RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 ZNF627Q7L945 461 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 DEFB119Q8N690 84 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 NPEPL1Q8NDH3 523 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 SLC2A12Q8TD20 617 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 CABIN1Q9Y6J0 2220 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 A0A087WV62 115 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 GABARAPH6UMI1 98 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 K7EQS6 105 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 CLDN4O14493 209 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 GOSR2O14653 212 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 SC5DO75845 299 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 PLATP00750 562 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 FCARP24071 287 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 DYRK1AQ13627 763 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 FAM199XQ6PEV8 388 aaPredicted RBP11.54□□□□□ -0.56
LIG1-201ENST00000263274 SYS1Q8N2H4 156 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 OR51A4Q8NGJ6 313 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 OR5M1Q8NGP8 315 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 OR14A16Q8NHC5 309 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 SLC25A38Q96DW6 304 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 MOGAT1Q96PD6 335 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 MS4A7Q9GZW8 240 aaPredicted RBP11.54□□□□□ -0.56
LIG1-201ENST00000263274 COMMD4Q9H0A8 199 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 SYT4Q9H2B2 425 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 HEXA-AS1Q9H8Q6 139 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 LYRM4Q9HD34 91 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 MRPS33Q9Y291 106 aaKnown RBP11.54□□□□□ -0.56
LIG1-201ENST00000263274 PRR32B1ATL7 298 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 PYCARD-AS1I3L0S3 204 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 LINC01565O15544 149 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 NKX2-2O95096 273 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 EGFP01133 1207 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 C4BPBP20851 252 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 TAS2R20P59543 309 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 ATXN7L3Q14CW9 347 aaPredicted RBP11.54□□□□□ -0.56
LIG1-201ENST00000263274 FAM69AQ5T7M9 428 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 GPR139Q6DWJ6 353 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 CBLN3Q6UW01 205 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 SLC35F3Q8IY50 421 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 BAHD1Q8TBE0 780 aaPredicted RBP11.54□□□□□ -0.56
LIG1-201ENST00000263274 TM4SF19Q96DZ7 209 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 C7orf50Q9BRJ6 194 aaKnown RBP11.54□□□□□ -0.56
LIG1-201ENST00000263274 NRSN2Q9GZP1 204 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 KLHDC2Q9Y2U9 406 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 PCDHGA5Q9Y5G8 931 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 SERINC4A6NH21 518 aa11.53□□□□□ -0.56
LIG1-201ENST00000263274 DCTN6O00399 190 aa11.53□□□□□ -0.56
LIG1-201ENST00000263274 SPDEFO95238 335 aa11.53□□□□□ -0.56
LIG1-201ENST00000263274 SLC35E2P0CK97 266 aa11.53□□□□□ -0.56
LIG1-201ENST00000263274 SMIM10L1P0DMW3 83 aa11.53□□□□□ -0.56
LIG1-201ENST00000263274 RPS4Y1P22090 263 aaKnown RBP11.53□□□□□ -0.56
LIG1-201ENST00000263274 HNRNPA2B1P22626 353 aaKnown RBP11.53□□□□□ -0.56
LIG1-201ENST00000263274 NFYAP23511 347 aaPredicted RBP11.53□□□□□ -0.56
LIG1-201ENST00000263274 HHEXQ03014 270 aa11.53□□□□□ -0.56
LIG1-201ENST00000263274 DPY19L2P2Q6ZN68 376 aa11.53□□□□□ -0.56
LIG1-201ENST00000263274 BOLLQ8N9W6 283 aaKnown RBP11.53□□□□□ -0.56
LIG1-201ENST00000263274 OR13H1Q8NG92 308 aa11.53□□□□□ -0.56
LIG1-201ENST00000263274 C16orf52Q8NHV5 167 aa11.53□□□□□ -0.56
LIG1-201ENST00000263274 PPP1R14AQ96A00 147 aa11.53□□□□□ -0.56
LIG1-201ENST00000263274 SMIM10Q96HG1 83 aa11.53□□□□□ -0.56
LIG1-201ENST00000263274 EXO5Q9H790 373 aa11.53□□□□□ -0.56
LIG1-201ENST00000263274 WDR76Q9H967 626 aa11.53□□□□□ -0.56
LIG1-201ENST00000263274 HAO2Q9NYQ3 351 aa11.53□□□□□ -0.56
LIG1-201ENST00000263274 NTMQ9P121 344 aa11.53□□□□□ -0.56
LIG1-201ENST00000263274 FARSAQ9Y285 508 aaKnown RBP11.53□□□□□ -0.56
LIG1-201ENST00000263274 SLC6A5Q9Y345 797 aa11.53□□□□□ -0.56
LIG1-201ENST00000263274 ZNF337Q9Y3M9 751 aa11.53□□□□□ -0.56
LIG1-201ENST00000263274 A0A0J9YY10 115 aa11.53□□□□□ -0.56
LIG1-201ENST00000263274 GPRIN2O60269 458 aa11.53□□□□□ -0.56
LIG1-201ENST00000263274 MNDAP41218 407 aa11.53□□□□□ -0.56
LIG1-201ENST00000263274 MGAT2Q10469 447 aa11.53□□□□□ -0.56
LIG1-201ENST00000263274 C9orf50Q5SZB4 431 aa11.53□□□□□ -0.56
LIG1-201ENST00000263274 PWWP2BQ6NUJ5 590 aa11.53□□□□□ -0.56
LIG1-201ENST00000263274 FAM198BQ6UWH4 519 aa11.53□□□□□ -0.56
LIG1-201ENST00000263274 LRRN1Q6UXK5 716 aa11.53□□□□□ -0.56
LIG1-201ENST00000263274 BAIAP2L2Q6UXY1 529 aa11.53□□□□□ -0.56
LIG1-201ENST00000263274 GLB1L2Q8IW92 636 aa11.53□□□□□ -0.56
LIG1-201ENST00000263274 RBPMSQ93062 196 aaKnown RBP11.53□□□□□ -0.56
LIG1-201ENST00000263274 NARS2Q96I59 477 aaKnown RBP11.53□□□□□ -0.56
LIG1-201ENST00000263274 ACOT7O00154 380 aa11.53□□□□□ -0.56
LIG1-201ENST00000263274 GLCEO94923 617 aa11.53□□□□□ -0.56
LIG1-201ENST00000263274 RNH1P13489 461 aaKnown RBP11.53□□□□□ -0.56
LIG1-201ENST00000263274 ZNF35P13682 527 aa11.53□□□□□ -0.56
LIG1-201ENST00000263274 B2MP61769 119 aa11.53□□□□□ -0.56
LIG1-201ENST00000263274 ALKBH1Q13686 389 aaKnown RBP11.53□□□□□ -0.56
LIG1-201ENST00000263274 Q499Y3 187 aa11.53□□□□□ -0.56
LIG1-201ENST00000263274 SCGB2B2Q4G0G5 96 aa11.53□□□□□ -0.56
LIG1-201ENST00000263274 ZCCHC12Q6PEW1 402 aa11.53□□□□□ -0.56
LIG1-201ENST00000263274 ADOQ96SZ5 270 aa11.53□□□□□ -0.56
LIG1-201ENST00000263274 ATG5Q9H1Y0 275 aa11.53□□□□□ -0.56
LIG1-201ENST00000263274 FOXJ3Q9UPW0 622 aa11.53□□□□□ -0.56
LIG1-201ENST00000263274 SESN1Q9Y6P5 492 aa11.53□□□□□ -0.56
LIG1-201ENST00000263274 RP1P56715 2156 aa11.52□□□□□ -0.56
LIG1-201ENST00000263274 COL6A3P12111 3177 aa11.52□□□□□ -0.56
LIG1-201ENST00000263274 TRAV8-7A0A075B6U6 113 aa11.52□□□□□ -0.56
LIG1-201ENST00000263274 LINC00862A6NCI5 91 aa11.52□□□□□ -0.56
LIG1-201ENST00000263274 C17orf51A8MQB3 221 aa11.52□□□□□ -0.56
LIG1-201ENST00000263274 PPM1BO75688 479 aa11.52□□□□□ -0.56
LIG1-201ENST00000263274 KIR2DL1P43626 348 aaPredicted RBP11.52□□□□□ -0.56
LIG1-201ENST00000263274 RAB38P57729 211 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms