RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 NPEPL1Q8NDH3 523 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 ADPRHL1Q8NDY3 354 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 BPIFB6Q8NFQ5 453 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 OR9K2Q8NGE7 335 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 OR9Q1Q8NGQ5 310 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 ZNF519Q8TB69 540 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 TMEM163Q8TC26 289 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 FBLIM1Q8WUP2 373 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 ZNRF4Q8WWF5 429 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 ASB10Q8WXI3 467 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 SGCDQ92629 289 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 HDAC2Q92769 488 aaKnown RBP8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 PTP4A1Q93096 173 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 CPNE4Q96A23 557 aaPredicted RBP8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 SARAFQ96BY9 339 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 ZHX1-C8orf76Q96EF9 292 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 LRR1Q96L50 414 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 TSSK2Q96PF2 358 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 DDOQ99489 341 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 PRRG4Q9BZD6 226 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 PRDM14Q9GZV8 571 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 TIGARQ9NQ88 270 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 ING1Q9UK53 422 aaPredicted RBP8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 BAIAP2Q9UQB8 552 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 RASD1Q9Y272 281 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 NOX1Q9Y5S8 564 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 IGSF10Q6WRI0 2623 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 SLC35F4A4IF30 521 aa8.66□□□□□ -1.02
SNRNP40-201ENST00000263694 RIIAD1A6NNX1 92 aa8.66□□□□□ -1.02
SNRNP40-201ENST00000263694 FAM171A2A8MVW0 826 aa8.66□□□□□ -1.02
SNRNP40-201ENST00000263694 DCTN6O00399 190 aa8.66□□□□□ -1.02
SNRNP40-201ENST00000263694 CYTIPO60759 359 aa8.66□□□□□ -1.02
SNRNP40-201ENST00000263694 TXNDC12O95881 172 aa8.66□□□□□ -1.02
SNRNP40-201ENST00000263694 IGHMP01871 453 aa8.66□□□□□ -1.02
SNRNP40-201ENST00000263694 ACVR2AP27037 513 aa8.66□□□□□ -1.02
SNRNP40-201ENST00000263694 PTGS2P35354 604 aa8.66□□□□□ -1.02
SNRNP40-201ENST00000263694 SNRPGP62308 76 aaKnown RBP8.66□□□□□ -1.02
SNRNP40-201ENST00000263694 PIGFQ07326 219 aa8.66□□□□□ -1.02
SNRNP40-201ENST00000263694 LGALS3BPQ08380 585 aa8.66□□□□□ -1.02
SNRNP40-201ENST00000263694 RASGEF1BQ0VAM2 473 aa8.66□□□□□ -1.02
SNRNP40-201ENST00000263694 KRR1Q13601 381 aaKnown RBP8.66□□□□□ -1.02
SNRNP40-201ENST00000263694 ABLIM2Q6H8Q1 611 aa8.66□□□□□ -1.02
SNRNP40-201ENST00000263694 CREB3L2Q70SY1 520 aa8.66□□□□□ -1.02
SNRNP40-201ENST00000263694 CXXC5Q7LFL8 322 aaKnown RBP8.66□□□□□ -1.02
SNRNP40-201ENST00000263694 JAZF1Q86VZ6 243 aa8.66□□□□□ -1.02
SNRNP40-201ENST00000263694 PM20D2Q8IYS1 436 aa8.66□□□□□ -1.02
SNRNP40-201ENST00000263694 FAM26EQ8N5C1 309 aa8.66□□□□□ -1.02
SNRNP40-201ENST00000263694 ARIH2OSQ8N7S6 290 aa8.66□□□□□ -1.02
SNRNP40-201ENST00000263694 OR51L1Q8NGJ5 315 aa8.66□□□□□ -1.02
SNRNP40-201ENST00000263694 OR8J1Q8NGP2 316 aa8.66□□□□□ -1.02
SNRNP40-201ENST00000263694 ZNF582Q96NG8 517 aaPredicted RBP8.66□□□□□ -1.02
SNRNP40-201ENST00000263694 FOXN4Q96NZ1 517 aa8.66□□□□□ -1.02
SNRNP40-201ENST00000263694 TRIB1Q96RU8 372 aa8.66□□□□□ -1.02
SNRNP40-201ENST00000263694 TEX12Q9BXU0 123 aa8.66□□□□□ -1.02
SNRNP40-201ENST00000263694 RERGLQ9H628 205 aa8.66□□□□□ -1.02
SNRNP40-201ENST00000263694 SRA1Q9HD15 236 aaKnown RBP8.66□□□□□ -1.02
SNRNP40-201ENST00000263694 FANCFQ9NPI8 374 aa8.66□□□□□ -1.02
SNRNP40-201ENST00000263694 SHANK1Q9Y566 2161 aa8.66□□□□□ -1.02
SNRNP40-201ENST00000263694 DOCK7Q96N67 2140 aa8.66□□□□□ -1.02
SNRNP40-201ENST00000263694 NBASA2RRP1 2371 aa8.66□□□□□ -1.02
SNRNP40-201ENST00000263694 SLC22A20A6NK97 555 aa8.65□□□□□ -1.02
SNRNP40-201ENST00000263694 PRR23D1E9PI22 279 aaPredicted RBP8.65□□□□□ -1.02
SNRNP40-201ENST00000263694 DNPH1O43598 174 aa8.65□□□□□ -1.02
SNRNP40-201ENST00000263694 IDH3BO43837 385 aa8.65□□□□□ -1.02
SNRNP40-201ENST00000263694 TRMUO75648 421 aaKnown RBP8.65□□□□□ -1.02
SNRNP40-201ENST00000263694 APOL3O95236 402 aa8.65□□□□□ -1.02
SNRNP40-201ENST00000263694 GPANK1O95872 356 aa8.65□□□□□ -1.02
SNRNP40-201ENST00000263694 TPOP07202 933 aa8.65□□□□□ -1.02
SNRNP40-201ENST00000263694 PRR23D2P0DMB1 279 aaPredicted RBP8.65□□□□□ -1.02
SNRNP40-201ENST00000263694 EDNRAP25101 427 aa8.65□□□□□ -1.02
SNRNP40-201ENST00000263694 FMODQ06828 376 aa8.65□□□□□ -1.02
SNRNP40-201ENST00000263694 NFATC3Q12968 1075 aa8.65□□□□□ -1.02
SNRNP40-201ENST00000263694 KLHL12Q53G59 568 aa8.65□□□□□ -1.02
SNRNP40-201ENST00000263694 KRTCAP3Q53RY4 240 aa8.65□□□□□ -1.02
SNRNP40-201ENST00000263694 AADACL4Q5VUY2 407 aa8.65□□□□□ -1.02
SNRNP40-201ENST00000263694 OTPQ5XKR4 325 aa8.65□□□□□ -1.02
SNRNP40-201ENST00000263694 GPR139Q6DWJ6 353 aa8.65□□□□□ -1.02
SNRNP40-201ENST00000263694 RPTNQ6XPR3 784 aa8.65□□□□□ -1.02
SNRNP40-201ENST00000263694 TUSC5Q8IXB3 177 aa8.65□□□□□ -1.02
SNRNP40-201ENST00000263694 SLC43A2Q8N370 569 aa8.65□□□□□ -1.02
SNRNP40-201ENST00000263694 RPRMLQ8N4K4 120 aa8.65□□□□□ -1.02
SNRNP40-201ENST00000263694 RNF128Q8TEB7 428 aa8.65□□□□□ -1.02
SNRNP40-201ENST00000263694 TRUB1Q8WWH5 349 aaKnown RBP8.65□□□□□ -1.02
SNRNP40-201ENST00000263694 SLX1AQ9BQ83 275 aa8.65□□□□□ -1.02
SNRNP40-201ENST00000263694 NDEL1Q9GZM8 345 aa8.65□□□□□ -1.02
SNRNP40-201ENST00000263694 SYT4Q9H2B2 425 aa8.65□□□□□ -1.02
SNRNP40-201ENST00000263694 OR51V1Q9H2C8 321 aa8.65□□□□□ -1.02
SNRNP40-201ENST00000263694 RPRD1BQ9NQG5 326 aaKnown RBP8.65□□□□□ -1.02
SNRNP40-201ENST00000263694 CLN6Q9NWW5 311 aa8.65□□□□□ -1.02
SNRNP40-201ENST00000263694 ASB6Q9NWX5 421 aa8.65□□□□□ -1.02
SNRNP40-201ENST00000263694 KLHL21Q9UJP4 597 aa8.65□□□□□ -1.02
SNRNP40-201ENST00000263694 MCTS1Q9ULC4 181 aaKnown RBP8.65□□□□□ -1.02
SNRNP40-201ENST00000263694 FLVCR1Q9Y5Y0 555 aa8.65□□□□□ -1.02
SNRNP40-201ENST00000263694 HSPE1-MOB4S4R3N1 261 aa8.65□□□□□ -1.02
SNRNP40-201ENST00000263694 ZFYVE26Q68DK2 2539 aa8.65□□□□□ -1.02
SNRNP40-201ENST00000263694 ARHGAP21Q5T5U3 1957 aa8.65□□□□□ -1.02
SNRNP40-201ENST00000263694 IGKV1D-43A0A0B4J1Z2 117 aa8.65□□□□□ -1.03
SNRNP40-201ENST00000263694 LOC102725191A0A1B0GVB3 256 aa8.65□□□□□ -1.03
SNRNP40-201ENST00000263694 PTGES3LE9PB15 166 aa8.65□□□□□ -1.03
SNRNP40-201ENST00000263694 SLC1A7O00341 560 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms