RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 SPDEFO95238 335 aa17.45■□□□□ 0.38
PTPRE-201ENST00000254667 CPT2P23786 658 aa17.45■□□□□ 0.38
PTPRE-201ENST00000254667 FCRL6Q6DN72 434 aa17.45■□□□□ 0.38
PTPRE-201ENST00000254667 COMMD7Q86VX2 200 aa17.45■□□□□ 0.38
PTPRE-201ENST00000254667 CHST8Q9H2A9 424 aa17.45■□□□□ 0.38
PTPRE-201ENST00000254667 LRFN1Q9P244 771 aa17.45■□□□□ 0.38
PTPRE-201ENST00000254667 IDSB3KWA1 339 aa17.45■□□□□ 0.38
PTPRE-201ENST00000254667 TMPRSS11DO60235 418 aa17.45■□□□□ 0.38
PTPRE-201ENST00000254667 PIPP12273 146 aaPredicted RBP17.45■□□□□ 0.38
PTPRE-201ENST00000254667 RAP2BP61225 183 aa17.45■□□□□ 0.38
PTPRE-201ENST00000254667 SLC35A4Q96G79 324 aa17.45■□□□□ 0.38
PTPRE-201ENST00000254667 PCED1AQ9H1Q7 454 aa17.45■□□□□ 0.38
PTPRE-201ENST00000254667 CHRNA9Q9UGM1 479 aa17.45■□□□□ 0.38
PTPRE-201ENST00000254667 A6NIN4 97 aa17.45■□□□□ 0.38
PTPRE-201ENST00000254667 DSCR3O14972 297 aa17.45■□□□□ 0.38
PTPRE-201ENST00000254667 TMEM196Q5HYL7 178 aa17.45■□□□□ 0.38
PTPRE-201ENST00000254667 AGBL4Q5VU57 503 aa17.45■□□□□ 0.38
PTPRE-201ENST00000254667 S100A7AQ86SG5 101 aa17.45■□□□□ 0.38
PTPRE-201ENST00000254667 DEFB123Q8N688 67 aa17.45■□□□□ 0.38
PTPRE-201ENST00000254667 OR6M1Q8NGM8 313 aa17.45■□□□□ 0.38
PTPRE-201ENST00000254667 RPL3LQ92901 407 aaKnown RBP17.45■□□□□ 0.38
PTPRE-201ENST00000254667 CNTNAP3BQ96NU0 1288 aa17.45■□□□□ 0.38
PTPRE-201ENST00000254667 SNX18Q96RF0 628 aa17.45■□□□□ 0.38
PTPRE-201ENST00000254667 OCSTAMPQ9BR26 566 aa17.45■□□□□ 0.38
PTPRE-201ENST00000254667 STEAP1Q9UHE8 339 aa17.45■□□□□ 0.38
PTPRE-201ENST00000254667 C2orf72A6NCS6 295 aa17.45■□□□□ 0.38
PTPRE-201ENST00000254667 SURF4O15260 269 aa17.45■□□□□ 0.38
PTPRE-201ENST00000254667 FGF17O60258 216 aa17.45■□□□□ 0.38
PTPRE-201ENST00000254667 NCR1O76036 304 aa17.45■□□□□ 0.38
PTPRE-201ENST00000254667 IKZF1Q13422 519 aa17.45■□□□□ 0.38
PTPRE-201ENST00000254667 EMC4Q5J8M3 183 aa17.45■□□□□ 0.38
PTPRE-201ENST00000254667 CA13Q8N1Q1 262 aa17.45■□□□□ 0.38
PTPRE-201ENST00000254667 LGALS14Q8TCE9 139 aa17.45■□□□□ 0.38
PTPRE-201ENST00000254667 ASF1BQ9NVP2 202 aa17.45■□□□□ 0.38
PTPRE-201ENST00000254667 OR52A1Q9UKL2 312 aa17.45■□□□□ 0.38
PTPRE-201ENST00000254667 PIP5K1CO60331 668 aa17.44■□□□□ 0.38
PTPRE-201ENST00000254667 IFNA10P01566 189 aa17.44■□□□□ 0.38
PTPRE-201ENST00000254667 ELP2Q6IA86 826 aa17.44■□□□□ 0.38
PTPRE-201ENST00000254667 PM20D2Q8IYS1 436 aa17.44■□□□□ 0.38
PTPRE-201ENST00000254667 MAML2Q8IZL2 1156 aaPredicted RBP17.44■□□□□ 0.38
PTPRE-201ENST00000254667 BCORP1Q8N888 145 aa17.44■□□□□ 0.38
PTPRE-201ENST00000254667 ZNF486Q96H40 463 aaPredicted RBP17.44■□□□□ 0.38
PTPRE-201ENST00000254667 THOC3Q96J01 351 aaKnown RBP17.44■□□□□ 0.38
PTPRE-201ENST00000254667 ELF4Q99607 663 aaPredicted RBP17.44■□□□□ 0.38
PTPRE-201ENST00000254667 LAT2Q9GZY6 243 aa17.44■□□□□ 0.38
PTPRE-201ENST00000254667 TRAPPC2LQ9UL33 140 aa17.44■□□□□ 0.38
PTPRE-201ENST00000254667 ST6GAL1P15907 406 aa17.44■□□□□ 0.38
PTPRE-201ENST00000254667 JUNBP17275 347 aaPredicted RBP17.44■□□□□ 0.38
PTPRE-201ENST00000254667 CCL11P51671 97 aa17.44■□□□□ 0.38
PTPRE-201ENST00000254667 LCN10Q6JVE6 187 aa17.44■□□□□ 0.38
PTPRE-201ENST00000254667 USP54Q70EL1 1684 aa17.44■□□□□ 0.38
PTPRE-201ENST00000254667 GLB1P16278 677 aa17.44■□□□□ 0.38
PTPRE-201ENST00000254667 NKX2-5P52952 324 aaPredicted RBP17.44■□□□□ 0.38
PTPRE-201ENST00000254667 RELAQ04206 551 aa17.44■□□□□ 0.38
PTPRE-201ENST00000254667 IL10RAQ13651 578 aa17.44■□□□□ 0.38
PTPRE-201ENST00000254667 B3GLCTQ6Y288 498 aa17.44■□□□□ 0.38
PTPRE-201ENST00000254667 MYEOVQ96EZ4 313 aa17.44■□□□□ 0.38
PTPRE-201ENST00000254667 NKX3-1Q99801 234 aaPredicted RBP17.44■□□□□ 0.38
PTPRE-201ENST00000254667 NRSN2Q9GZP1 204 aa17.44■□□□□ 0.38
PTPRE-201ENST00000254667 MKRN2Q9H000 416 aaKnown RBP17.44■□□□□ 0.38
PTPRE-201ENST00000254667 BCL2L10Q9HD36 194 aa17.44■□□□□ 0.38
PTPRE-201ENST00000254667 SLC22A23A1A5C7 686 aa17.44■□□□□ 0.38
PTPRE-201ENST00000254667 H7C1Q1 480 aa17.44■□□□□ 0.38
PTPRE-201ENST00000254667 KCNK2O95069 426 aa17.44■□□□□ 0.38
PTPRE-201ENST00000254667 CEACAM5P06731 702 aa17.44■□□□□ 0.38
PTPRE-201ENST00000254667 MSR1P21757 451 aa17.44■□□□□ 0.38
PTPRE-201ENST00000254667 PTPN6P29350 595 aa17.44■□□□□ 0.38
PTPRE-201ENST00000254667 SHC1P29353 583 aa17.44■□□□□ 0.38
PTPRE-201ENST00000254667 SLC14A1Q13336 389 aa17.44■□□□□ 0.38
PTPRE-201ENST00000254667 APH1AQ96BI3 265 aa17.44■□□□□ 0.38
PTPRE-201ENST00000254667 TMEM82A0PJX8 343 aa17.43■□□□□ 0.38
PTPRE-201ENST00000254667 P2RY10O00398 339 aa17.43■□□□□ 0.38
PTPRE-201ENST00000254667 CTSLP07711 333 aa17.43■□□□□ 0.38
PTPRE-201ENST00000254667 ETV5P41161 510 aa17.43■□□□□ 0.38
PTPRE-201ENST00000254667 SRPXP78539 464 aa17.43■□□□□ 0.38
PTPRE-201ENST00000254667 FAM53BQ14153 422 aa17.43■□□□□ 0.38
PTPRE-201ENST00000254667 IHHQ14623 411 aa17.43■□□□□ 0.38
PTPRE-201ENST00000254667 ZNF585AQ6P3V2 769 aa17.43■□□□□ 0.38
PTPRE-201ENST00000254667 LINC00346Q8IVM7 164 aa17.43■□□□□ 0.38
PTPRE-201ENST00000254667 ZNF679Q8IYX0 411 aa17.43■□□□□ 0.38
PTPRE-201ENST00000254667 ZNF511Q8NB15 262 aa17.43■□□□□ 0.38
PTPRE-201ENST00000254667 STK35Q8TDR2 534 aa17.43■□□□□ 0.38
PTPRE-201ENST00000254667 GABARAPL1Q9H0R8 117 aa17.43■□□□□ 0.38
PTPRE-201ENST00000254667 TATDN3Q17R31 274 aa17.43■□□□□ 0.38
PTPRE-201ENST00000254667 STT3BQ8TCJ2 826 aa17.43■□□□□ 0.38
PTPRE-201ENST00000254667 RASD2Q96D21 266 aa17.43■□□□□ 0.38
PTPRE-201ENST00000254667 NAA50Q9GZZ1 169 aaKnown RBP17.43■□□□□ 0.38
PTPRE-201ENST00000254667 ACER3Q9NUN7 267 aa17.43■□□□□ 0.38
PTPRE-201ENST00000254667 SLC17A4Q9Y2C5 497 aa17.43■□□□□ 0.38
PTPRE-201ENST00000254667 GABARAPO95166 117 aa17.43■□□□□ 0.38
PTPRE-201ENST00000254667 NAGAP17050 411 aa17.43■□□□□ 0.38
PTPRE-201ENST00000254667 TEKQ02763 1124 aa17.43■□□□□ 0.38
PTPRE-201ENST00000254667 OR4N2Q8NGD1 307 aa17.43■□□□□ 0.38
PTPRE-201ENST00000254667 SGK3Q96BR1 496 aa17.43■□□□□ 0.38
PTPRE-201ENST00000254667 TMEM129A0AVI4 362 aa17.43■□□□□ 0.38
PTPRE-201ENST00000254667 OTOL1A6NHN0 477 aaPredicted RBP17.43■□□□□ 0.38
PTPRE-201ENST00000254667 PAPLNO95428 1278 aa17.43■□□□□ 0.38
PTPRE-201ENST00000254667 PSMB1P20618 241 aaKnown RBP17.43■□□□□ 0.38
PTPRE-201ENST00000254667 PRPH2P23942 346 aa17.43■□□□□ 0.38
PTPRE-201ENST00000254667 BSGP35613 385 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms