RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 RNH1P13489 461 aaKnown RBP6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 HOXA6P31267 233 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 WNT5AP41221 380 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 BLKP51451 505 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 WNT4P56705 351 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 CDHR3Q6ZTQ4 885 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 NXPE1Q8N323 547 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 B3GNT7Q8NFL0 401 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 OR4B1Q8NGF8 309 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 OR1E3Q8WZA6 343 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 SHISA4Q96DD7 197 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 OR10C1Q96KK4 312 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 DUSP21Q9H596 190 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 METTL7AQ9H8H3 244 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 AKTIPQ9H8T0 292 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 DMAC2Q9NW81 257 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 LRIT1Q9P2V4 623 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 PAM16Q9Y3D7 125 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 BCORQ6W2J9 1755 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 FAM171A2A8MVW0 826 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 F5H5T6 163 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 TAAR5O14804 337 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 C1SP09871 688 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 NID1P14543 1247 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 NPY1RP25929 384 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 OR3A2P47893 321 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 STK19P49842 368 aaPredicted RBP6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 SLC5A12Q1EHB4 618 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 ALG10Q5BKT4 473 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 ALG10BQ5I7T1 473 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 CPNE8Q86YQ8 564 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 DUSP19Q8WTR2 217 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 HGDQ93099 445 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 ERGIC1Q969X5 290 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 SLC46A1Q96NT5 459 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 F2RL3Q96RI0 385 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 SNX10Q9Y5X0 201 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 XIRP1Q702N8 1843 aaKnown RBP6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 TLX2O43763 284 aaPredicted RBP6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 DUSP11O75319 330 aaKnown RBP6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 NFYBP25208 207 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 Q5BKY6 102 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 RPL22L1Q6P5R6 122 aaKnown RBP6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 Q6ZRG5 221 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 STXBP6Q8NFX7 210 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 SCGB1C1Q8TD33 95 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 CD200R1Q8TD46 325 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 TIMP4Q99727 224 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 NPDC1Q9NQX5 325 aaPredicted RBP6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 OR5V1Q9UGF6 321 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 ARAP2Q8WZ64 1704 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 CLDN34H7C241 214 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 HOXA11P31270 313 aaPredicted RBP6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 GDNFP39905 211 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 NPBWR1P48145 328 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 AGFG1P52594 562 aaKnown RBP6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 MANFP55145 182 aaKnown RBP6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 SNAI3Q3KNW1 292 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 RFTN2Q52LD8 501 aaPredicted RBP6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 RTL6Q6ICC9 239 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 KIAA1211LQ6NV74 962 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 CXCL17Q6UXB2 119 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 DLK2Q6UY11 383 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 LIMS2Q7Z4I7 341 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 CEACAM19Q7Z692 300 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 RTN4RL2Q86UN3 420 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 GLCCI1Q86VQ1 547 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 IL22RA2Q969J5 263 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 PDZD7Q9H5P4 517 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 AKIRIN1Q9H9L7 192 aaPredicted RBP6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 POPDC2Q9HBU9 364 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 KCNMB2Q9Y691 235 aa6.25□□□□□ -1.41
PDGFRA-201ENST00000257290 LAMB2P55268 1798 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 TNFSF12O43508 249 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 PRICKLE3O43900 615 aaPredicted RBP6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 ESR1P03372 595 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 MELTFP08582 738 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 PRR35P0CG20 571 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 IRF1P10914 325 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 CORO1AP31146 461 aaKnown RBP6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 HTR5AP47898 357 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 ABHD18Q0P651 414 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 NHLRC3Q5JS37 347 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 LRRC73Q5JTD7 316 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 NIPAL3Q6P499 406 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 YAF2Q8IY57 180 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 DND1Q8IYX4 353 aaKnown RBP6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 NETO2Q8NC67 525 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 OR6N1Q8NGY5 312 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 GNPDA2Q8TDQ7 276 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 SARGQ9BW04 601 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 RAB22AQ9UL26 194 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 MAP4K5Q9Y4K4 846 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 A6NNC1 897 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 PAGE1O75459 146 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 ELK1P19419 428 aa6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 EFNA1P20827 205 aaPredicted RBP6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 HINT1P49773 126 aaPredicted RBP6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 RNF144AP50876 292 aaPredicted RBP6.24□□□□□ -1.41
PDGFRA-201ENST00000257290 EPHB3P54753 998 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms