RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 OR2T27Q8NH04 317 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 SLC25A28Q96A46 364 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 LYSMD1Q96S90 227 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 SULT4A1Q9BR01 284 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 ALG12Q9BV10 488 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 PLEKHM1Q9Y4G2 1056 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 URGCP-MRPS24S4R325 110 aa11.32□□□□□ -0.6
USP30-201ENST00000257548 MED19A0JLT2 244 aaPredicted RBP11.31□□□□□ -0.6
USP30-201ENST00000257548 LINC00587B1AMM8 73 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 PTP4A3O75365 173 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 VSIG10L2P0DP72 767 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 TPT1P13693 172 aaKnown RBP11.31□□□□□ -0.6
USP30-201ENST00000257548 BCL6P41182 706 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 RPS10P46783 165 aaKnown RBP11.31□□□□□ -0.6
USP30-201ENST00000257548 LIMK1P53667 647 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 ATP1B3P54709 279 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 DUSP2Q05923 314 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 PRDX1Q06830 199 aaKnown RBP11.31□□□□□ -0.6
USP30-201ENST00000257548 SERTAD2Q14140 314 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 ITPRIPL2Q3MIP1 535 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 ARTNQ5T4W7 220 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 ZNF529Q6P280 563 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 ULK3Q6PHR2 472 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 HSD17B13Q7Z5P4 300 aaPredicted RBP11.31□□□□□ -0.6
USP30-201ENST00000257548 WDSUB1Q8N9V3 476 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 MS4A4EQ96PG1 132 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 PHB2Q99623 299 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 CPEB1Q9BZB8 566 aaKnown RBP11.31□□□□□ -0.6
USP30-201ENST00000257548 ASH2LQ9UBL3 628 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 CACNA1DQ01668 2161 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 OR2W5A6NFC9 320 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 SEC14L5O43304 696 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 ADAMTS4O75173 837 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 GLI4P10075 376 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 ITGB8P26012 769 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 ACTR1BP42025 376 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 RAB28P51157 221 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 ACTR1AP61163 376 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 HTRA3P83110 453 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 EIF2S3LQ2VIR3 472 aaKnown RBP11.31□□□□□ -0.6
USP30-201ENST00000257548 STAC2Q6ZMT1 411 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 SLC29A4Q7RTT9 530 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 OR2L5Q8NG80 312 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 MFSD8Q8NHS3 518 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 GPR148Q8TDV2 347 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 INTS14Q96SY0 518 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 ZNF700Q9H0M5 742 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 APMAPQ9HDC9 416 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 PHPT1Q9NRX4 125 aaPredicted RBP11.31□□□□□ -0.6
USP30-201ENST00000257548 MIOXQ9UGB7 285 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 NDRG3Q9UGV2 375 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 ICKQ9UPZ9 632 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 DHDHQ9UQ10 334 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 DICER1Q9UPY3 1922 aaKnown RBP11.31□□□□□ -0.6
USP30-201ENST00000257548 ZNF85Q03923 595 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 IRF5Q13568 498 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 GLYATL3Q5SZD4 288 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 PEG10Q86TG7 708 aaKnown RBP11.31□□□□□ -0.6
USP30-201ENST00000257548 ETFBKMTQ8IXQ9 262 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 IL17RCQ8NAC3 791 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 OR13C9Q8NGT0 318 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 ELP5Q8TE02 316 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 CST11Q9H112 138 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 ADGRL4Q9HBW9 690 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 MOKQ9UQ07 419 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 SLC45A1Q9Y2W3 748 aa11.31□□□□□ -0.6
USP30-201ENST00000257548 C1QTNF3-AMACRE9PGA6 284 aa11.3□□□□□ -0.6
USP30-201ENST00000257548 RPS15P62841 145 aaKnown RBP11.3□□□□□ -0.6
USP30-201ENST00000257548 DEFA6Q01524 100 aa11.3□□□□□ -0.6
USP30-201ENST00000257548 FABP9Q0Z7S8 132 aa11.3□□□□□ -0.6
USP30-201ENST00000257548 DEFB110Q30KQ9 67 aa11.3□□□□□ -0.6
USP30-201ENST00000257548 Q499Y3 187 aa11.3□□□□□ -0.6
USP30-201ENST00000257548 RPL13AP3Q6NVV1 102 aa11.3□□□□□ -0.6
USP30-201ENST00000257548 TCTEX1D2Q8WW35 142 aa11.3□□□□□ -0.6
USP30-201ENST00000257548 SOSTQ9BQB4 213 aa11.3□□□□□ -0.6
USP30-201ENST00000257548 ANKRD19PQ9H560 264 aa11.3□□□□□ -0.6
USP30-201ENST00000257548 GAREM1Q9H706 876 aa11.3□□□□□ -0.6
USP30-201ENST00000257548 PRSS16Q9NQE7 514 aa11.3□□□□□ -0.6
USP30-201ENST00000257548 REV3LO60673 3130 aa11.3□□□□□ -0.6
USP30-201ENST00000257548 IGHA1P01876 353 aa11.3□□□□□ -0.6
USP30-201ENST00000257548 NME1P15531 152 aaKnown RBP11.3□□□□□ -0.6
USP30-201ENST00000257548 RGS19P49795 217 aa11.3□□□□□ -0.6
USP30-201ENST00000257548 MFSD12Q6NUT3 480 aa11.3□□□□□ -0.6
USP30-201ENST00000257548 LRRC69Q6ZNQ3 347 aa11.3□□□□□ -0.6
USP30-201ENST00000257548 ZNF649Q9BS31 505 aa11.3□□□□□ -0.6
USP30-201ENST00000257548 SELENOIQ9C0D9 397 aa11.3□□□□□ -0.6
USP30-201ENST00000257548 SLC25A32Q9H2D1 315 aa11.3□□□□□ -0.6
USP30-201ENST00000257548 INPP5EQ9NRR6 644 aa11.3□□□□□ -0.6
USP30-201ENST00000257548 ZFP57Q9NU63 452 aa11.3□□□□□ -0.6
USP30-201ENST00000257548 PURGQ9UJV8 347 aaKnown RBP11.3□□□□□ -0.6
USP30-201ENST00000257548 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.3□□□□□ -0.6
USP30-201ENST00000257548 TNFSF12O43508 249 aa11.3□□□□□ -0.6
USP30-201ENST00000257548 GPANK1O95872 356 aa11.3□□□□□ -0.6
USP30-201ENST00000257548 PVRP15151 417 aa11.3□□□□□ -0.6
USP30-201ENST00000257548 MGMTP16455 207 aa11.3□□□□□ -0.6
USP30-201ENST00000257548 PCBP4P57723 403 aaKnown RBP11.3□□□□□ -0.6
USP30-201ENST00000257548 TSC22D1Q15714 1073 aa11.3□□□□□ -0.6
USP30-201ENST00000257548 ARMC6Q6NXE6 501 aa11.3□□□□□ -0.6
USP30-201ENST00000257548 RBMS3Q6XE24 437 aaKnown RBP11.3□□□□□ -0.6
USP30-201ENST00000257548 OVCH2Q7RTZ1 564 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms