RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 ARHGAP19Q14CB8 494 aa11.84□□□□□ -0.51
SNX1-201ENST00000261889 ARHGAP11BQ3KRB8 267 aa11.84□□□□□ -0.51
SNX1-201ENST00000261889 TMEM35AQ53FP2 167 aa11.84□□□□□ -0.51
SNX1-201ENST00000261889 ZNF660Q6AZW8 331 aaPredicted RBP11.84□□□□□ -0.51
SNX1-201ENST00000261889 GAS2L1Q99501 681 aaPredicted RBP11.84□□□□□ -0.51
SNX1-201ENST00000261889 ALG12Q9BV10 488 aa11.84□□□□□ -0.51
SNX1-201ENST00000261889 ZNF350Q9GZX5 532 aa11.84□□□□□ -0.51
SNX1-201ENST00000261889 FRRS1LQ9P0K9 344 aa11.84□□□□□ -0.51
SNX1-201ENST00000261889 ADAM29Q9UKF5 820 aa11.84□□□□□ -0.51
SNX1-201ENST00000261889 NPFFR2Q9Y5X5 522 aa11.84□□□□□ -0.51
SNX1-201ENST00000261889 TBX19O60806 448 aa11.84□□□□□ -0.51
SNX1-201ENST00000261889 ATG12O94817 140 aa11.84□□□□□ -0.51
SNX1-201ENST00000261889 TPMTP51580 245 aa11.84□□□□□ -0.51
SNX1-201ENST00000261889 ADPRHP54922 357 aa11.84□□□□□ -0.51
SNX1-201ENST00000261889 CDCP2Q5VXM1 449 aa11.84□□□□□ -0.51
SNX1-201ENST00000261889 KXD1Q9BQD3 176 aa11.84□□□□□ -0.51
SNX1-201ENST00000261889 PDCD10Q9BUL8 212 aa11.84□□□□□ -0.51
SNX1-201ENST00000261889 ACTR6Q9GZN1 396 aa11.84□□□□□ -0.51
SNX1-201ENST00000261889 C14orf105Q9NVL8 296 aa11.84□□□□□ -0.51
SNX1-201ENST00000261889 PCNX3Q9H6A9 2034 aa11.83□□□□□ -0.52
SNX1-201ENST00000261889 H0YGG7 62 aa11.83□□□□□ -0.52
SNX1-201ENST00000261889 B3GALT2O43825 422 aa11.83□□□□□ -0.52
SNX1-201ENST00000261889 SDC3O75056 442 aa11.83□□□□□ -0.52
SNX1-201ENST00000261889 PTP4A3O75365 173 aa11.83□□□□□ -0.52
SNX1-201ENST00000261889 PTBP1P26599 531 aaKnown RBP eCLIP11.83□□□□□ -0.52
SNX1-201ENST00000261889 MST1P26927 711 aa11.83□□□□□ -0.52
SNX1-201ENST00000261889 SLC6A6P31641 620 aa11.83□□□□□ -0.52
SNX1-201ENST00000261889 IGFALSP35858 605 aa11.83□□□□□ -0.52
SNX1-201ENST00000261889 AKR1C3P42330 323 aa11.83□□□□□ -0.52
SNX1-201ENST00000261889 ART1P52961 327 aa11.83□□□□□ -0.52
SNX1-201ENST00000261889 ARF3P61204 181 aaPredicted RBP11.83□□□□□ -0.52
SNX1-201ENST00000261889 DUSP8Q13202 625 aa11.83□□□□□ -0.52
SNX1-201ENST00000261889 RAB30Q15771 203 aa11.83□□□□□ -0.52
SNX1-201ENST00000261889 TANGO2Q6ICL3 276 aa11.83□□□□□ -0.52
SNX1-201ENST00000261889 FAM122CQ6P4D5 195 aa11.83□□□□□ -0.52
SNX1-201ENST00000261889 OR2L13Q8N349 312 aa11.83□□□□□ -0.52
SNX1-201ENST00000261889 OR2L8Q8NGY9 312 aa11.83□□□□□ -0.52
SNX1-201ENST00000261889 SLC25A36Q96CQ1 311 aa11.83□□□□□ -0.52
SNX1-201ENST00000261889 ZNF471Q9BX82 626 aaPredicted RBP11.83□□□□□ -0.52
SNX1-201ENST00000261889 SYT4Q9H2B2 425 aa11.83□□□□□ -0.52
SNX1-201ENST00000261889 TCEAL2Q9H3H9 227 aaPredicted RBP11.83□□□□□ -0.52
SNX1-201ENST00000261889 POFUT1Q9H488 388 aa11.83□□□□□ -0.52
SNX1-201ENST00000261889 ZNF337Q9Y3M9 751 aa11.83□□□□□ -0.52
SNX1-201ENST00000261889 AUP1Q9Y679 476 aa11.83□□□□□ -0.52
SNX1-201ENST00000261889 C1QTNF3-AMACRE9PGA6 284 aa11.83□□□□□ -0.52
SNX1-201ENST00000261889 AIPO00170 330 aa11.83□□□□□ -0.52
SNX1-201ENST00000261889 LMX1BO60663 402 aa11.83□□□□□ -0.52
SNX1-201ENST00000261889 IFNGP01579 166 aa11.83□□□□□ -0.52
SNX1-201ENST00000261889 GAB4Q2WGN9 574 aa11.83□□□□□ -0.52
SNX1-201ENST00000261889 KCTD9Q7L273 389 aa11.83□□□□□ -0.52
SNX1-201ENST00000261889 GALNT16Q8N428 558 aa11.83□□□□□ -0.52
SNX1-201ENST00000261889 FBXO17Q96EF6 278 aa11.83□□□□□ -0.52
SNX1-201ENST00000261889 ATG5Q9H1Y0 275 aa11.83□□□□□ -0.52
SNX1-201ENST00000261889 C12orf10Q9HB07 376 aa11.83□□□□□ -0.52
SNX1-201ENST00000261889 IFT46Q9NQC8 304 aa11.83□□□□□ -0.52
SNX1-201ENST00000261889 PHPT1Q9NRX4 125 aaPredicted RBP11.83□□□□□ -0.52
SNX1-201ENST00000261889 ABRACLQ9P1F3 81 aa11.83□□□□□ -0.52
SNX1-201ENST00000261889 COPZ2Q9P299 210 aa11.83□□□□□ -0.52
SNX1-201ENST00000261889 SESN1Q9Y6P5 492 aa11.83□□□□□ -0.52
SNX1-201ENST00000261889 F5H5P2 479 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 DBIP07108 87 aaKnown RBP11.82□□□□□ -0.52
SNX1-201ENST00000261889 CBR1P16152 277 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 MAOAP21397 527 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 ZP3P21754 424 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 SRSF3P84103 164 aaKnown RBP11.82□□□□□ -0.52
SNX1-201ENST00000261889 SERTAD2Q14140 314 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 ARHGAP40Q5TG30 622 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 TMEM184AQ6ZMB5 413 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 MARCH3Q86UD3 253 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 ETFBKMTQ8IXQ9 262 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 GJD3Q8N144 294 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 TMEM185AQ8NFB2 350 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 OR1E3Q8WZA6 343 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 MRPS24Q96EL2 167 aaKnown RBP11.82□□□□□ -0.52
SNX1-201ENST00000261889 COL4A2P08572 1712 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 GABARAPH6UMI1 98 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 EIF1AYO14602 144 aaKnown RBP11.82□□□□□ -0.52
SNX1-201ENST00000261889 GALR3O60755 368 aaPredicted RBP11.82□□□□□ -0.52
SNX1-201ENST00000261889 APBB3O95704 486 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 GABRA1P14867 456 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 GK2Q14410 553 aaPredicted RBP11.82□□□□□ -0.52
SNX1-201ENST00000261889 NPEPL1Q8NDH3 523 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 OR1J2Q8NGS2 313 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 NSMAFQ92636 917 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 SPACA5Q96QH8 159 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 SLC38A3Q99624 504 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 MRM2Q9UI43 246 aaKnown RBP11.82□□□□□ -0.52
SNX1-201ENST00000261889 KCNG2Q9UJ96 466 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 STON1Q9Y6Q2 735 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 TICRRQ7Z2Z1 1910 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 TMEM265A0A087WTH1 108 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 A0A0B4J2E0 115 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 A0A1B0GX12 115 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 UBE2QL1A1L167 161 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 EEF1E1-BLOC1S5C9J1V9 151 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 AGPAT2O15120 278 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 AKR7A3O95154 331 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 KAT7O95251 611 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 ITGA5P08648 1049 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 EIF1AXP47813 144 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms