RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 SIGIRRQ6IA17 410 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 OR10K2Q6IF99 312 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 STEAP1BQ6NZ63 245 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 SSX6Q7RTT6 188 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 STX12Q86Y82 276 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 ZNF547Q8IVP9 402 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 OR2A1Q8NGT9 310 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 ZBTB8AQ96BR9 441 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 ZNF775Q96BV0 537 aaPredicted RBP4.24□□□□□ -1.73
VPS13C-201ENST00000249837 PELOQ9BRX2 385 aaKnown RBP4.24□□□□□ -1.73
VPS13C-201ENST00000249837 EVA1BQ9NVM1 165 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 CHP2O43745 196 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 CXCL10P02778 98 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 PGCP20142 388 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 MAOAP21397 527 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 RAB2AP61019 212 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 SLC22A6Q4U2R8 563 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 HACD4Q5VWC8 232 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 GPR139Q6DWJ6 353 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 UBE3DQ7Z6J8 389 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 PLPP6Q8IY26 295 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 ZNF565Q8N9K5 539 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 OR10K1Q8NGX5 313 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 ELP5Q8TE02 316 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 ST8SIA4Q92187 359 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 TBX21Q9UL17 535 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 TOR1AO14656 332 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 SUSD5O60279 629 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 AGTR1P30556 359 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 NUDT1P36639 197 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 BCL2A1Q16548 175 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 MPEG1Q2M385 716 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 RNF165Q6ZSG1 346 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 SLC16A9Q7RTY1 509 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 GKN2Q86XP6 184 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 FAM3CQ92520 227 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 WDR34Q96EX3 536 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 SLC41A2Q96JW4 573 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 MED18Q9BUE0 208 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 PTDSS2Q9BVG9 487 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 SERTAD3Q9UJW9 196 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 RPH3AQ9Y2J0 694 aaPredicted RBP4.24□□□□□ -1.73
VPS13C-201ENST00000249837 SERINC4A6NH21 518 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 ZNF208O43345 1280 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 SLC6A8P48029 635 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 FGL1Q08830 312 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 NFATC4Q14934 902 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 MEP1BQ16820 701 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 LIPNQ5VXI9 398 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 LILRA6Q6PI73 481 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 UPRTQ96BW1 309 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 FGGYQ96C11 551 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 A0A0B4J2A0 478 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 KRBOX1C9JBD0 128 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 PER3P56645 1201 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 BTG2P78543 158 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 YIF1BQ5BJH7 314 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 AWAT2Q6E213 333 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 PM20D2Q8IYS1 436 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 HOXB13Q92826 284 aaPredicted RBP4.23□□□□□ -1.73
VPS13C-201ENST00000249837 MRGPRX3Q96LB0 322 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 WDFY2Q96P53 400 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 TPSD1Q9BZJ3 242 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 C6orf106Q9H6K1 298 aaPredicted RBP4.23□□□□□ -1.73
VPS13C-201ENST00000249837 DUSP22Q9NRW4 184 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 SHPKQ9UHJ6 478 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 LOC285556D6RIA3 1793 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 LANCL1O43813 399 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 GCM2O75603 506 aaPredicted RBP4.23□□□□□ -1.73
VPS13C-201ENST00000249837 PPP3CBP16298 524 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 TACR3P29371 465 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 RABIFP47224 123 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 TAS2R19P59542 299 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 TOR2AQ5JU69 321 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 TMEM225Q6GV28 225 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 MCEMP1Q8IX19 187 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 POFUT1Q9H488 388 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 ACOXLQ9NUZ1 547 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 ZNF701Q9NV72 531 aaPredicted RBP4.23□□□□□ -1.73
VPS13C-201ENST00000249837 TAS2R4Q9NYW5 299 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 ZNF346Q9UL40 294 aaKnown RBP4.23□□□□□ -1.73
VPS13C-201ENST00000249837 LSM5Q9Y4Y9 91 aaKnown RBP4.23□□□□□ -1.73
VPS13C-201ENST00000249837 SOD1P00441 154 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 PMP2P02689 132 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 WNT1P04628 370 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 C21orf58P58505 322 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 MEF2DQ14814 521 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 PPA1Q15181 289 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 CORO6Q6QEF8 472 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 PXKQ7Z7A4 578 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 PLPP7Q8NBV4 271 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 OR4D9Q8NGE8 314 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 OR51D1Q8NGF3 324 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 SLC5A7Q9GZV3 580 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 HRH4Q9H3N8 390 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 ANKRD19PQ9H560 264 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 STEAP1Q9UHE8 339 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 CA14Q9ULX7 337 aa4.23□□□□□ -1.73
VPS13C-201ENST00000249837 SIRT4Q9Y6E7 314 aaPredicted RBP4.23□□□□□ -1.73
VPS13C-201ENST00000249837 CDC42EP2O14613 210 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms