RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 HEATR5AQ86XA9 2040 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 LINC01553A4QN01 128 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 OR14I1A6ND48 311 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 RIIAD1A6NNX1 92 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 C1orf196B1AJZ1 125 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 IDSB3KWA1 339 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 CDC123O75794 336 aaPredicted RBP8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 DBIP07108 87 aaKnown RBP8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 EPXP11678 715 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 POU4F2Q12837 409 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 EIPR1Q53HC9 387 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 PABPC1L2AQ5JQF8 200 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 USP53Q70EK8 1073 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 SSX9Q7RTT3 188 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 SFTPA2Q8IWL1 248 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 RNF113BQ8IZP6 322 aaKnown RBP8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 SVBPQ8N300 66 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 OR4N2Q8NGD1 307 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 OR52E2Q8NGJ4 325 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 TSACCQ96A04 125 aaPredicted RBP8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 INTS12Q96CB8 462 aaKnown RBP8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 PELI1Q96FA3 418 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 MRPL48Q96GC5 212 aaKnown RBP8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 DERL3Q96Q80 235 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 ZNF559Q9BR84 538 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 SRMSQ9H3Y6 488 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 TAS2R10Q9NYW0 307 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 C19orf53Q9UNZ5 99 aaPredicted RBP8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 ASCC3Q8N3C0 2202 aaKnown RBP8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 TBC1D3DA0A087WVF3 549 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 TBC1D3IA0A087WXS9 549 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 TBC1D3EA0A087X179 549 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 TBC1D3LB9A6J9 549 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 F5H0A9 414 aaPredicted RBP8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 TBC1D3HP0C7X1 549 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 SMIM10L1P0DMW3 83 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 RPS4Y1P22090 263 aaKnown RBP8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 FCARP24071 287 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 EMDP50402 254 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 RPS15AP62244 130 aaKnown RBP8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 RPS11P62280 158 aaKnown RBP eCLIP8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 PPP2CBP62714 309 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 PPP2CAP67775 309 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 SNTB1Q13884 538 aaKnown RBP8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 Q3ZCU0 254 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 TMEM255AQ5JRV8 349 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 STPG1Q5TH74 334 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 TBC1D3CQ6IPX1 549 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 RTL10Q7L3V2 364 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 HSD17B13Q7Z5P4 300 aaPredicted RBP8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 TPRA1Q86W33 373 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 CDK20Q8IZL9 346 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 TBC1D3Q8IZP1 549 aaPredicted RBP8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 WDSUB1Q8N9V3 476 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 FLVCR1-AS1Q8TAF5 88 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 RXFP4Q8TDU9 374 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 SMIM10Q96HG1 83 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 SEC22AQ96IW7 307 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 PAPOLGQ9BWT3 736 aaKnown RBP8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 SLC25A18Q9H1K4 315 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 STARD5Q9NSY2 213 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 DZANK1Q9NVP4 752 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 NOSIPQ9Y314 301 aaKnown RBP8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 ADAM18Q9Y3Q7 739 aa8.6□□□□□ -1.03
HLA-DOA-201ENST00000229829 OR2AT4A6NND4 320 aa8.59□□□□□ -1.03
HLA-DOA-201ENST00000229829 FADS1O60427 444 aa8.59□□□□□ -1.03
HLA-DOA-201ENST00000229829 AGR2O95994 175 aa8.59□□□□□ -1.03
HLA-DOA-201ENST00000229829 KLK3P07288 261 aaPredicted RBP8.59□□□□□ -1.03
HLA-DOA-201ENST00000229829 NQO2P16083 231 aa8.59□□□□□ -1.03
HLA-DOA-201ENST00000229829 HIST1H1CP16403 213 aaKnown RBP8.59□□□□□ -1.03
HLA-DOA-201ENST00000229829 C5AR1P21730 350 aa8.59□□□□□ -1.03
HLA-DOA-201ENST00000229829 NRG3P56975 720 aa8.59□□□□□ -1.03
HLA-DOA-201ENST00000229829 RAP2BP61225 183 aa8.59□□□□□ -1.03
HLA-DOA-201ENST00000229829 RPS21P63220 83 aaKnown RBP8.59□□□□□ -1.03
HLA-DOA-201ENST00000229829 FABP9Q0Z7S8 132 aa8.59□□□□□ -1.03
HLA-DOA-201ENST00000229829 TGIF1Q15583 401 aa8.59□□□□□ -1.03
HLA-DOA-201ENST00000229829 NDUFAF6Q330K2 333 aa8.59□□□□□ -1.03
HLA-DOA-201ENST00000229829 FCRL6Q6DN72 434 aa8.59□□□□□ -1.03
HLA-DOA-201ENST00000229829 TMEM71Q6P5X7 295 aa8.59□□□□□ -1.03
HLA-DOA-201ENST00000229829 OR52I2Q8NH67 350 aa8.59□□□□□ -1.03
HLA-DOA-201ENST00000229829 OR1E3Q8WZA6 343 aa8.59□□□□□ -1.03
HLA-DOA-201ENST00000229829 KIR3DX1Q9H7L2 352 aa8.59□□□□□ -1.03
HLA-DOA-201ENST00000229829 CERS4Q9HA82 394 aa8.59□□□□□ -1.03
HLA-DOA-201ENST00000229829 A0A1B0GWA3 101 aa8.59□□□□□ -1.03
HLA-DOA-201ENST00000229829 KANTRA0A1W2PQU2 76 aa8.59□□□□□ -1.03
HLA-DOA-201ENST00000229829 PRSS38A1L453 326 aa8.59□□□□□ -1.03
HLA-DOA-201ENST00000229829 C4orf47A7E2U8 309 aa8.59□□□□□ -1.03
HLA-DOA-201ENST00000229829 B3GALT2O43825 422 aa8.59□□□□□ -1.03
HLA-DOA-201ENST00000229829 APEHP13798 732 aaKnown RBP8.59□□□□□ -1.03
HLA-DOA-201ENST00000229829 ZNF3P17036 446 aa8.59□□□□□ -1.03
HLA-DOA-201ENST00000229829 ALKBH1Q13686 389 aaKnown RBP8.59□□□□□ -1.03
HLA-DOA-201ENST00000229829 GLT8D1Q68CQ7 371 aa8.59□□□□□ -1.03
HLA-DOA-201ENST00000229829 ENPP7Q6UWV6 458 aa8.59□□□□□ -1.03
HLA-DOA-201ENST00000229829 OR1S2Q8NGQ3 325 aa8.59□□□□□ -1.03
HLA-DOA-201ENST00000229829 LGALS14Q8TCE9 139 aa8.59□□□□□ -1.03
HLA-DOA-201ENST00000229829 PATE1Q8WXA2 126 aa8.59□□□□□ -1.03
HLA-DOA-201ENST00000229829 TM4SF19Q96DZ7 209 aa8.59□□□□□ -1.03
HLA-DOA-201ENST00000229829 SERINC2Q96SA4 455 aa8.59□□□□□ -1.03
HLA-DOA-201ENST00000229829 ZNF251Q9BRH9 671 aa8.59□□□□□ -1.03
HLA-DOA-201ENST00000229829 PTDSS2Q9BVG9 487 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms