RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 ZNF337Q9Y3M9 751 aa14.81□□□□□ -0.04
PDZRN3-201ENST00000263666 SNRNP200O75643 2136 aaKnown RBP14.8□□□□□ -0.04
PDZRN3-201ENST00000263666 FRKP42685 505 aaPredicted RBP14.8□□□□□ -0.04
PDZRN3-201ENST00000263666 CBFBQ13951 182 aa14.8□□□□□ -0.04
PDZRN3-201ENST00000263666 FAM53BQ14153 422 aa14.8□□□□□ -0.04
PDZRN3-201ENST00000263666 CD276Q5ZPR3 534 aa14.8□□□□□ -0.04
PDZRN3-201ENST00000263666 MRM1Q6IN84 353 aaKnown RBP14.8□□□□□ -0.04
PDZRN3-201ENST00000263666 C19orf48Q6RUI8 117 aa14.8□□□□□ -0.04
PDZRN3-201ENST00000263666 MARCH3Q86UD3 253 aa14.8□□□□□ -0.04
PDZRN3-201ENST00000263666 INTS14Q96SY0 518 aa14.8□□□□□ -0.04
PDZRN3-201ENST00000263666 IFITM5A6NNB3 132 aa14.8□□□□□ -0.04
PDZRN3-201ENST00000263666 C2CD4DB7Z1M9 353 aa14.8□□□□□ -0.04
PDZRN3-201ENST00000263666 TMIGD3P0DMS9 266 aaPredicted RBP14.8□□□□□ -0.04
PDZRN3-201ENST00000263666 S1PR1P21453 382 aa14.8□□□□□ -0.04
PDZRN3-201ENST00000263666 RABIFP47224 123 aa14.8□□□□□ -0.04
PDZRN3-201ENST00000263666 CXCL12P48061 93 aa14.8□□□□□ -0.04
PDZRN3-201ENST00000263666 MLC1Q15049 377 aa14.8□□□□□ -0.04
PDZRN3-201ENST00000263666 DGAT2L6Q6ZPD8 337 aa14.8□□□□□ -0.04
PDZRN3-201ENST00000263666 C17orf107Q6ZR85 190 aa14.8□□□□□ -0.04
PDZRN3-201ENST00000263666 C16orf52Q8NHV5 167 aa14.8□□□□□ -0.04
PDZRN3-201ENST00000263666 CPNE2Q96FN4 548 aaPredicted RBP14.8□□□□□ -0.04
PDZRN3-201ENST00000263666 SPACA5Q96QH8 159 aa14.8□□□□□ -0.04
PDZRN3-201ENST00000263666 OR2A5Q96R48 311 aa14.8□□□□□ -0.04
PDZRN3-201ENST00000263666 ZNF350Q9GZX5 532 aa14.8□□□□□ -0.04
PDZRN3-201ENST00000263666 PLEKHA1Q9HB21 404 aa14.8□□□□□ -0.04
PDZRN3-201ENST00000263666 EMC7Q9NPA0 242 aa14.8□□□□□ -0.04
PDZRN3-201ENST00000263666 INPP5EQ9NRR6 644 aa14.8□□□□□ -0.04
PDZRN3-201ENST00000263666 TCF20Q9UGU0 1960 aaKnown RBP14.8□□□□□ -0.04
PDZRN3-201ENST00000263666 F5H5P2 479 aa14.8□□□□□ -0.04
PDZRN3-201ENST00000263666 PRAMEF26H0Y7S4 382 aa14.8□□□□□ -0.04
PDZRN3-201ENST00000263666 POU3F4P49335 361 aa14.8□□□□□ -0.04
PDZRN3-201ENST00000263666 C9orf62Q8N4C0 152 aa14.8□□□□□ -0.04
PDZRN3-201ENST00000263666 OR13C3Q8NGS6 347 aa14.8□□□□□ -0.04
PDZRN3-201ENST00000263666 OR10AC1Q8NH08 325 aa14.8□□□□□ -0.04
PDZRN3-201ENST00000263666 PPP1R14AQ96A00 147 aa14.8□□□□□ -0.04
PDZRN3-201ENST00000263666 KCNE5Q9UJ90 142 aa14.8□□□□□ -0.04
PDZRN3-201ENST00000263666 CES1P1Q9UKY3 287 aa14.8□□□□□ -0.04
PDZRN3-201ENST00000263666 IGHV3-20A0A0C4DH32 117 aa14.79□□□□□ -0.04
PDZRN3-201ENST00000263666 C5orf67F2Z3F1 127 aa14.79□□□□□ -0.04
PDZRN3-201ENST00000263666 BHLHE40O14503 412 aa14.79□□□□□ -0.04
PDZRN3-201ENST00000263666 NFYAP23511 347 aaPredicted RBP14.79□□□□□ -0.04
PDZRN3-201ENST00000263666 SLC6A9P48067 706 aa14.79□□□□□ -0.04
PDZRN3-201ENST00000263666 FOXL2P58012 376 aa14.79□□□□□ -0.04
PDZRN3-201ENST00000263666 ZIC1Q15915 447 aa14.79□□□□□ -0.04
PDZRN3-201ENST00000263666 SLC35F3Q8IY50 421 aa14.79□□□□□ -0.04
PDZRN3-201ENST00000263666 SLC25A44Q96H78 314 aaPredicted RBP14.79□□□□□ -0.04
PDZRN3-201ENST00000263666 MRTO4Q9UKD2 239 aaKnown RBP14.79□□□□□ -0.04
PDZRN3-201ENST00000263666 DTX4Q9Y2E6 619 aa14.79□□□□□ -0.04
PDZRN3-201ENST00000263666 NOTCH4Q99466 2003 aa14.79□□□□□ -0.04
PDZRN3-201ENST00000263666 GPR89AB7ZAQ6 455 aa14.79□□□□□ -0.04
PDZRN3-201ENST00000263666 NPIPA5E9PKD4 350 aa14.79□□□□□ -0.04
PDZRN3-201ENST00000263666 DCNP07585 359 aaKnown RBP14.79□□□□□ -0.04
PDZRN3-201ENST00000263666 GPR89BP0CG08 455 aa14.79□□□□□ -0.04
PDZRN3-201ENST00000263666 EIF2B1Q14232 305 aaKnown RBP14.79□□□□□ -0.04
PDZRN3-201ENST00000263666 SMUG1Q53HV7 270 aa14.79□□□□□ -0.04
PDZRN3-201ENST00000263666 COL13A1Q5TAT6 717 aaPredicted RBP14.79□□□□□ -0.04
PDZRN3-201ENST00000263666 CBLN3Q6UW01 205 aa14.79□□□□□ -0.04
PDZRN3-201ENST00000263666 OR2L13Q8N349 312 aa14.79□□□□□ -0.04
PDZRN3-201ENST00000263666 ASB12Q8WXK4 309 aa14.79□□□□□ -0.04
PDZRN3-201ENST00000263666 WDR76Q9H967 626 aa14.79□□□□□ -0.04
PDZRN3-201ENST00000263666 NPIPA1Q9UND3 350 aa14.79□□□□□ -0.04
PDZRN3-201ENST00000263666 A0A087WV48 116 aa14.79□□□□□ -0.04
PDZRN3-201ENST00000263666 TBX19O60806 448 aa14.79□□□□□ -0.04
PDZRN3-201ENST00000263666 THBS1P07996 1170 aa14.79□□□□□ -0.04
PDZRN3-201ENST00000263666 COL9A1P20849 921 aa14.79□□□□□ -0.04
PDZRN3-201ENST00000263666 LSSP48449 732 aa14.79□□□□□ -0.04
PDZRN3-201ENST00000263666 B3GNTL1Q67FW5 361 aaPredicted RBP14.79□□□□□ -0.04
PDZRN3-201ENST00000263666 ZCCHC12Q6PEW1 402 aa14.79□□□□□ -0.04
PDZRN3-201ENST00000263666 LIX1LQ8IVB5 337 aa14.79□□□□□ -0.04
PDZRN3-201ENST00000263666 MS4A3Q96HJ5 214 aa14.79□□□□□ -0.04
PDZRN3-201ENST00000263666 KLHL15Q96M94 604 aa14.79□□□□□ -0.04
PDZRN3-201ENST00000263666 GSX2Q9BZM3 304 aa14.79□□□□□ -0.04
PDZRN3-201ENST00000263666 OR11A1Q9GZK7 315 aa14.79□□□□□ -0.04
PDZRN3-201ENST00000263666 B3GNT2Q9NY97 397 aa14.79□□□□□ -0.04
PDZRN3-201ENST00000263666 EPHA6Q9UF33 1036 aa14.79□□□□□ -0.04
PDZRN3-201ENST00000263666 KCNG2Q9UJ96 466 aa14.79□□□□□ -0.04
PDZRN3-201ENST00000263666 EXOGQ9Y2C4 368 aaKnown RBP14.79□□□□□ -0.04
PDZRN3-201ENST00000263666 TPMTP51580 245 aa14.78□□□□□ -0.04
PDZRN3-201ENST00000263666 S100A10P60903 97 aa14.78□□□□□ -0.04
PDZRN3-201ENST00000263666 Q499Y3 187 aa14.78□□□□□ -0.04
PDZRN3-201ENST00000263666 SIGIRRQ6IA17 410 aa14.78□□□□□ -0.04
PDZRN3-201ENST00000263666 CORO6Q6QEF8 472 aa14.78□□□□□ -0.04
PDZRN3-201ENST00000263666 ZNF584Q8IVC4 421 aa14.78□□□□□ -0.04
PDZRN3-201ENST00000263666 PRSS27Q9BQR3 290 aa14.78□□□□□ -0.04
PDZRN3-201ENST00000263666 TREM1Q9NP99 234 aa14.78□□□□□ -0.04
PDZRN3-201ENST00000263666 SLC17A4Q9Y2C5 497 aa14.78□□□□□ -0.04
PDZRN3-201ENST00000263666 MDC1Q14676 2089 aaKnown RBP14.78□□□□□ -0.04
PDZRN3-201ENST00000263666 CEP250Q9BV73 2442 aa14.78□□□□□ -0.04
PDZRN3-201ENST00000263666 A0A1B0GV50 99 aa14.78□□□□□ -0.04
PDZRN3-201ENST00000263666 BRINP1O60477 761 aa14.78□□□□□ -0.04
PDZRN3-201ENST00000263666 GALR3O60755 368 aaPredicted RBP14.78□□□□□ -0.04
PDZRN3-201ENST00000263666 MYF5P13349 255 aa14.78□□□□□ -0.04
PDZRN3-201ENST00000263666 SLC2A5P22732 501 aa14.78□□□□□ -0.04
PDZRN3-201ENST00000263666 TAS2R20P59543 309 aa14.78□□□□□ -0.04
PDZRN3-201ENST00000263666 PRPS1P60891 318 aa14.78□□□□□ -0.04
PDZRN3-201ENST00000263666 COL28A1Q2UY09 1125 aa14.78□□□□□ -0.04
PDZRN3-201ENST00000263666 KCTD20Q7Z5Y7 419 aa14.78□□□□□ -0.04
PDZRN3-201ENST00000263666 GLB1L2Q8IW92 636 aa14.78□□□□□ -0.04
PDZRN3-201ENST00000263666 MED30Q96HR3 178 aa14.78□□□□□ -0.04
PDZRN3-201ENST00000263666 HPF1Q9NWY4 346 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms