RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 TIMM23BQ5SRD1 257 aa16.52■□□□□ 0.24
CYSTM1-201ENST00000261811 CARD17Q5XLA6 110 aa16.52■□□□□ 0.24
CYSTM1-201ENST00000261811 FAM205BPQ63HN1 556 aa16.52■□□□□ 0.24
CYSTM1-201ENST00000261811 KLHL24Q6TFL4 600 aa16.52■□□□□ 0.24
CYSTM1-201ENST00000261811 C17orf78Q8N4C9 275 aa16.52■□□□□ 0.24
CYSTM1-201ENST00000261811 OR13C2Q8NGS9 318 aa16.52■□□□□ 0.24
CYSTM1-201ENST00000261811 GNPDA2Q8TDQ7 276 aa16.52■□□□□ 0.24
CYSTM1-201ENST00000261811 ZC3HAV1LQ96H79 300 aaKnown RBP16.52■□□□□ 0.24
CYSTM1-201ENST00000261811 TXNDC15Q96J42 360 aa16.52■□□□□ 0.24
CYSTM1-201ENST00000261811 RAB3IPQ96QF0 476 aaPredicted RBP16.52■□□□□ 0.24
CYSTM1-201ENST00000261811 TNFRSF13CQ96RJ3 184 aa16.52■□□□□ 0.24
CYSTM1-201ENST00000261811 FUZQ9BT04 418 aa16.52■□□□□ 0.24
CYSTM1-201ENST00000261811 CCM2LQ9NUG4 571 aaPredicted RBP16.52■□□□□ 0.24
CYSTM1-201ENST00000261811 TRAV27A0A087WT01 109 aa16.51■□□□□ 0.23
CYSTM1-201ENST00000261811 RPL36A-HNRNPH2H7BZ11 118 aa16.51■□□□□ 0.23
CYSTM1-201ENST00000261811 RAD51DO75771 328 aa16.51■□□□□ 0.23
CYSTM1-201ENST00000261811 NDUFB2O95178 105 aa16.51■□□□□ 0.23
CYSTM1-201ENST00000261811 IGHG1P01857 330 aa16.51■□□□□ 0.23
CYSTM1-201ENST00000261811 PAX7P23759 505 aa16.51■□□□□ 0.23
CYSTM1-201ENST00000261811 CCKARP32238 428 aa16.51■□□□□ 0.23
CYSTM1-201ENST00000261811 CSNK1A1P48729 337 aa16.51■□□□□ 0.23
CYSTM1-201ENST00000261811 CLRN1P58418 232 aa16.51■□□□□ 0.23
CYSTM1-201ENST00000261811 CTXN1P60606 82 aa16.51■□□□□ 0.23
CYSTM1-201ENST00000261811 LSM11P83369 360 aaKnown RBP eCLIP16.51■□□□□ 0.23
CYSTM1-201ENST00000261811 ROR2Q01974 943 aaKnown RBP16.51■□□□□ 0.23
CYSTM1-201ENST00000261811 TLE4Q04727 773 aa16.51■□□□□ 0.23
CYSTM1-201ENST00000261811 YTHDF3Q7Z739 585 aaKnown RBP16.51■□□□□ 0.23
CYSTM1-201ENST00000261811 C20orf196Q8IYI0 205 aa16.51■□□□□ 0.23
CYSTM1-201ENST00000261811 TMEM123Q8N131 208 aa16.51■□□□□ 0.23
CYSTM1-201ENST00000261811 MOSPD2Q8NHP6 518 aa16.51■□□□□ 0.23
CYSTM1-201ENST00000261811 FNDC8Q8TC99 324 aa16.51■□□□□ 0.23
CYSTM1-201ENST00000261811 ALKBH3Q96Q83 286 aaPredicted RBP16.51■□□□□ 0.23
CYSTM1-201ENST00000261811 TXNIPQ9H3M7 391 aa16.51■□□□□ 0.23
CYSTM1-201ENST00000261811 A6NIZ1 184 aa16.5■□□□□ 0.23
CYSTM1-201ENST00000261811 OR5H1A6NKK0 313 aa16.5■□□□□ 0.23
CYSTM1-201ENST00000261811 A6NNC1 897 aa16.5■□□□□ 0.23
CYSTM1-201ENST00000261811 M0R3G1 203 aa16.5■□□□□ 0.23
CYSTM1-201ENST00000261811 PDLIM1O00151 329 aa16.5■□□□□ 0.23
CYSTM1-201ENST00000261811 FKBP6O75344 327 aa16.5■□□□□ 0.23
CYSTM1-201ENST00000261811 ENTPD5O75356 428 aa16.5■□□□□ 0.23
CYSTM1-201ENST00000261811 UPK3AO75631 287 aa16.5■□□□□ 0.23
CYSTM1-201ENST00000261811 ITGA5P08648 1049 aa16.5■□□□□ 0.23
CYSTM1-201ENST00000261811 CDH2P19022 906 aaPredicted RBP16.5■□□□□ 0.23
CYSTM1-201ENST00000261811 FPR3P25089 353 aa16.5■□□□□ 0.23
CYSTM1-201ENST00000261811 RAP1BP61224 184 aa16.5■□□□□ 0.23
CYSTM1-201ENST00000261811 RAP1AP62834 184 aa16.5■□□□□ 0.23
CYSTM1-201ENST00000261811 TSC22D1Q15714 1073 aa16.5■□□□□ 0.23
CYSTM1-201ENST00000261811 ACKR1Q16570 336 aa16.5■□□□□ 0.23
CYSTM1-201ENST00000261811 C9orf135Q5VTT2 229 aa16.5■□□□□ 0.23
CYSTM1-201ENST00000261811 C1orf94Q6P1W5 598 aa16.5■□□□□ 0.23
CYSTM1-201ENST00000261811 TMEM200AQ86VY9 491 aa16.5■□□□□ 0.23
CYSTM1-201ENST00000261811 MEX3DQ86XN8 651 aaKnown RBP16.5■□□□□ 0.23
CYSTM1-201ENST00000261811 PAPD5Q8NDF8 572 aaKnown RBP16.5■□□□□ 0.23
CYSTM1-201ENST00000261811 MUS81Q96NY9 551 aa16.5■□□□□ 0.23
CYSTM1-201ENST00000261811 ULBP2Q9BZM5 246 aa16.5■□□□□ 0.23
CYSTM1-201ENST00000261811 CRLF2Q9HC73 371 aa16.5■□□□□ 0.23
CYSTM1-201ENST00000261811 GRHPRQ9UBQ7 328 aa16.5■□□□□ 0.23
CYSTM1-201ENST00000261811 U3KQV3 271 aa16.5■□□□□ 0.23
CYSTM1-201ENST00000261811 CELSR2Q9HCU4 2923 aa16.5■□□□□ 0.23
CYSTM1-201ENST00000261811 CDC42EP2O14613 210 aa16.49■□□□□ 0.23
CYSTM1-201ENST00000261811 DEAF1O75398 565 aaPredicted RBP16.49■□□□□ 0.23
CYSTM1-201ENST00000261811 E2F6O75461 281 aa16.49■□□□□ 0.23
CYSTM1-201ENST00000261811 WNT11O96014 354 aa16.49■□□□□ 0.23
CYSTM1-201ENST00000261811 ACADSP16219 412 aa16.49■□□□□ 0.23
CYSTM1-201ENST00000261811 CRYGSP22914 178 aa16.49■□□□□ 0.23
CYSTM1-201ENST00000261811 LIMS1P48059 325 aa16.49■□□□□ 0.23
CYSTM1-201ENST00000261811 RPL27P61353 136 aaKnown RBP16.49■□□□□ 0.23
CYSTM1-201ENST00000261811 MELKQ14680 651 aa16.49■□□□□ 0.23
CYSTM1-201ENST00000261811 PPA1Q15181 289 aa16.49■□□□□ 0.23
CYSTM1-201ENST00000261811 GABRA6Q16445 453 aa16.49■□□□□ 0.23
CYSTM1-201ENST00000261811 MICAQ29983 383 aa16.49■□□□□ 0.23
CYSTM1-201ENST00000261811 RPL13AP3Q6NVV1 102 aa16.49■□□□□ 0.23
CYSTM1-201ENST00000261811 SMARCD3Q6STE5 483 aa16.49■□□□□ 0.23
CYSTM1-201ENST00000261811 NHLRC1Q6VVB1 395 aa16.49■□□□□ 0.23
CYSTM1-201ENST00000261811 ZER1Q7Z7L7 766 aa16.49■□□□□ 0.23
CYSTM1-201ENST00000261811 WFDC8Q8IUA0 241 aa16.49■□□□□ 0.23
CYSTM1-201ENST00000261811 ASB10Q8WXI3 467 aa16.49■□□□□ 0.23
CYSTM1-201ENST00000261811 POLDIP3Q9BY77 421 aaKnown RBP16.49■□□□□ 0.23
CYSTM1-201ENST00000261811 GPR35Q9HC97 309 aa16.49■□□□□ 0.23
CYSTM1-201ENST00000261811 MOV10Q9HCE1 1003 aaKnown RBP16.49■□□□□ 0.23
CYSTM1-201ENST00000261811 OBP2BQ9NPH6 170 aa16.49■□□□□ 0.23
CYSTM1-201ENST00000261811 GLTPQ9NZD2 209 aa16.49■□□□□ 0.23
CYSTM1-201ENST00000261811 DNAJB9Q9UBS3 223 aa16.49■□□□□ 0.23
CYSTM1-201ENST00000261811 SIGLEC7Q9Y286 467 aa16.49■□□□□ 0.23
CYSTM1-201ENST00000261811 POFUT2Q9Y2G5 429 aa16.49■□□□□ 0.23
CYSTM1-201ENST00000261811 AMDHD2Q9Y303 409 aa16.49■□□□□ 0.23
CYSTM1-201ENST00000261811 MAGED1Q9Y5V3 778 aaPredicted RBP16.49■□□□□ 0.23
CYSTM1-201ENST00000261811 XKRYO14609 159 aa16.48■□□□□ 0.23
CYSTM1-201ENST00000261811 IGHMP01871 453 aa16.48■□□□□ 0.23
CYSTM1-201ENST00000261811 CD14P08571 375 aa16.48■□□□□ 0.23
CYSTM1-201ENST00000261811 FCGR1AP12314 374 aa16.48■□□□□ 0.23
CYSTM1-201ENST00000261811 HOXB1P14653 301 aaPredicted RBP16.48■□□□□ 0.23
CYSTM1-201ENST00000261811 GSTM3P21266 225 aa16.48■□□□□ 0.23
CYSTM1-201ENST00000261811 RPS6KA3P51812 740 aa16.48■□□□□ 0.23
CYSTM1-201ENST00000261811 NR1H2P55055 460 aa16.48■□□□□ 0.23
CYSTM1-201ENST00000261811 UBE2NP61088 152 aaKnown RBP16.48■□□□□ 0.23
CYSTM1-201ENST00000261811 GABPB1Q06547 395 aaPredicted RBP16.48■□□□□ 0.23
CYSTM1-201ENST00000261811 TSPAN31Q12999 210 aa16.48■□□□□ 0.23
CYSTM1-201ENST00000261811 TOP3AQ13472 1001 aaPredicted RBP16.48■□□□□ 0.23
CYSTM1-201ENST00000261811 TAB1Q15750 504 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms