RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 EMC9Q9Y3B6 208 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 ANKRD33BA6NCL7 494 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 K7EPK0 472 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 FADS1O60427 444 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 FBXO24O75426 580 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 MSX1P28360 303 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 GCH1P30793 250 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 CCR6P51684 374 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 MTCP1P56278 107 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 HSF5Q4G112 596 aaPredicted RBP9.92□□□□□ -0.82
CD44-201ENST00000263398 TRMT12Q53H54 448 aaKnown RBP9.92□□□□□ -0.82
CD44-201ENST00000263398 TMEM31Q5JXX7 168 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 FAHD1Q6P587 224 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 Q6ZTK2 550 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 PTOV1Q86YD1 416 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 FAM71E2Q8N5Q1 922 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 NKAIN3Q8N8D7 197 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 OR5L1Q8NGL2 311 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 RHBDD1Q8TEB9 315 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 ZFPM2Q8WW38 1151 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 OR1E3Q8WZA6 343 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 NXPE3Q969Y0 559 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 HHIPL1Q96JK4 782 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 PDCD1LG2Q9BQ51 273 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 RNF167Q9H6Y7 350 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 B3GNT2Q9NY97 397 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 DHCR7Q9UBM7 475 aaKnown RBP9.92□□□□□ -0.82
CD44-201ENST00000263398 ACAD8Q9UKU7 415 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 MRPS28Q9Y2Q9 187 aaKnown RBP9.92□□□□□ -0.82
CD44-201ENST00000263398 KNTC1P50748 2209 aa9.92□□□□□ -0.82
CD44-201ENST00000263398 THSD7AQ9UPZ6 1657 aa9.91□□□□□ -0.82
CD44-201ENST00000263398 A0A1B0GTL3 188 aa9.91□□□□□ -0.82
CD44-201ENST00000263398 SCRG1O75711 98 aa9.91□□□□□ -0.82
CD44-201ENST00000263398 DDAH2O95865 285 aa9.91□□□□□ -0.82
CD44-201ENST00000263398 S100A11P31949 105 aa9.91□□□□□ -0.82
CD44-201ENST00000263398 KIAA1024LP59773 190 aa9.91□□□□□ -0.82
CD44-201ENST00000263398 ACSM1Q08AH1 577 aa9.91□□□□□ -0.82
CD44-201ENST00000263398 MFAP5Q13361 173 aa9.91□□□□□ -0.82
CD44-201ENST00000263398 PAPD4Q6PIY7 484 aaKnown RBP9.91□□□□□ -0.82
CD44-201ENST00000263398 CAMKMTQ7Z624 323 aa9.91□□□□□ -0.82
CD44-201ENST00000263398 SLC51BQ86UW2 128 aa9.91□□□□□ -0.82
CD44-201ENST00000263398 SPNS2Q8IVW8 549 aa9.91□□□□□ -0.82
CD44-201ENST00000263398 LTB4R2Q9NPC1 389 aa9.91□□□□□ -0.82
CD44-201ENST00000263398 ISYNA1Q9NPH2 558 aa9.91□□□□□ -0.82
CD44-201ENST00000263398 MBNL1Q9NR56 388 aaKnown RBP9.91□□□□□ -0.82
CD44-201ENST00000263398 CMC2Q9NRP2 79 aa9.91□□□□□ -0.82
CD44-201ENST00000263398 GPR55Q9Y2T6 319 aaPredicted RBP9.91□□□□□ -0.82
CD44-201ENST00000263398 WIF1Q9Y5W5 379 aa9.91□□□□□ -0.82
CD44-201ENST00000263398 TRAPPC2LH3BP13 241 aa9.91□□□□□ -0.82
CD44-201ENST00000263398 BCAT2O15382 392 aaPredicted RBP9.91□□□□□ -0.82
CD44-201ENST00000263398 MT-ATP6P00846 226 aa9.91□□□□□ -0.82
CD44-201ENST00000263398 ZNF136P52737 540 aa9.91□□□□□ -0.82
CD44-201ENST00000263398 BTN1A1Q13410 526 aa9.91□□□□□ -0.82
CD44-201ENST00000263398 ESCO2Q56NI9 601 aa9.91□□□□□ -0.82
CD44-201ENST00000263398 GLYATL3Q5SZD4 288 aa9.91□□□□□ -0.82
CD44-201ENST00000263398 MOB3CQ70IA8 216 aa9.91□□□□□ -0.82
CD44-201ENST00000263398 SLC16A14Q7RTX9 510 aa9.91□□□□□ -0.82
CD44-201ENST00000263398 SUMF2Q8NBJ7 301 aa9.91□□□□□ -0.82
CD44-201ENST00000263398 AGBL5Q8NDL9 886 aa9.91□□□□□ -0.82
CD44-201ENST00000263398 IL1F10Q8WWZ1 152 aa9.91□□□□□ -0.82
CD44-201ENST00000263398 RASD2Q96D21 266 aa9.91□□□□□ -0.82
CD44-201ENST00000263398 LRRC46Q96FV0 321 aa9.91□□□□□ -0.82
CD44-201ENST00000263398 SLC38A1Q9H2H9 487 aa9.91□□□□□ -0.82
CD44-201ENST00000263398 HS3ST3A1Q9Y663 406 aa9.91□□□□□ -0.82
CD44-201ENST00000263398 LOC100289279A0A1B0GTE1 492 aa9.91□□□□□ -0.82
CD44-201ENST00000263398 CPEP16870 476 aa9.91□□□□□ -0.82
CD44-201ENST00000263398 BLVRBP30043 206 aaPredicted RBP9.91□□□□□ -0.82
CD44-201ENST00000263398 SLC35A1P78382 337 aa9.91□□□□□ -0.82
CD44-201ENST00000263398 ARHGAP11BQ3KRB8 267 aa9.91□□□□□ -0.82
CD44-201ENST00000263398 PYCR3Q53H96 274 aa9.91□□□□□ -0.82
CD44-201ENST00000263398 LIPNQ5VXI9 398 aa9.91□□□□□ -0.82
CD44-201ENST00000263398 GDPD3Q7L5L3 318 aa9.91□□□□□ -0.82
CD44-201ENST00000263398 CPT1CQ8TCG5 803 aa9.91□□□□□ -0.82
CD44-201ENST00000263398 SLC37A2Q8TED4 501 aa9.91□□□□□ -0.82
CD44-201ENST00000263398 CCNL2Q96S94 520 aaPredicted RBP9.91□□□□□ -0.82
CD44-201ENST00000263398 PLEKHM1Q9Y4G2 1056 aa9.91□□□□□ -0.82
CD44-201ENST00000263398 LINC01553A4QN01 128 aa9.9□□□□□ -0.82
CD44-201ENST00000263398 ARRDC5A6NEK1 342 aa9.9□□□□□ -0.82
CD44-201ENST00000263398 SLC34A2O95436 690 aa9.9□□□□□ -0.82
CD44-201ENST00000263398 CPT2P23786 658 aa9.9□□□□□ -0.82
CD44-201ENST00000263398 SLC19A1P41440 591 aa9.9□□□□□ -0.82
CD44-201ENST00000263398 HTR5AP47898 357 aa9.9□□□□□ -0.82
CD44-201ENST00000263398 AFF3P51826 1226 aaKnown RBP9.9□□□□□ -0.82
CD44-201ENST00000263398 BIDP55957 195 aa9.9□□□□□ -0.82
CD44-201ENST00000263398 EEF1A2Q05639 463 aaKnown RBP9.9□□□□□ -0.82
CD44-201ENST00000263398 SLC22A25Q6T423 547 aa9.9□□□□□ -0.82
CD44-201ENST00000263398 OVCH1Q7RTY7 1134 aa9.9□□□□□ -0.82
CD44-201ENST00000263398 TMEM179BQ7Z7N9 219 aa9.9□□□□□ -0.82
CD44-201ENST00000263398 OR9K2Q8NGE7 335 aa9.9□□□□□ -0.82
CD44-201ENST00000263398 OR10K1Q8NGX5 313 aa9.9□□□□□ -0.82
CD44-201ENST00000263398 LINC01599Q8WXQ3 324 aa9.9□□□□□ -0.82
CD44-201ENST00000263398 MYEOVQ96EZ4 313 aa9.9□□□□□ -0.82
CD44-201ENST00000263398 SLC35A4Q96G79 324 aa9.9□□□□□ -0.82
CD44-201ENST00000263398 ASB16Q96NS5 453 aa9.9□□□□□ -0.82
CD44-201ENST00000263398 NMNAT2Q9BZQ4 307 aa9.9□□□□□ -0.82
CD44-201ENST00000263398 GABARAPH6UMI1 98 aa9.9□□□□□ -0.82
CD44-201ENST00000263398 RFXAPO00287 272 aa9.9□□□□□ -0.82
CD44-201ENST00000263398 MRPL33O75394 65 aaKnown RBP9.9□□□□□ -0.82
CD44-201ENST00000263398 PMS2P2O95744 297 aa9.9□□□□□ -0.82
CD44-201ENST00000263398 C1QBP02746 253 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms