RNA–Protein interactions for RNA: ENST00000231526.8

TRAPPC13-201, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TRAPPC13, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-201ENST00000231526 RPL13AP3Q6NVV1 102 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 CPEB2Q7Z5Q1 589 aaKnown RBP4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 MARCH3Q86UD3 253 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 ZNF440Q8IYI8 595 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 BMPERQ8N8U9 685 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 BHLHE23Q8NDY6 225 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 ZNF680Q8NEM1 530 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 ELOA3Q8NG57 546 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 OR4Q3Q8NH05 313 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 TMEM163Q8TC26 289 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 FCGR1BQ92637 280 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 C3orf49Q96BT1 292 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 ZNF582Q96NG8 517 aaPredicted RBP4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 INTS14Q96SY0 518 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 PIMREGQ9BSJ6 248 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 IFT27Q9BW83 186 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 RTN4RQ9BZR6 473 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 ENKD1Q9H0I2 346 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 UBQLN3Q9H347 655 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 SLC25A19Q9HC21 320 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 SEPSECSQ9HD40 501 aaKnown RBP4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 PCDHB16Q9NRJ7 776 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 FAM212BQ9NTI7 297 aaPredicted RBP4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 SIGLEC7Q9Y286 467 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 B3GALT1Q9Y5Z6 326 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 ZFHX2Q9C0A1 2572 aaPredicted RBP4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 SPTBN2O15020 2390 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 A0A087WUJ7 227 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 DBX1A6NMT0 343 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 C17orf51A8MQB3 221 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 PRR33A8MZF0 331 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 CDX4O14627 284 aaPredicted RBP4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 SURF4O15260 269 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 TSPAN2O60636 221 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 HCN1O60741 890 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 ALX3O95076 343 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 LYPD3O95274 346 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 SLC2A10O95528 541 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 HMGN1P05114 100 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 CD36P16671 472 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 ZNF182P17025 639 aaPredicted RBP4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 MTNR1AP48039 350 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 SLC16A1P53985 500 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 CLDN6P56747 220 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 FXYD6P3P58550 94 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 MC2RQ01718 297 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 SKP2Q13309 424 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 BTBD16Q32M84 506 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 TMEM201Q5SNT2 666 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 WBP2NLQ6ICG8 309 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 RTL4Q6ZR62 310 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 TMPRSS11FQ6ZWK6 438 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 ZNF554Q86TJ5 538 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 P2RY8Q86VZ1 359 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 SLC15A4Q8N697 577 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 C17orf47Q8NEP4 570 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 C9orf43Q8TAL5 461 aaPredicted RBP4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 FNDC8Q8TC99 324 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 DNAJA3Q96EY1 480 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 TMEM80Q96HE8 168 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 FAM71F1Q96KD3 344 aaPredicted RBP4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 TNFRSF13CQ96RJ3 184 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 DOK1Q99704 481 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 ZNF426Q9BUY5 554 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 METTL7AQ9H8H3 244 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 FBXO8Q9NRD0 319 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 ZNF223Q9UK11 482 aaPredicted RBP4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 NXT1Q9UKK6 140 aaKnown RBP4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 PTRH2Q9Y3E5 179 aaKnown RBP4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 CFAP47Q6ZTR5 3102 aa4.89□□□□□ -1.63
TRAPPC13-201ENST00000231526 BTBD17A6NE02 478 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 OR6C70A6NIJ9 312 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 BLOC1S5-TXNDC5H3BN57 136 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 MYL12BO14950 172 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 OIP5O43482 229 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 BCL10O95999 233 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 BMP4P12644 408 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 MYL12AP19105 171 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 PAICSP22234 425 aaKnown RBP4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 RPL4P36578 427 aaKnown RBP4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 LIPAP38571 399 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 RBM34P42696 430 aaKnown RBP4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 SLC15A1P46059 708 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 CTBP2P56545 445 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 EFNB1P98172 346 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 ZNF117Q03924 483 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 NFATC3Q12968 1075 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 KLHL12Q53G59 568 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 ARMCX4Q5H9R4 360 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 DCAF12Q5T6F0 453 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 FNDC7Q5VTL7 733 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 UBE2UQ5VVX9 321 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 SIGIRRQ6IA17 410 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 SHISA2Q6UWI4 295 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 SHFQ7M4L6 423 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 SLCO6A1Q86UG4 719 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 DMRTC2Q8IXT2 367 aaPredicted RBP4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 LRRC17Q8N6Y2 441 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 CLDN22Q8N7P3 220 aa4.88□□□□□ -1.63
TRAPPC13-201ENST00000231526 FAM71CQ8NEG0 241 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms