RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 SIRT6Q8N6T7 355 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 C10orf53Q8N6V4 93 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 LRRC17Q8N6Y2 441 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 ADPRHL1Q8NDY3 354 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 BBS1Q8NFJ9 593 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 NLGN4YQ8NFZ3 816 aaPredicted RBP9.63□□□□□ -0.87
CDCA3-201ENST00000229265 OR4K13Q8NH42 304 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 SETD6Q8TBK2 473 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 SLC25A43Q8WUT9 341 aaPredicted RBP9.63□□□□□ -0.87
CDCA3-201ENST00000229265 THAP4Q8WY91 577 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 OTULINQ96BN8 352 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 KTI12Q96EK9 354 aaPredicted RBP9.63□□□□□ -0.87
CDCA3-201ENST00000229265 CMTM3Q96MX0 182 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 TIMP4Q99727 224 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 SLC30A2Q9BRI3 323 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 MRI1Q9BV20 369 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 KATNB1Q9BVA0 655 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 ULBP3Q9BZM4 244 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 TXNIPQ9H3M7 391 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 PTGES2Q9H7Z7 377 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 SP140LQ9H930 580 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 ZNF71Q9NQZ8 489 aaPredicted RBP9.63□□□□□ -0.87
CDCA3-201ENST00000229265 INIPQ9NRY2 104 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 FAIMQ9NVQ4 179 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 GALNT8Q9NY28 637 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 TAS2R5Q9NYW4 299 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 B3GALT5Q9Y2C3 310 aa9.63□□□□□ -0.87
CDCA3-201ENST00000229265 IGHV1-45A0A0A0MS14 117 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 TRAV1-2A0A0B4J238 106 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 TRBV11-1A0A0K0K1C0 115 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 CDC14CA4D256 554 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 FAM47E-STBD1D6RA91 191 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 OIP5O43482 229 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 SUSD5O60279 629 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 KLF7O75840 302 aaPredicted RBP9.62□□□□□ -0.87
CDCA3-201ENST00000229265 UPK1BO75841 260 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 SC5DO75845 299 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 ARL6IP5O75915 188 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 RGS9O75916 674 aaPredicted RBP9.62□□□□□ -0.87
CDCA3-201ENST00000229265 ZNF432O94892 652 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 CDRT1O95170 752 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 BMP4P12644 408 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 PRKCAP17252 672 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 CRABP1P29762 137 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 DLSTP36957 453 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 AQP2P41181 271 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 CDKN2AP42771 156 aaKnown RBP9.62□□□□□ -0.87
CDCA3-201ENST00000229265 UCNP55089 124 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 RPS3AP61247 264 aaKnown RBP9.62□□□□□ -0.87
CDCA3-201ENST00000229265 RPL27P61353 136 aaKnown RBP9.62□□□□□ -0.87
CDCA3-201ENST00000229265 FABP5Q01469 135 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 ZNF85Q03923 595 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 EGR3Q06889 387 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 RPL18Q07020 188 aaKnown RBP9.62□□□□□ -0.87
CDCA3-201ENST00000229265 C19orf57Q0VDD7 668 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 PCOLCEQ15113 449 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 IGFBP7Q16270 282 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 NDUFAF6Q330K2 333 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 FAM198BQ6UWH4 519 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 UNQ9370/PRO34162Q6UXP9 181 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 DCDC5Q6ZRR9 648 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 H1FNTQ75WM6 255 aaPredicted RBP9.62□□□□□ -0.87
CDCA3-201ENST00000229265 ZBTB46Q86UZ6 589 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 PRR22Q8IZ63 422 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 GATSQ8NAP1 163 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 OR10H4Q8NGA5 316 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 MOSPD2Q8NHP6 518 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 ABHD4Q8TB40 342 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 RPS4Y2Q8TD47 263 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 ASB17Q8WXJ9 295 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 MR1Q95460 341 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 SGCZQ96LD1 299 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 CEP19Q96LK0 163 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 HCAR1Q9BXC0 346 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 GPR87Q9BY21 358 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.62□□□□□ -0.87
CDCA3-201ENST00000229265 VSX1Q9NZR4 365 aaPredicted RBP9.62□□□□□ -0.87
CDCA3-201ENST00000229265 ADAM30Q9UKF2 790 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 ZNF346Q9UL40 294 aaKnown RBP9.62□□□□□ -0.87
CDCA3-201ENST00000229265 MRPS18CQ9Y3D5 142 aaKnown RBP9.62□□□□□ -0.87
CDCA3-201ENST00000229265 NUP210LQ5VU65 1888 aa9.62□□□□□ -0.87
CDCA3-201ENST00000229265 NBASA2RRP1 2371 aa9.61□□□□□ -0.87
CDCA3-201ENST00000229265 SHANK1Q9Y566 2161 aa9.61□□□□□ -0.87
CDCA3-201ENST00000229265 A0A1W2PQL4 384 aaPredicted RBP9.61□□□□□ -0.87
CDCA3-201ENST00000229265 OR6C68A6NDL8 312 aa9.61□□□□□ -0.87
CDCA3-201ENST00000229265 B8ZZF3 427 aa9.61□□□□□ -0.87
CDCA3-201ENST00000229265 PLPP3O14495 311 aa9.61□□□□□ -0.87
CDCA3-201ENST00000229265 XKRYO14609 159 aa9.61□□□□□ -0.87
CDCA3-201ENST00000229265 SLC19A2O60779 497 aa9.61□□□□□ -0.87
CDCA3-201ENST00000229265 TNFSF8P32971 234 aa9.61□□□□□ -0.87
CDCA3-201ENST00000229265 SDC2P34741 201 aa9.61□□□□□ -0.87
CDCA3-201ENST00000229265 CASP3P42574 277 aa9.61□□□□□ -0.87
CDCA3-201ENST00000229265 RANBP1P43487 201 aa9.61□□□□□ -0.87
CDCA3-201ENST00000229265 PSMD7P51665 324 aa9.61□□□□□ -0.87
CDCA3-201ENST00000229265 SLC16A1P53985 500 aa9.61□□□□□ -0.87
CDCA3-201ENST00000229265 DEFA1P59665 94 aa9.61□□□□□ -0.87
CDCA3-201ENST00000229265 DEFA3P59666 94 aa9.61□□□□□ -0.87
CDCA3-201ENST00000229265 PPP3R1P63098 170 aa9.61□□□□□ -0.87
CDCA3-201ENST00000229265 ERVK-25P63136 954 aa9.61□□□□□ -0.87
CDCA3-201ENST00000229265 RIN1Q13671 783 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms