RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 DHRS1Q96LJ7 313 aa9.95□□□□□ -0.82
SF3B6-201ENST00000233468 WFIKKN1Q96NZ8 548 aa9.95□□□□□ -0.82
SF3B6-201ENST00000233468 LRMDAQ9H2I8 198 aa9.95□□□□□ -0.82
SF3B6-201ENST00000233468 MOV10Q9HCE1 1003 aaKnown RBP9.95□□□□□ -0.82
SF3B6-201ENST00000233468 MAN2C1Q9NTJ4 1040 aa9.95□□□□□ -0.82
SF3B6-201ENST00000233468 SEC14L4Q9UDX3 406 aa9.95□□□□□ -0.82
SF3B6-201ENST00000233468 HEATR5AQ86XA9 2040 aa9.95□□□□□ -0.82
SF3B6-201ENST00000233468 TCRBV5S2A0A599 114 aa9.94□□□□□ -0.82
SF3B6-201ENST00000233468 DHRS12A0PJE2 317 aa9.94□□□□□ -0.82
SF3B6-201ENST00000233468 A6NNC1 897 aa9.94□□□□□ -0.82
SF3B6-201ENST00000233468 CENPBD1B2RD01 187 aa9.94□□□□□ -0.82
SF3B6-201ENST00000233468 C11orf98E9PRG8 122 aa9.94□□□□□ -0.82
SF3B6-201ENST00000233468 ACOT8O14734 319 aa9.94□□□□□ -0.82
SF3B6-201ENST00000233468 TRAF3IP2O43734 574 aaPredicted RBP9.94□□□□□ -0.82
SF3B6-201ENST00000233468 SERPINI2O75830 405 aa9.94□□□□□ -0.82
SF3B6-201ENST00000233468 CIB2O75838 187 aa9.94□□□□□ -0.82
SF3B6-201ENST00000233468 LYZL6O75951 148 aa9.94□□□□□ -0.82
SF3B6-201ENST00000233468 IGHV3-9P01782 118 aa9.94□□□□□ -0.82
SF3B6-201ENST00000233468 IGHV1-2P23083 117 aa9.94□□□□□ -0.82
SF3B6-201ENST00000233468 RRM2P31350 389 aa9.94□□□□□ -0.82
SF3B6-201ENST00000233468 DNAJA1P31689 397 aaKnown RBP9.94□□□□□ -0.82
SF3B6-201ENST00000233468 MAGEA2P43356 314 aa9.94□□□□□ -0.82
SF3B6-201ENST00000233468 SELENOPP49908 381 aa9.94□□□□□ -0.82
SF3B6-201ENST00000233468 ART1P52961 327 aa9.94□□□□□ -0.82
SF3B6-201ENST00000233468 NR1H2P55055 460 aa9.94□□□□□ -0.82
SF3B6-201ENST00000233468 CBX1P83916 185 aa9.94□□□□□ -0.82
SF3B6-201ENST00000233468 ALG10Q5BKT4 473 aa9.94□□□□□ -0.82
SF3B6-201ENST00000233468 TIMM23BQ5SRD1 257 aa9.94□□□□□ -0.82
SF3B6-201ENST00000233468 TSPO2Q5TGU0 170 aa9.94□□□□□ -0.82
SF3B6-201ENST00000233468 FAM205BPQ63HN1 556 aa9.94□□□□□ -0.82
SF3B6-201ENST00000233468 PODNL1Q6PEZ8 512 aa9.94□□□□□ -0.82
SF3B6-201ENST00000233468 KLHL24Q6TFL4 600 aa9.94□□□□□ -0.82
SF3B6-201ENST00000233468 TREML4Q6UXN2 200 aa9.94□□□□□ -0.82
SF3B6-201ENST00000233468 TMPRSS11FQ6ZWK6 438 aa9.94□□□□□ -0.82
SF3B6-201ENST00000233468 SLC35D2Q76EJ3 337 aa9.94□□□□□ -0.82
SF3B6-201ENST00000233468 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.94□□□□□ -0.82
SF3B6-201ENST00000233468 SPATA24Q86W54 205 aa9.94□□□□□ -0.82
SF3B6-201ENST00000233468 LRRC17Q8N6Y2 441 aa9.94□□□□□ -0.82
SF3B6-201ENST00000233468 ZNF433Q8N7K0 673 aaPredicted RBP9.94□□□□□ -0.82
SF3B6-201ENST00000233468 OR6N1Q8NGY5 312 aa9.94□□□□□ -0.82
SF3B6-201ENST00000233468 OR52J3Q8NH60 311 aa9.94□□□□□ -0.82
SF3B6-201ENST00000233468 OR6X1Q8NH79 312 aa9.94□□□□□ -0.82
SF3B6-201ENST00000233468 S100PBPQ96BU1 408 aa9.94□□□□□ -0.82
SF3B6-201ENST00000233468 ALPK1Q96QP1 1244 aa9.94□□□□□ -0.82
SF3B6-201ENST00000233468 CADM1Q9BY67 442 aaKnown RBP9.94□□□□□ -0.82
SF3B6-201ENST00000233468 LIME1Q9H400 295 aa9.94□□□□□ -0.82
SF3B6-201ENST00000233468 INIPQ9NRY2 104 aa9.94□□□□□ -0.82
SF3B6-201ENST00000233468 SLC7A10Q9NS82 523 aa9.94□□□□□ -0.82
SF3B6-201ENST00000233468 C20orf141Q9NUB4 165 aa9.94□□□□□ -0.82
SF3B6-201ENST00000233468 TAS2R5Q9NYW4 299 aa9.94□□□□□ -0.82
SF3B6-201ENST00000233468 HIF3AQ9Y2N7 669 aa9.94□□□□□ -0.82
SF3B6-201ENST00000233468 MAGED1Q9Y5V3 778 aaPredicted RBP9.94□□□□□ -0.82
SF3B6-201ENST00000233468 PCNX3Q9H6A9 2034 aa9.94□□□□□ -0.82
SF3B6-201ENST00000233468 ABCA4P78363 2273 aa9.93□□□□□ -0.82
SF3B6-201ENST00000233468 SLC35F4A4IF30 521 aa9.93□□□□□ -0.82
SF3B6-201ENST00000233468 NPIPB13A6NJU9 1138 aa9.93□□□□□ -0.82
SF3B6-201ENST00000233468 NPIPB4C9JG80 1138 aa9.93□□□□□ -0.82
SF3B6-201ENST00000233468 RPL36A-HNRNPH2H7BZ11 118 aa9.93□□□□□ -0.82
SF3B6-201ENST00000233468 TNFRSF11BO00300 401 aa9.93□□□□□ -0.82
SF3B6-201ENST00000233468 GNGT2O14610 69 aa9.93□□□□□ -0.82
SF3B6-201ENST00000233468 OR10H3O60404 316 aa9.93□□□□□ -0.82
SF3B6-201ENST00000233468 ZNF432O94892 652 aa9.93□□□□□ -0.82
SF3B6-201ENST00000233468 DIRAS1O95057 198 aa9.93□□□□□ -0.82
SF3B6-201ENST00000233468 WNT11O96014 354 aa9.93□□□□□ -0.82
SF3B6-201ENST00000233468 HPRP00739 348 aa9.93□□□□□ -0.82
SF3B6-201ENST00000233468 IGHG1P01857 330 aa9.93□□□□□ -0.82
SF3B6-201ENST00000233468 IFNGR1P15260 489 aa9.93□□□□□ -0.82
SF3B6-201ENST00000233468 CRYGSP22914 178 aa9.93□□□□□ -0.82
SF3B6-201ENST00000233468 CCKARP32238 428 aa9.93□□□□□ -0.82
SF3B6-201ENST00000233468 NTF4P34130 210 aa9.93□□□□□ -0.82
SF3B6-201ENST00000233468 AQP2P41181 271 aa9.93□□□□□ -0.82
SF3B6-201ENST00000233468 CSNK1A1P48729 337 aa9.93□□□□□ -0.82
SF3B6-201ENST00000233468 RELBQ01201 579 aa9.93□□□□□ -0.82
SF3B6-201ENST00000233468 RPL18Q07020 188 aaKnown RBP9.93□□□□□ -0.82
SF3B6-201ENST00000233468 STK11Q15831 433 aa9.93□□□□□ -0.82
SF3B6-201ENST00000233468 BEX5Q5H9J7 111 aa9.93□□□□□ -0.82
SF3B6-201ENST00000233468 ANKRD34AQ69YU3 496 aa9.93□□□□□ -0.82
SF3B6-201ENST00000233468 TSEN54Q7Z6J9 526 aaKnown RBP9.93□□□□□ -0.82
SF3B6-201ENST00000233468 TMEM200AQ86VY9 491 aa9.93□□□□□ -0.82
SF3B6-201ENST00000233468 CCDC36Q8IYA8 594 aa9.93□□□□□ -0.82
SF3B6-201ENST00000233468 C20orf196Q8IYI0 205 aa9.93□□□□□ -0.82
SF3B6-201ENST00000233468 C10orf67Q8IYJ2 551 aa9.93□□□□□ -0.82
SF3B6-201ENST00000233468 OR4K5Q8NGD3 323 aa9.93□□□□□ -0.82
SF3B6-201ENST00000233468 FNDC8Q8TC99 324 aa9.93□□□□□ -0.82
SF3B6-201ENST00000233468 ZNF566Q969W8 418 aa9.93□□□□□ -0.82
SF3B6-201ENST00000233468 SLC25A44Q96H78 314 aaPredicted RBP9.93□□□□□ -0.82
SF3B6-201ENST00000233468 ZC3HAV1LQ96H79 300 aaKnown RBP9.93□□□□□ -0.82
SF3B6-201ENST00000233468 RSRC1Q96IZ7 334 aaKnown RBP9.93□□□□□ -0.82
SF3B6-201ENST00000233468 MUS81Q96NY9 551 aa9.93□□□□□ -0.82
SF3B6-201ENST00000233468 OR2M2Q96R28 347 aa9.93□□□□□ -0.82
SF3B6-201ENST00000233468 REEP1Q9H902 201 aa9.93□□□□□ -0.82
SF3B6-201ENST00000233468 OBP2BQ9NPH6 170 aa9.93□□□□□ -0.82
SF3B6-201ENST00000233468 POMPQ9Y244 141 aa9.93□□□□□ -0.82
SF3B6-201ENST00000233468 AMDHD2Q9Y303 409 aa9.93□□□□□ -0.82
SF3B6-201ENST00000233468 KIAA1549Q9HCM3 1950 aa9.93□□□□□ -0.82
SF3B6-201ENST00000233468 TRBV4-1A0A0J9YWV2 114 aa9.92□□□□□ -0.82
SF3B6-201ENST00000233468 SH3PXD2BA1X283 911 aa9.92□□□□□ -0.82
SF3B6-201ENST00000233468 A6NIZ1 184 aa9.92□□□□□ -0.82
SF3B6-201ENST00000233468 OR5H1A6NKK0 313 aa9.92□□□□□ -0.82
SF3B6-201ENST00000233468 PDLIM1O00151 329 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms