RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 SMYD1Q8NB12 490 aa10.6□□□□□ -0.71
TRAF4-202ENST00000262396 C11orf65Q8NCR3 313 aa10.6□□□□□ -0.71
TRAF4-202ENST00000262396 OR6S1Q8NH40 331 aa10.6□□□□□ -0.71
TRAF4-202ENST00000262396 TLCD1Q96CP7 247 aa10.6□□□□□ -0.71
TRAF4-202ENST00000262396 ZNF837Q96EG3 531 aaPredicted RBP10.6□□□□□ -0.71
TRAF4-202ENST00000262396 LRR1Q96L50 414 aa10.6□□□□□ -0.71
TRAF4-202ENST00000262396 MCHR1Q99705 422 aa10.6□□□□□ -0.71
TRAF4-202ENST00000262396 FOXB1Q99853 325 aa10.6□□□□□ -0.71
TRAF4-202ENST00000262396 SYT3Q9BQG1 590 aa10.6□□□□□ -0.71
TRAF4-202ENST00000262396 MS4A5Q9H3V2 200 aa10.6□□□□□ -0.71
TRAF4-202ENST00000262396 B3GAT1Q9P2W7 334 aa10.6□□□□□ -0.71
TRAF4-202ENST00000262396 GPR160Q9UJ42 338 aa10.6□□□□□ -0.71
TRAF4-202ENST00000262396 LEF1Q9UJU2 399 aaPredicted RBP10.6□□□□□ -0.71
TRAF4-202ENST00000262396 TRIM33Q9UPN9 1127 aa10.6□□□□□ -0.71
TRAF4-202ENST00000262396 LOC102725191A0A1B0GVB3 256 aa10.59□□□□□ -0.71
TRAF4-202ENST00000262396 CPSF4LA6NMK7 179 aaKnown RBP10.59□□□□□ -0.71
TRAF4-202ENST00000262396 MCIDASD6RGH6 385 aa10.59□□□□□ -0.71
TRAF4-202ENST00000262396 KPNA4O00629 521 aaPredicted RBP10.59□□□□□ -0.71
TRAF4-202ENST00000262396 TPD52L2O43399 206 aaKnown RBP10.59□□□□□ -0.71
TRAF4-202ENST00000262396 TRAF3IP2O43734 574 aaPredicted RBP10.59□□□□□ -0.71
TRAF4-202ENST00000262396 SYNGR3O43761 229 aa10.59□□□□□ -0.71
TRAF4-202ENST00000262396 TPST1O60507 370 aa10.59□□□□□ -0.71
TRAF4-202ENST00000262396 MT-ATP6P00846 226 aa10.59□□□□□ -0.71
TRAF4-202ENST00000262396 HLA-DOBP13765 273 aa10.59□□□□□ -0.71
TRAF4-202ENST00000262396 NR4A1P22736 598 aa10.59□□□□□ -0.71
TRAF4-202ENST00000262396 GPR6P46095 362 aaPredicted RBP10.59□□□□□ -0.71
TRAF4-202ENST00000262396 GIPRP48546 466 aa10.59□□□□□ -0.71
TRAF4-202ENST00000262396 CDH12P55289 794 aa10.59□□□□□ -0.71
TRAF4-202ENST00000262396 BIDP55957 195 aa10.59□□□□□ -0.71
TRAF4-202ENST00000262396 NKPD1Q17RQ9 610 aa10.59□□□□□ -0.71
TRAF4-202ENST00000262396 PAGE3Q5JUK9 113 aa10.59□□□□□ -0.71
TRAF4-202ENST00000262396 SWT1Q5T5J6 900 aaKnown RBP10.59□□□□□ -0.71
TRAF4-202ENST00000262396 AGBL2Q5U5Z8 902 aa10.59□□□□□ -0.71
TRAF4-202ENST00000262396 SHQ1Q6PI26 577 aaKnown RBP10.59□□□□□ -0.71
TRAF4-202ENST00000262396 TMEM123Q8N131 208 aa10.59□□□□□ -0.71
TRAF4-202ENST00000262396 ZNF786Q8N393 782 aa10.59□□□□□ -0.71
TRAF4-202ENST00000262396 ICA1LQ8NDH6 482 aa10.59□□□□□ -0.71
TRAF4-202ENST00000262396 OR5J2Q8NH18 312 aa10.59□□□□□ -0.71
TRAF4-202ENST00000262396 VANGL1Q8TAA9 524 aaPredicted RBP10.59□□□□□ -0.71
TRAF4-202ENST00000262396 TXNDC15Q96J42 360 aa10.59□□□□□ -0.71
TRAF4-202ENST00000262396 DOK1Q99704 481 aa10.59□□□□□ -0.71
TRAF4-202ENST00000262396 EBF4Q9BQW3 602 aa10.59□□□□□ -0.71
TRAF4-202ENST00000262396 C19orf24Q9BVV8 132 aa10.59□□□□□ -0.71
TRAF4-202ENST00000262396 LRMDAQ9H2I8 198 aa10.59□□□□□ -0.71
TRAF4-202ENST00000262396 KCNN2Q9H2S1 579 aa10.59□□□□□ -0.71
TRAF4-202ENST00000262396 NELFAQ9H3P2 528 aa10.59□□□□□ -0.71
TRAF4-202ENST00000262396 OCEL1Q9H607 264 aa10.59□□□□□ -0.71
TRAF4-202ENST00000262396 TMEM38AQ9H6F2 299 aa10.59□□□□□ -0.71
TRAF4-202ENST00000262396 NARFLQ9H6Q4 476 aa10.59□□□□□ -0.71
TRAF4-202ENST00000262396 CDH20Q9HBT6 801 aa10.59□□□□□ -0.71
TRAF4-202ENST00000262396 MRPL39Q9NYK5 338 aaKnown RBP10.59□□□□□ -0.71
TRAF4-202ENST00000262396 SLC25A37Q9NYZ2 338 aa10.59□□□□□ -0.71
TRAF4-202ENST00000262396 VAPAQ9P0L0 249 aa10.59□□□□□ -0.71
TRAF4-202ENST00000262396 SLAMF8Q9P0V8 285 aa10.59□□□□□ -0.71
TRAF4-202ENST00000262396 TMEFF2Q9UIK5 374 aaPredicted RBP10.59□□□□□ -0.71
TRAF4-202ENST00000262396 NDUFAF1Q9Y375 327 aa10.59□□□□□ -0.71
TRAF4-202ENST00000262396 IGKV1D-42A0A075B6H8 117 aa10.58□□□□□ -0.72
TRAF4-202ENST00000262396 A0A0B4J2E0 115 aa10.58□□□□□ -0.72
TRAF4-202ENST00000262396 A0A1B0GX12 115 aa10.58□□□□□ -0.72
TRAF4-202ENST00000262396 MS4A18H0YCH9 400 aa10.58□□□□□ -0.72
TRAF4-202ENST00000262396 M0R3H8 397 aa10.58□□□□□ -0.72
TRAF4-202ENST00000262396 TCF21O43680 179 aa10.58□□□□□ -0.72
TRAF4-202ENST00000262396 CH25HO95992 272 aa10.58□□□□□ -0.72
TRAF4-202ENST00000262396 BGLAPP02818 100 aa10.58□□□□□ -0.72
TRAF4-202ENST00000262396 OPN1SWP03999 348 aa10.58□□□□□ -0.72
TRAF4-202ENST00000262396 THBS2P35442 1172 aa10.58□□□□□ -0.72
TRAF4-202ENST00000262396 CLRN1P58418 232 aa10.58□□□□□ -0.72
TRAF4-202ENST00000262396 PLP2Q04941 152 aa10.58□□□□□ -0.72
TRAF4-202ENST00000262396 SCGB2A2Q13296 93 aa10.58□□□□□ -0.72
TRAF4-202ENST00000262396 NFYCQ13952 458 aa10.58□□□□□ -0.72
TRAF4-202ENST00000262396 MS4A18Q3C1V0 323 aa10.58□□□□□ -0.72
TRAF4-202ENST00000262396 TMEM53Q6P2H8 277 aa10.58□□□□□ -0.72
TRAF4-202ENST00000262396 ZNF613Q6PF04 617 aa10.58□□□□□ -0.72
TRAF4-202ENST00000262396 RINLQ6ZS11 566 aa10.58□□□□□ -0.72
TRAF4-202ENST00000262396 PXKQ7Z7A4 578 aa10.58□□□□□ -0.72
TRAF4-202ENST00000262396 DHDDSQ86SQ9 333 aa10.58□□□□□ -0.72
TRAF4-202ENST00000262396 MYPOPQ86VE0 399 aaPredicted RBP10.58□□□□□ -0.72
TRAF4-202ENST00000262396 SLC30A8Q8IWU4 369 aa10.58□□□□□ -0.72
TRAF4-202ENST00000262396 SNX33Q8WV41 574 aa10.58□□□□□ -0.72
TRAF4-202ENST00000262396 HPS1Q92902 700 aa10.58□□□□□ -0.72
TRAF4-202ENST00000262396 ZNF566Q969W8 418 aa10.58□□□□□ -0.72
TRAF4-202ENST00000262396 MRPL24Q96A35 216 aaKnown RBP10.58□□□□□ -0.72
TRAF4-202ENST00000262396 MS4A3Q96HJ5 214 aa10.58□□□□□ -0.72
TRAF4-202ENST00000262396 TMEM43Q9BTV4 400 aa10.58□□□□□ -0.72
TRAF4-202ENST00000262396 DENND2DQ9H6A0 471 aaPredicted RBP10.58□□□□□ -0.72
TRAF4-202ENST00000262396 SLCO1B3Q9NPD5 702 aa10.58□□□□□ -0.72
TRAF4-202ENST00000262396 NANSQ9NR45 359 aa10.58□□□□□ -0.72
TRAF4-202ENST00000262396 ZNF346Q9UL40 294 aaKnown RBP10.58□□□□□ -0.72
TRAF4-202ENST00000262396 FZR1Q9UM11 496 aa10.58□□□□□ -0.72
TRAF4-202ENST00000262396 FBN1P35555 2871 aaKnown RBP10.58□□□□□ -0.72
TRAF4-202ENST00000262396 ANK3Q12955 4377 aaKnown RBP10.57□□□□□ -0.72
TRAF4-202ENST00000262396 SLC22A23A1A5C7 686 aa10.57□□□□□ -0.72
TRAF4-202ENST00000262396 LRRN3E7EW58 273 aa10.57□□□□□ -0.72
TRAF4-202ENST00000262396 LYNX1G3V0Z9 82 aa10.57□□□□□ -0.72
TRAF4-202ENST00000262396 M0QX08 132 aa10.57□□□□□ -0.72
TRAF4-202ENST00000262396 PLPP3O14495 311 aa10.57□□□□□ -0.72
TRAF4-202ENST00000262396 PPIHO43447 177 aaKnown RBP10.57□□□□□ -0.72
TRAF4-202ENST00000262396 HPRP00739 348 aa10.57□□□□□ -0.72
TRAF4-202ENST00000262396 PTHP01270 115 aa10.57□□□□□ -0.72
TRAF4-202ENST00000262396 LCKP06239 509 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms