RNA–Protein interactions for RNA: ENST00000243103.3

HOXC12-201, Transcript of homeobox C12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC12, Length 3,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12-201ENST00000243103 ZNF674Q2M3X9 581 aa13.77□□□□□ -0.21
HOXC12-201ENST00000243103 MEPCEQ7L2J0 689 aaKnown RBP13.77□□□□□ -0.21
HOXC12-201ENST00000243103 GRASPQ7Z6J2 395 aaPredicted RBP13.77□□□□□ -0.21
HOXC12-201ENST00000243103 CD180Q99467 661 aa13.77□□□□□ -0.21
HOXC12-201ENST00000243103 ZNF649Q9BS31 505 aa13.77□□□□□ -0.21
HOXC12-201ENST00000243103 EDN3P14138 238 aa13.76□□□□□ -0.21
HOXC12-201ENST00000243103 SPINT3P49223 89 aa13.76□□□□□ -0.21
HOXC12-201ENST00000243103 ADAM8P78325 824 aa13.76□□□□□ -0.21
HOXC12-201ENST00000243103 ARHGAP40Q5TG30 622 aa13.76□□□□□ -0.21
HOXC12-201ENST00000243103 GFI1BQ5VTD9 330 aa13.76□□□□□ -0.21
HOXC12-201ENST00000243103 CDCP2Q5VXM1 449 aa13.76□□□□□ -0.21
HOXC12-201ENST00000243103 ALKBH2Q6NS38 261 aa13.76□□□□□ -0.21
HOXC12-201ENST00000243103 SLC35F3Q8IY50 421 aa13.76□□□□□ -0.21
HOXC12-201ENST00000243103 MORN4Q8NDC4 146 aa13.76□□□□□ -0.21
HOXC12-201ENST00000243103 SLC41A3Q96GZ6 507 aa13.76□□□□□ -0.21
HOXC12-201ENST00000243103 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.76□□□□□ -0.21
HOXC12-201ENST00000243103 TOLLIPQ9H0E2 274 aa13.76□□□□□ -0.21
HOXC12-201ENST00000243103 RGCCQ9H4X1 137 aa13.76□□□□□ -0.21
HOXC12-201ENST00000243103 RHOFQ9HBH0 211 aa13.76□□□□□ -0.21
HOXC12-201ENST00000243103 SRA1Q9HD15 236 aaKnown RBP13.76□□□□□ -0.21
HOXC12-201ENST00000243103 KCND3Q9UK17 655 aa13.76□□□□□ -0.21
HOXC12-201ENST00000243103 ZMIZ1Q9ULJ6 1067 aa13.76□□□□□ -0.21
HOXC12-201ENST00000243103 CENPVL1A0A0U1RR11 272 aa13.76□□□□□ -0.21
HOXC12-201ENST00000243103 DCDC2BA2VCK2 349 aa13.76□□□□□ -0.21
HOXC12-201ENST00000243103 ZNF208O43345 1280 aa13.76□□□□□ -0.21
HOXC12-201ENST00000243103 NME2P1O60361 137 aa13.76□□□□□ -0.21
HOXC12-201ENST00000243103 SCGB1D2O95969 90 aa13.76□□□□□ -0.21
HOXC12-201ENST00000243103 ADH1AP07327 375 aa13.76□□□□□ -0.21
HOXC12-201ENST00000243103 PRPH2P23942 346 aa13.76□□□□□ -0.21
HOXC12-201ENST00000243103 HSD3B2P26439 372 aa13.76□□□□□ -0.21
HOXC12-201ENST00000243103 MPGP29372 298 aa13.76□□□□□ -0.21
HOXC12-201ENST00000243103 RPS27AP62979 156 aaKnown RBP13.76□□□□□ -0.21
HOXC12-201ENST00000243103 UBA52P62987 128 aaKnown RBP13.76□□□□□ -0.21
HOXC12-201ENST00000243103 SRSF5Q13243 272 aaKnown RBP13.76□□□□□ -0.21
HOXC12-201ENST00000243103 SLC9A3R2Q15599 337 aa13.76□□□□□ -0.21
HOXC12-201ENST00000243103 OR2A2Q6IF42 318 aa13.76□□□□□ -0.21
HOXC12-201ENST00000243103 C1orf94Q6P1W5 598 aa13.76□□□□□ -0.21
HOXC12-201ENST00000243103 ZNF529Q6P280 563 aa13.76□□□□□ -0.21
HOXC12-201ENST00000243103 BHLHE23Q8NDY6 225 aa13.76□□□□□ -0.21
HOXC12-201ENST00000243103 OR10AC1Q8NH08 325 aa13.76□□□□□ -0.21
HOXC12-201ENST00000243103 NECAB3Q96P71 396 aaPredicted RBP13.76□□□□□ -0.21
HOXC12-201ENST00000243103 RBM14Q96PK6 669 aaKnown RBP13.76□□□□□ -0.21
HOXC12-201ENST00000243103 GAREM1Q9H706 876 aa13.76□□□□□ -0.21
HOXC12-201ENST00000243103 FREM2Q5SZK8 3169 aa13.76□□□□□ -0.21
HOXC12-201ENST00000243103 OR52A4PA6NMU1 304 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 ALOX12BO75342 701 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 RCC1P18754 421 aaPredicted RBP13.75□□□□□ -0.21
HOXC12-201ENST00000243103 TSPAN31Q12999 210 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 GAMTQ14353 236 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 IRF4Q15306 451 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 GRHL2Q6ISB3 625 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 HIST2H3AQ71DI3 136 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 KCNRGQ8N5I3 272 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 PLPP7Q8NBV4 271 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 TSEN15Q8WW01 171 aaKnown RBP13.75□□□□□ -0.21
HOXC12-201ENST00000243103 PRRC1Q96M27 445 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 TPSD1Q9BZJ3 242 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 SDHAF3Q9NRP4 125 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 EPHA6Q9UF33 1036 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 PISDQ9UG56 409 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 FBXO7Q9Y3I1 522 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 WDR45Q9Y484 360 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 KLF2Q9Y5W3 355 aaPredicted RBP13.75□□□□□ -0.21
HOXC12-201ENST00000243103 TMEM82A0PJX8 343 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 PQLC2LA1A4F0 135 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 TCAPO15273 167 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 RAB3DO95716 219 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 SFTPBP07988 381 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 FAUP35544 74 aaKnown RBP13.75□□□□□ -0.21
HOXC12-201ENST00000243103 SMAD4Q13485 552 aaKnown RBP13.75□□□□□ -0.21
HOXC12-201ENST00000243103 CDNFQ49AH0 187 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 ZDHHC12Q96GR4 267 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 RAB33BQ9H082 229 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 RSPH9Q9H1X1 276 aaPredicted RBP13.75□□□□□ -0.21
HOXC12-201ENST00000243103 IGFLR1Q9H665 355 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 GGT3PA6NGU5 568 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 GABARAPH6UMI1 98 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 PLPP1O14494 284 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 TMPRSS11DO60235 418 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 OR10H2O60403 315 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 NDUFB6O95139 128 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 PRH1P02810 166 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 OR4E1P0C645 316 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 MGMTP16455 207 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 VASPP50552 380 aaPredicted RBP13.75□□□□□ -0.21
HOXC12-201ENST00000243103 RIDAP52758 137 aaKnown RBP13.75□□□□□ -0.21
HOXC12-201ENST00000243103 EEF1A1P68104 462 aaKnown RBP13.75□□□□□ -0.21
HOXC12-201ENST00000243103 LTBQ06643 244 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 EEF1A1P5Q5VTE0 462 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 TMEM215Q68D42 235 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 FAM71E1Q6IPT2 247 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 FAM111BQ6SJ93 734 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 SLCO4C1Q6ZQN7 724 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 ZNF676Q8N7Q3 588 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 MARS2Q96GW9 593 aaKnown RBP13.75□□□□□ -0.21
HOXC12-201ENST00000243103 OR5V1Q9UGF6 321 aa13.75□□□□□ -0.21
HOXC12-201ENST00000243103 A0A087X0M5 115 aa13.74□□□□□ -0.21
HOXC12-201ENST00000243103 TRAV14DV4A0A0A6YYC5 116 aa13.74□□□□□ -0.21
HOXC12-201ENST00000243103 A0A1B0GX30 115 aa13.74□□□□□ -0.21
HOXC12-201ENST00000243103 GPANK1O95872 356 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms