RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 OR8D2Q9GZM6 311 aa10.93□□□□□ -0.66
USHBP1-201ENST00000252597 ZNF350Q9GZX5 532 aa10.93□□□□□ -0.66
USHBP1-201ENST00000252597 COMMD4Q9H0A8 199 aa10.93□□□□□ -0.66
USHBP1-201ENST00000252597 PNO1Q9NRX1 252 aaKnown RBP10.93□□□□□ -0.66
USHBP1-201ENST00000252597 ASF1BQ9NVP2 202 aa10.93□□□□□ -0.66
USHBP1-201ENST00000252597 C5orf51A6NDU8 294 aa10.93□□□□□ -0.66
USHBP1-201ENST00000252597 AIPO00170 330 aa10.93□□□□□ -0.66
USHBP1-201ENST00000252597 AGPAT2O15120 278 aa10.93□□□□□ -0.66
USHBP1-201ENST00000252597 GNALP38405 381 aa10.93□□□□□ -0.66
USHBP1-201ENST00000252597 PBX2P40425 430 aa10.93□□□□□ -0.66
USHBP1-201ENST00000252597 CDKN2AP42771 156 aaKnown RBP10.93□□□□□ -0.66
USHBP1-201ENST00000252597 POU3F4P49335 361 aa10.93□□□□□ -0.66
USHBP1-201ENST00000252597 RAP2BP61225 183 aa10.93□□□□□ -0.66
USHBP1-201ENST00000252597 ACSM1Q08AH1 577 aa10.93□□□□□ -0.66
USHBP1-201ENST00000252597 RIN1Q13671 783 aa10.93□□□□□ -0.66
USHBP1-201ENST00000252597 PRAMEF17Q5VTA0 474 aa10.93□□□□□ -0.66
USHBP1-201ENST00000252597 OLFML2AQ68BL7 652 aa10.93□□□□□ -0.66
USHBP1-201ENST00000252597 FAM109BQ6ICB4 259 aaPredicted RBP10.93□□□□□ -0.66
USHBP1-201ENST00000252597 PWWP2BQ6NUJ5 590 aa10.93□□□□□ -0.66
USHBP1-201ENST00000252597 GLDNQ6ZMI3 551 aaPredicted RBP10.93□□□□□ -0.66
USHBP1-201ENST00000252597 ZNF227Q86WZ6 799 aa10.93□□□□□ -0.66
USHBP1-201ENST00000252597 OR4S1Q8NGB4 309 aa10.93□□□□□ -0.66
USHBP1-201ENST00000252597 TTC9Q92623 222 aa10.93□□□□□ -0.66
USHBP1-201ENST00000252597 ZNF75AQ96N20 296 aa10.93□□□□□ -0.66
USHBP1-201ENST00000252597 SLC6A7Q99884 636 aa10.93□□□□□ -0.66
USHBP1-201ENST00000252597 RPP25Q9BUL9 199 aaKnown RBP10.93□□□□□ -0.66
USHBP1-201ENST00000252597 ACTR10Q9NZ32 417 aa10.93□□□□□ -0.66
USHBP1-201ENST00000252597 MLXQ9UH92 298 aa10.93□□□□□ -0.66
USHBP1-201ENST00000252597 PCDHGA9Q9Y5G4 932 aaKnown RBP10.93□□□□□ -0.66
USHBP1-201ENST00000252597 PRRC2CQ9Y520 2896 aaKnown RBP10.93□□□□□ -0.66
USHBP1-201ENST00000252597 MPDZO75970 2070 aa10.93□□□□□ -0.66
USHBP1-201ENST00000252597 SLC22A23A1A5C7 686 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 PRSS38A1L453 326 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 SOX1O00570 391 aaPredicted RBP10.92□□□□□ -0.66
USHBP1-201ENST00000252597 PPM1BO75688 479 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 OPN1LWP04000 364 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 HOXD4P09016 255 aaPredicted RBP10.92□□□□□ -0.66
USHBP1-201ENST00000252597 IFNGR1P15260 489 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 AKR1C4P17516 323 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 BDH1Q02338 343 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 ZNF169Q14929 603 aaPredicted RBP10.92□□□□□ -0.66
USHBP1-201ENST00000252597 OR7A5Q15622 319 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 MEP1BQ16820 701 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 ALG10Q5BKT4 473 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 RAB12Q6IQ22 244 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 FAM122CQ6P4D5 195 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 TMPRSS9Q7Z410 1059 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 MDGA2Q7Z553 956 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 OR2L13Q8N349 312 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 SDR16C5Q8N3Y7 309 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 ACBD4Q8NC06 268 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 C10orf90Q96M02 699 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 FAM83CQ9BQN1 747 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 ZNF768Q9H5H4 540 aaKnown RBP10.92□□□□□ -0.66
USHBP1-201ENST00000252597 C19orf53Q9UNZ5 99 aaPredicted RBP10.92□□□□□ -0.66
USHBP1-201ENST00000252597 FOXJ3Q9UPW0 622 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 RP1P56715 2156 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 SC5DO75845 299 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 RPS21P63220 83 aaKnown RBP10.92□□□□□ -0.66
USHBP1-201ENST00000252597 MC2RQ01718 297 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 RUNX3Q13761 415 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 TMPRSS11FQ6ZWK6 438 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 GALNTL5Q7Z4T8 443 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 PXKQ7Z7A4 578 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 TAF8Q7Z7C8 310 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 RNF113BQ8IZP6 322 aaKnown RBP10.92□□□□□ -0.66
USHBP1-201ENST00000252597 ZFP82Q8N141 532 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 OR6V1Q8N148 313 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 RCBTB1Q8NDN9 531 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 LRRC46Q96FV0 321 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 MRPL48Q96GC5 212 aaKnown RBP10.92□□□□□ -0.66
USHBP1-201ENST00000252597 RADILQ96JH8 1075 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 MOGAT1Q96PD6 335 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 SERINC2Q96SA4 455 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 ZFYVE21Q9BQ24 234 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 OR2AT4A6NND4 320 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 B4DGG1 531 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 DISC1C4P0D8 188 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 F12P00748 615 aaPredicted RBP10.92□□□□□ -0.66
USHBP1-201ENST00000252597 APODP05090 189 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 PRSS3P35030 304 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 TPMTP51580 245 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 RPS11P62280 158 aaKnown RBP eCLIP10.92□□□□□ -0.66
USHBP1-201ENST00000252597 ADAM8P78325 824 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 EIF2B1Q14232 305 aaKnown RBP10.92□□□□□ -0.66
USHBP1-201ENST00000252597 RPL13AP3Q6NVV1 102 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 CBLN3Q6UW01 205 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 MARCH3Q86UD3 253 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 ARMC10Q8N2F6 343 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 SPPL3Q8TCT6 385 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 TSNAXQ99598 290 aaKnown RBP10.92□□□□□ -0.66
USHBP1-201ENST00000252597 TINAGL1Q9GZM7 467 aaPredicted RBP10.92□□□□□ -0.66
USHBP1-201ENST00000252597 POFUT1Q9H488 388 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 INPP5EQ9NRR6 644 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 SOHLH2Q9NX45 425 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 KCNMB2Q9Y691 235 aa10.92□□□□□ -0.66
USHBP1-201ENST00000252597 RP1L1Q8IWN7 2480 aaPredicted RBP10.92□□□□□ -0.66
USHBP1-201ENST00000252597 FAM74A7A6NL05 159 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 J3QRE1 110 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 RAB3DO95716 219 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms