RNA–Protein interactions for RNA: ENST00000246868.6

SBDS-201, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SBDS, Length 1,631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-201ENST00000246868 MED29Q9NX70 200 aa17.11■□□□□ 0.33
SBDS-201ENST00000246868 SCN3BQ9NY72 215 aa17.11■□□□□ 0.33
SBDS-201ENST00000246868 KLHL9Q9P2J3 617 aa17.11■□□□□ 0.33
SBDS-201ENST00000246868 ZNF175Q9Y473 711 aa17.11■□□□□ 0.33
SBDS-201ENST00000246868 ALPK2Q86TB3 2170 aa17.11■□□□□ 0.33
SBDS-201ENST00000246868 SLC22A20A6NK97 555 aa17.1■□□□□ 0.33
SBDS-201ENST00000246868 FAM183AA6NL82 134 aa17.1■□□□□ 0.33
SBDS-201ENST00000246868 ZNF726A6NNF4 738 aa17.1■□□□□ 0.33
SBDS-201ENST00000246868 CLCA1A8K7I4 914 aa17.1■□□□□ 0.33
SBDS-201ENST00000246868 ENTPD6O75354 484 aa17.1■□□□□ 0.33
SBDS-201ENST00000246868 PTGS2P35354 604 aa17.1■□□□□ 0.33
SBDS-201ENST00000246868 BIDP55957 195 aa17.1■□□□□ 0.33
SBDS-201ENST00000246868 RNPS1Q15287 305 aaKnown RBP17.1■□□□□ 0.33
SBDS-201ENST00000246868 NXNL2Q5VZ03 156 aa17.1■□□□□ 0.33
SBDS-201ENST00000246868 CREB3L2Q70SY1 520 aa17.1■□□□□ 0.33
SBDS-201ENST00000246868 GID4Q8IVV7 300 aa17.1■□□□□ 0.33
SBDS-201ENST00000246868 MCEMP1Q8IX19 187 aa17.1■□□□□ 0.33
SBDS-201ENST00000246868 NPEPL1Q8NDH3 523 aa17.1■□□□□ 0.33
SBDS-201ENST00000246868 OR5M9Q8NGP3 310 aa17.1■□□□□ 0.33
SBDS-201ENST00000246868 FNDC9Q8TBE3 224 aa17.1■□□□□ 0.33
SBDS-201ENST00000246868 RNF128Q8TEB7 428 aa17.1■□□□□ 0.33
SBDS-201ENST00000246868 WBP1Q96G27 269 aa17.1■□□□□ 0.33
SBDS-201ENST00000246868 ADAD1Q96M93 576 aaKnown RBP17.1■□□□□ 0.33
SBDS-201ENST00000246868 ZNF582Q96NG8 517 aaPredicted RBP17.1■□□□□ 0.33
SBDS-201ENST00000246868 BSNQ9UPA5 3926 aa17.1■□□□□ 0.33
SBDS-201ENST00000246868 ITPR1Q14643 2758 aa17.1■□□□□ 0.33
SBDS-201ENST00000246868 GTF3C1Q12789 2109 aa17.1■□□□□ 0.33
SBDS-201ENST00000246868 AHRRA9YTQ3 701 aa17.1■□□□□ 0.33
SBDS-201ENST00000246868 KDM4EB2RXH2 506 aaPredicted RBP17.1■□□□□ 0.33
SBDS-201ENST00000246868 GPR171O14626 319 aa17.1■□□□□ 0.33
SBDS-201ENST00000246868 PRODHO43272 600 aa17.1■□□□□ 0.33
SBDS-201ENST00000246868 CCDC159P0C7I6 412 aa17.1■□□□□ 0.33
SBDS-201ENST00000246868 CDKN2AP42771 156 aaKnown RBP17.1■□□□□ 0.33
SBDS-201ENST00000246868 SLC16A1P53985 500 aa17.1■□□□□ 0.33
SBDS-201ENST00000246868 CLDN17P56750 224 aa17.1■□□□□ 0.33
SBDS-201ENST00000246868 LY6DQ14210 128 aa17.1■□□□□ 0.33
SBDS-201ENST00000246868 ST3GAL2Q16842 350 aa17.1■□□□□ 0.33
SBDS-201ENST00000246868 P4HA3Q7Z4N8 544 aa17.1■□□□□ 0.33
SBDS-201ENST00000246868 TXNDC15Q96J42 360 aa17.1■□□□□ 0.33
SBDS-201ENST00000246868 SNX18Q96RF0 628 aa17.1■□□□□ 0.33
SBDS-201ENST00000246868 EMC3Q9P0I2 261 aa17.1■□□□□ 0.33
SBDS-201ENST00000246868 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.1■□□□□ 0.33
SBDS-201ENST00000246868 PRSS37A4D1T9 235 aa17.09■□□□□ 0.33
SBDS-201ENST00000246868 TTLL8A6PVC2 850 aa17.09■□□□□ 0.33
SBDS-201ENST00000246868 SLC1A7O00341 560 aa17.09■□□□□ 0.33
SBDS-201ENST00000246868 FAM20BO75063 409 aa17.09■□□□□ 0.33
SBDS-201ENST00000246868 SMNDC1O75940 238 aaKnown RBP eCLIP17.09■□□□□ 0.33
SBDS-201ENST00000246868 IGHG1P01857 330 aa17.09■□□□□ 0.33
SBDS-201ENST00000246868 RPSAP08865 295 aaKnown RBP17.09■□□□□ 0.33
SBDS-201ENST00000246868 LGALS3BPQ08380 585 aa17.09■□□□□ 0.33
SBDS-201ENST00000246868 SMN1Q16637 294 aaKnown RBP17.09■□□□□ 0.33
SBDS-201ENST00000246868 AADACL4Q5VUY2 407 aa17.09■□□□□ 0.33
SBDS-201ENST00000246868 NHLRC1Q6VVB1 395 aa17.09■□□□□ 0.33
SBDS-201ENST00000246868 OR6X1Q8NH79 312 aa17.09■□□□□ 0.33
SBDS-201ENST00000246868 ABHD3Q8WU67 409 aa17.09■□□□□ 0.33
SBDS-201ENST00000246868 ZNF566Q969W8 418 aa17.09■□□□□ 0.33
SBDS-201ENST00000246868 SLC25A44Q96H78 314 aaPredicted RBP17.09■□□□□ 0.33
SBDS-201ENST00000246868 SLX1AQ9BQ83 275 aa17.09■□□□□ 0.33
SBDS-201ENST00000246868 TPRKBQ9Y3C4 175 aa17.09■□□□□ 0.33
SBDS-201ENST00000246868 RPL36Q9Y3U8 105 aaKnown RBP17.09■□□□□ 0.33
SBDS-201ENST00000246868 SLC35F4A4IF30 521 aa17.08■□□□□ 0.32
SBDS-201ENST00000246868 OR6C68A6NDL8 312 aa17.08■□□□□ 0.32
SBDS-201ENST00000246868 ZNF716A6NP11 495 aa17.08■□□□□ 0.32
SBDS-201ENST00000246868 AHCYL1O43865 530 aa17.08■□□□□ 0.32
SBDS-201ENST00000246868 ABOP16442 354 aa17.08■□□□□ 0.32
SBDS-201ENST00000246868 TDGF1P3P51864 188 aa17.08■□□□□ 0.32
SBDS-201ENST00000246868 NUDT6P53370 316 aa17.08■□□□□ 0.32
SBDS-201ENST00000246868 CDH11P55287 796 aa17.08■□□□□ 0.32
SBDS-201ENST00000246868 RPS7P62081 194 aaKnown RBP17.08■□□□□ 0.32
SBDS-201ENST00000246868 KLHL12Q53G59 568 aa17.08■□□□□ 0.32
SBDS-201ENST00000246868 LAIR2Q6ISS4 152 aa17.08■□□□□ 0.32
SBDS-201ENST00000246868 BCDIN3DQ7Z5W3 292 aaKnown RBP17.08■□□□□ 0.32
SBDS-201ENST00000246868 PTP4A1Q93096 173 aa17.08■□□□□ 0.32
SBDS-201ENST00000246868 EMC6Q9BV81 110 aa17.08■□□□□ 0.32
SBDS-201ENST00000246868 OR51V1Q9H2C8 321 aa17.08■□□□□ 0.32
SBDS-201ENST00000246868 MED20Q9H944 212 aa17.08■□□□□ 0.32
SBDS-201ENST00000246868 RPRD1BQ9NQG5 326 aaKnown RBP17.08■□□□□ 0.32
SBDS-201ENST00000246868 PLCXD1Q9NUJ7 323 aa17.08■□□□□ 0.32
SBDS-201ENST00000246868 ASF1BQ9NVP2 202 aa17.08■□□□□ 0.32
SBDS-201ENST00000246868 FLVCR1Q9Y5Y0 555 aa17.08■□□□□ 0.32
SBDS-201ENST00000246868 IGKV3D-15A0A087WSY6 115 aa17.07■□□□□ 0.32
SBDS-201ENST00000246868 H7C1C5 153 aa17.07■□□□□ 0.32
SBDS-201ENST00000246868 XPNPEP2O43895 674 aa17.07■□□□□ 0.32
SBDS-201ENST00000246868 AQP8O94778 261 aa17.07■□□□□ 0.32
SBDS-201ENST00000246868 TPOP07202 933 aa17.07■□□□□ 0.32
SBDS-201ENST00000246868 NR2C1P13056 603 aa17.07■□□□□ 0.32
SBDS-201ENST00000246868 GABRA1P14867 456 aa17.07■□□□□ 0.32
SBDS-201ENST00000246868 CRHBPP24387 322 aa17.07■□□□□ 0.32
SBDS-201ENST00000246868 ATRXP46100 2492 aa17.07■□□□□ 0.32
SBDS-201ENST00000246868 SLC25A1P53007 311 aa17.07■□□□□ 0.32
SBDS-201ENST00000246868 CLRN1P58418 232 aa17.07■□□□□ 0.32
SBDS-201ENST00000246868 LCN6P62502 163 aa17.07■□□□□ 0.32
SBDS-201ENST00000246868 KCTD21Q4G0X4 260 aa17.07■□□□□ 0.32
SBDS-201ENST00000246868 ZNF585AQ6P3V2 769 aa17.07■□□□□ 0.32
SBDS-201ENST00000246868 NIPAL3Q6P499 406 aa17.07■□□□□ 0.32
SBDS-201ENST00000246868 GFRALQ6UXV0 394 aa17.07■□□□□ 0.32
SBDS-201ENST00000246868 MEPCEQ7L2J0 689 aaKnown RBP17.07■□□□□ 0.32
SBDS-201ENST00000246868 ZNF540Q8NDQ6 660 aa17.07■□□□□ 0.32
SBDS-201ENST00000246868 BBS1Q8NFJ9 593 aa17.07■□□□□ 0.32
SBDS-201ENST00000246868 OR9Q1Q8NGQ5 310 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 983.9 ms