000263741 KLF4O43474 513 aa16.21■□□□□ 0.19
SDF4-201ENST00000263741 E2F6O75461 281 aa16.21■□□□□ 0.19
SDF4-201ENST00000263741 CCNB2O95067 398 aa16.21■□□□□ 0.19
SDF4-201ENST00000263741 CCKARP32238 428 aa16.21■□□□□ 0.19
SDF4-201ENST00000263741 CAPGP40121 348 aa16.21■□□□□ 0.19
SDF4-201ENST00000263741 FOXG1P55316 489 aaPredicted RBP16.21■□□□□ 0.19
SDF4-201ENST00000263741 TOP3AQ13472 1001 aaPredicted RBP16.21■□□□□ 0.19
SDF4-201ENST00000263741 SLC36A3Q495N2 470 aa16.21■□□□□ 0.19
SDF4-201ENST00000263741 TSPO2Q5TGU0 170 aa16.21■□□□□ 0.19
SDF4-201ENST00000263741 UBE2J2Q8N2K1 259 aa16.21■□□□□ 0.19
SDF4-201ENST00000263741 DHRSXQ8N5I4 330 aa16.21■□□□□ 0.19
SDF4-201ENST00000263741 AQP11Q8NBQ7 271 aa16.21■□□□□ 0.19
SDF4-201ENST00000263741 TMEM45BQ96B21 275 aa16.21■□□□□ 0.19
SDF4-201ENST00000263741 ALKBH3Q96Q83 286 aaPredicted RBP16.21■□□□□ 0.19
SDF4-201ENST00000263741 YTHDF1Q9BYJ9 559 aaKnown RBP16.21■□□□□ 0.19
SDF4-201ENST00000263741 MAGED1Q9Y5V3 778 aaPredicted RBP16.21■□□□□ 0.19
SDF4-201ENST00000263741 CLOCKO15516 846 aa16.2■□□□□ 0.18
SDF4-201ENST00000263741 ZBED5Q49AG3 693 aa16.2■□□□□ 0.18
SDF4-201ENST00000263741 C9orf135Q5VTT2 229 aa16.2■□□□□ 0.18
SDF4-201ENST00000263741 ANKRD34AQ69YU3 496 aa16.2■□□□□ 0.18
SDF4-201ENST00000263741 ZNF770Q6IQ21 691 aaPredicted RBP16.2■□□□□ 0.18
SDF4-201ENST00000263741 NHLRC1Q6VVB1 395 aa16.2■□□□□ 0.18
SDF4-201ENST00000263741 PXKQ7Z7A4 578 aa16.2■□□□□ 0.18
SDF4-201ENST00000263741 STK32CQ86UX6 486 aa16.2■□□□□ 0.18
SDF4-201ENST00000263741 BDH2Q9BUT1 245 aa16.2■□□□□ 0.18
SDF4-201ENST00000263741 ENKD1Q9H0I2 346 aa16.2■□□□□ 0.18
SDF4-201ENST00000263741 NTN4Q9HB63 628 aa16.2■□□□□ 0.18
SDF4-201ENST00000263741 SLC7A10Q9NS82 523 aa16.2■□□□□ 0.18
SDF4-201ENST00000263741 DNAJB9Q9UBS3 223 aa16.2■□□□□ 0.18
SDF4-201ENST00000263741 NOX1Q9Y5S8 564 aa16.2■□□□□ 0.18
SDF4-201ENST00000263741 MCIDASD6RGH6 385 aa16.2■□□□□ 0.18
SDF4-201ENST00000263741 SLC9A3P48764 834 aa16.2■□□□□ 0.18
SDF4-201ENST00000263741 BIDP55957 195 aa16.2■□□□□ 0.18
SDF4-201ENST00000263741 FXYD6P3P58550 94 aa16.2■□□□□ 0.18
SDF4-201ENST00000263741 ALG10Q5BKT4 473 aa16.2■□□□□ 0.18
SDF4-201ENST00000263741 SLC35D2Q76EJ3 337 aa16.2■□□□□ 0.18
SDF4-201ENST00000263741 ANKK1Q8NFD2 765 aa16.2■□□□□ 0.18
SDF4-201ENST00000263741 OR10G2Q8NGC3 310 aa16.2■□□□□ 0.18
SDF4-201ENST00000263741 RNASE6Q93091 150 aaKnown RBP16.2■□□□□ 0.18
SDF4-201ENST00000263741 GTPBP3Q969Y2 492 aaKnown RBP16.2■□□□□ 0.18
SDF4-201ENST00000263741 KRCC1Q9NPI7 259 aaPredicted RBP16.2■□□□□ 0.18
SDF4-201ENST00000263741 PLEKHB1Q9UF11 243 aaPredicted RBP16.2■□□□□ 0.18
SDF4-201ENST00000263741 LOC102725191A0A1B0GVB3 256 aa16.19■□□□□ 0.18
SDF4-201ENST00000263741 SLC35F4A4IF30 521 aa16.19■□□□□ 0.18
SDF4-201ENST00000263741 UNC119BA6NIH7 251 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms