RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 MIA3Q5JRA6 1907 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 SIPA1L1O43166 1804 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 TRIOBPQ9H2D6 2365 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 AGAP14A8MT82 685 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 P2RY10O00398 339 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 ZNF264O43296 627 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 TXNL1O43396 289 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 SRPX2O60687 465 aaPredicted RBP12.62□□□□□ -0.39
NFKB1-201ENST00000226574 GPANK1O95872 356 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 CD3DP04234 171 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 CFIP05156 583 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 MSL3P1P0C860 447 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 SPI1P17947 270 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 TUBG1P23258 451 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 TAS2R20P59543 309 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 NFATC4Q14934 902 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 FXNQ16595 210 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 EOGTQ5NDL2 527 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 SCGB3A2Q96PL1 93 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 ZNF587Q96SQ5 575 aaPredicted RBP12.62□□□□□ -0.39
NFKB1-201ENST00000226574 PITHD1Q9GZP4 211 aaPredicted RBP12.62□□□□□ -0.39
NFKB1-201ENST00000226574 SLC6A20Q9NP91 592 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 PPP4R1LQ9P1A2 415 aa12.62□□□□□ -0.39
NFKB1-201ENST00000226574 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.62□□□□□ -0.39
NFKB1-201ENST00000226574 NCOR1O75376 2440 aa12.61□□□□□ -0.39
NFKB1-201ENST00000226574 VSTM2BA6NLU5 285 aa12.61□□□□□ -0.39
NFKB1-201ENST00000226574 IFITM5A6NNB3 132 aa12.61□□□□□ -0.39
NFKB1-201ENST00000226574 PNMTP11086 282 aa12.61□□□□□ -0.39
NFKB1-201ENST00000226574 PPP3CBP16298 524 aa12.61□□□□□ -0.39
NFKB1-201ENST00000226574 PER3P56645 1201 aa12.61□□□□□ -0.39
NFKB1-201ENST00000226574 NLRC3Q7RTR2 1065 aa12.61□□□□□ -0.39
NFKB1-201ENST00000226574 SENP5Q96HI0 755 aaPredicted RBP12.61□□□□□ -0.39
NFKB1-201ENST00000226574 PRDM7Q9NQW5 492 aa12.61□□□□□ -0.39
NFKB1-201ENST00000226574 DOCK1Q14185 1865 aa12.61□□□□□ -0.39
NFKB1-201ENST00000226574 HSPA12AO43301 675 aa12.61□□□□□ -0.39
NFKB1-201ENST00000226574 SNRNP70P08621 437 aaKnown RBP12.61□□□□□ -0.39
NFKB1-201ENST00000226574 ACHEP22303 614 aa12.61□□□□□ -0.39
NFKB1-201ENST00000226574 S100A2P29034 98 aa12.61□□□□□ -0.39
NFKB1-201ENST00000226574 GNRHRP30968 328 aa12.61□□□□□ -0.39
NFKB1-201ENST00000226574 TAS2R19P59542 299 aa12.61□□□□□ -0.39
NFKB1-201ENST00000226574 SEC61A1P61619 476 aaKnown RBP12.61□□□□□ -0.39
NFKB1-201ENST00000226574 CDK5R1Q15078 307 aa12.61□□□□□ -0.39
NFKB1-201ENST00000226574 WBP2NLQ6ICG8 309 aa12.61□□□□□ -0.39
NFKB1-201ENST00000226574 KIRREL2Q6UWL6 708 aa12.61□□□□□ -0.39
NFKB1-201ENST00000226574 Q6ZTK2 550 aa12.61□□□□□ -0.39
NFKB1-201ENST00000226574 TMUB2Q71RG4 321 aa12.61□□□□□ -0.39
NFKB1-201ENST00000226574 TCTE3Q8IZS6 198 aa12.61□□□□□ -0.39
NFKB1-201ENST00000226574 OR51T1Q8NGJ9 327 aa12.61□□□□□ -0.39
NFKB1-201ENST00000226574 ELP5Q8TE02 316 aa12.61□□□□□ -0.39
NFKB1-201ENST00000226574 SLC37A2Q8TED4 501 aa12.61□□□□□ -0.39
NFKB1-201ENST00000226574 KCNIP3Q9Y2W7 256 aa12.61□□□□□ -0.39
NFKB1-201ENST00000226574 OR5K4A6NMS3 321 aa12.61□□□□□ -0.39
NFKB1-201ENST00000226574 GMDSO60547 372 aa12.61□□□□□ -0.39
NFKB1-201ENST00000226574 CAV2P51636 162 aa12.61□□□□□ -0.39
NFKB1-201ENST00000226574 DYRK1AQ13627 763 aa12.61□□□□□ -0.39
NFKB1-201ENST00000226574 USF2Q15853 346 aaPredicted RBP12.61□□□□□ -0.39
NFKB1-201ENST00000226574 GLYR1Q49A26 553 aaPredicted RBP12.61□□□□□ -0.39
NFKB1-201ENST00000226574 MAMSTRQ6ZN01 415 aa12.61□□□□□ -0.39
NFKB1-201ENST00000226574 TRAPPC6BQ86SZ2 158 aa12.61□□□□□ -0.39
NFKB1-201ENST00000226574 SLC22A8Q8TCC7 542 aa12.61□□□□□ -0.39
NFKB1-201ENST00000226574 ARL11Q969Q4 196 aa12.61□□□□□ -0.39
NFKB1-201ENST00000226574 FOXRED1Q96CU9 486 aaPredicted RBP12.61□□□□□ -0.39
NFKB1-201ENST00000226574 WDR89Q96FK6 387 aaPredicted RBP12.61□□□□□ -0.39
NFKB1-201ENST00000226574 TOE1Q96GM8 510 aaKnown RBP12.61□□□□□ -0.39
NFKB1-201ENST00000226574 OR5B2Q96R09 309 aa12.61□□□□□ -0.39
NFKB1-201ENST00000226574 IGHV3-20A0A0C4DH32 117 aa12.6□□□□□ -0.39
NFKB1-201ENST00000226574 hCG_1807616A0A1W2PRN6 198 aa12.6□□□□□ -0.39
NFKB1-201ENST00000226574 OR8U9P0C7N5 309 aa12.6□□□□□ -0.39
NFKB1-201ENST00000226574 POU3F3P20264 500 aaPredicted RBP12.6□□□□□ -0.39
NFKB1-201ENST00000226574 FBLP22087 321 aaKnown RBP12.6□□□□□ -0.39
NFKB1-201ENST00000226574 GABRR1P24046 479 aa12.6□□□□□ -0.39
NFKB1-201ENST00000226574 HTR2CP28335 458 aa12.6□□□□□ -0.39
NFKB1-201ENST00000226574 S100GP29377 79 aa12.6□□□□□ -0.39
NFKB1-201ENST00000226574 EMDP50402 254 aa12.6□□□□□ -0.39
NFKB1-201ENST00000226574 PPT1P50897 306 aa12.6□□□□□ -0.39
NFKB1-201ENST00000226574 CLDN6P56747 220 aa12.6□□□□□ -0.39
NFKB1-201ENST00000226574 HERV-K104P61576 105 aa12.6□□□□□ -0.39
NFKB1-201ENST00000226574 NHLRC1Q6VVB1 395 aa12.6□□□□□ -0.39
NFKB1-201ENST00000226574 BATF2Q8N1L9 274 aa12.6□□□□□ -0.39
NFKB1-201ENST00000226574 RCBTB1Q8NDN9 531 aa12.6□□□□□ -0.39
NFKB1-201ENST00000226574 OR51Q1Q8NH59 317 aa12.6□□□□□ -0.39
NFKB1-201ENST00000226574 C2CD4CQ8TF44 421 aa12.6□□□□□ -0.39
NFKB1-201ENST00000226574 COL11A2P13942 1736 aaPredicted RBP12.6□□□□□ -0.39
NFKB1-201ENST00000226574 MEGF11A6BM72 1044 aa12.6□□□□□ -0.39
NFKB1-201ENST00000226574 GABARAPH6UMI1 98 aa12.6□□□□□ -0.39
NFKB1-201ENST00000226574 NME2P22392 152 aa12.6□□□□□ -0.39
NFKB1-201ENST00000226574 FGF9P31371 208 aaPredicted RBP12.6□□□□□ -0.39
NFKB1-201ENST00000226574 SLC26A5P58743 744 aa12.6□□□□□ -0.39
NFKB1-201ENST00000226574 MRPS10P82664 201 aaKnown RBP12.6□□□□□ -0.39
NFKB1-201ENST00000226574 GPNMBQ14956 572 aa12.6□□□□□ -0.39
NFKB1-201ENST00000226574 CDKN3Q16667 212 aa12.6□□□□□ -0.39
NFKB1-201ENST00000226574 SFRP5Q5T4F7 317 aa12.6□□□□□ -0.39
NFKB1-201ENST00000226574 MEX3BQ6ZN04 569 aaKnown RBP12.6□□□□□ -0.39
NFKB1-201ENST00000226574 P4HA3Q7Z4N8 544 aa12.6□□□□□ -0.39
NFKB1-201ENST00000226574 OR4C3Q8NH37 302 aa12.6□□□□□ -0.39
NFKB1-201ENST00000226574 FGGYQ96C11 551 aa12.6□□□□□ -0.39
NFKB1-201ENST00000226574 MYADMQ96S97 322 aa12.6□□□□□ -0.39
NFKB1-201ENST00000226574 DEFB126Q9BYW3 111 aa12.6□□□□□ -0.39
NFKB1-201ENST00000226574 OR11A1Q9GZK7 315 aa12.6□□□□□ -0.39
NFKB1-201ENST00000226574 SLC25A19Q9HC21 320 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms