RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 FITM1A5D6W6 292 aa9.02□□□□□ -0.97
CTDSPL2-201ENST00000260327 TGOLN2O43493 480 aa9.02□□□□□ -0.97
CTDSPL2-201ENST00000260327 LAP3P28838 519 aa9.02□□□□□ -0.97
CTDSPL2-201ENST00000260327 HOXC13P31276 330 aa9.02□□□□□ -0.97
CTDSPL2-201ENST00000260327 POLR2HP52434 150 aaKnown RBP9.02□□□□□ -0.97
CTDSPL2-201ENST00000260327 FOXK2Q01167 660 aa9.02□□□□□ -0.97
CTDSPL2-201ENST00000260327 NIPAL3Q6P499 406 aa9.02□□□□□ -0.97
CTDSPL2-201ENST00000260327 ZDHHC12Q96GR4 267 aa9.02□□□□□ -0.97
CTDSPL2-201ENST00000260327 MYADMQ96S97 322 aa9.02□□□□□ -0.97
CTDSPL2-201ENST00000260327 STEAP1Q9UHE8 339 aa9.02□□□□□ -0.97
CTDSPL2-201ENST00000260327 ZNF337Q9Y3M9 751 aa9.02□□□□□ -0.97
CTDSPL2-201ENST00000260327 MYH14Q7Z406 1995 aaKnown RBP9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 GPR171O14626 319 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 CBX7O95931 251 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 SBK2P0C263 348 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 PDE7AQ13946 482 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 PRAMEF8Q5VWM4 474 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 PRAMEF7Q5VXH5 474 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 SLCO4C1Q6ZQN7 724 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 OR52R1Q8NGF1 315 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 OLIG1Q8TAK6 271 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 CASD1Q96PB1 797 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 FAM103A1Q9BTL3 118 aaKnown RBP9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 TMEM30AQ9NV96 361 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 KCNIP1Q9NZI2 227 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 VDAC3Q9Y277 283 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 SLC35A3Q9Y2D2 325 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 SELENOFO60613 162 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 PTBP1P26599 531 aaKnown RBP eCLIP9.01□□□□□ -0.974e-6■■■■■ 31.7
CTDSPL2-201ENST00000260327 EVX1P49640 407 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 FAM69BQ5VUD6 431 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 XAF1Q6GPH4 301 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 GKN2Q86XP6 184 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 SLC22A12Q96S37 553 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 ZFYVE21Q9BQ24 234 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 ALG12Q9BV10 488 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 SLCO5A1Q9H2Y9 848 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 C11orf49Q9H6J7 331 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 HRASLSQ9HDD0 168 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 WSB2Q9NYS7 404 aaPredicted RBP9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 MED16Q9Y2X0 877 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 ZNF587BE7ETH6 402 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 FOXE1O00358 373 aaPredicted RBP9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 CYBAP13498 195 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 SFTPDP35247 375 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 TAS2R30P59541 319 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 KCNJ10P78508 379 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 LTB4RQ15722 352 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 LDLRAD1Q5T700 205 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 FAM58AQ8N1B3 248 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 TMEM99Q8N816 258 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 OR52N1Q8NH53 320 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 FAM3DQ96BQ1 224 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 CSF3RQ99062 836 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 SLC46A2Q9BY10 475 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 ZNF385DQ9H6B1 395 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 MED17Q9NVC6 651 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 ZNF593O00488 134 aaPredicted RBP9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 AIFM1O95831 613 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 MT-CO2P00403 227 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 SLC6A11P48066 632 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 MRPL19P49406 292 aaKnown RBP9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 TAS2R46P59540 309 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 DLX2Q07687 328 aaPredicted RBP9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 Q6ZRG5 221 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 MBOAT2Q6ZWT7 520 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 ZNF561Q8N587 486 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 OR8D4Q8NGM9 314 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 UBTD2Q8WUN7 234 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 CLSTN3Q9BQT9 956 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 FKRPQ9H9S5 495 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 ABI3Q9P2A4 366 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 ZNF724A8MTY0 619 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 BET1O15155 118 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 CLEC3AO75596 197 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 SLC2A10O95528 541 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 OR2T7P0C7T2 308 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 ZNF43P17038 809 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 CSNK1DP48730 415 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 GLYATL3Q5SZD4 288 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 OR2T27Q8NH04 317 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 ISG20Q96AZ6 181 aaKnown RBP9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 GAS2L1Q99501 681 aaPredicted RBP9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 TOLLIPQ9H0E2 274 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 GAREM1Q9H706 876 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 SLC39A9Q9NUM3 307 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 TP53TG5Q9Y2B4 290 aa9.01□□□□□ -0.97
CTDSPL2-201ENST00000260327 TCRBV21S2A2A0A5A6 115 aa9□□□□□ -0.97
CTDSPL2-201ENST00000260327 OR5H14A6NHG9 310 aa9□□□□□ -0.97
CTDSPL2-201ENST00000260327 GABARAPH6UMI1 98 aa9□□□□□ -0.97
CTDSPL2-201ENST00000260327 SLC36A2Q495M3 483 aa9□□□□□ -0.97
CTDSPL2-201ENST00000260327 CLLU1Q5K131 121 aa9□□□□□ -0.97
CTDSPL2-201ENST00000260327 MMP21Q8N119 569 aa9□□□□□ -0.97
CTDSPL2-201ENST00000260327 GPR137CQ8N3F9 429 aa9□□□□□ -0.97
CTDSPL2-201ENST00000260327 ZNF511Q8NB15 262 aa9□□□□□ -0.97
CTDSPL2-201ENST00000260327 OR2A14Q96R47 310 aa9□□□□□ -0.97
CTDSPL2-201ENST00000260327 TRAF4Q9BUZ4 470 aaPredicted RBP9□□□□□ -0.97
CTDSPL2-201ENST00000260327 CHST8Q9H2A9 424 aa9□□□□□ -0.97
CTDSPL2-201ENST00000260327 KLHL13Q9P2N7 655 aa9□□□□□ -0.97
CTDSPL2-201ENST00000260327 CGGBP1Q9UFW8 167 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms