RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 IRF3Q14653 427 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 GLYR1Q49A26 553 aaPredicted RBP10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 SLC6A19Q695T7 634 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 SLC18B1Q6NT16 456 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 FAM111BQ6SJ93 734 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 OR5T3Q8NGG3 340 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 OR5M1Q8NGP8 315 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 PFN4Q8NHR9 129 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 SLC22A8Q8TCC7 542 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 C14orf79Q96F83 325 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 WDR92Q96MX6 357 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 HRASLS2Q9NWW9 162 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 KCMF1Q9P0J7 381 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 COPS7AQ9UBW8 275 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 CACNA1BQ00975 2339 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 MEIKINA0A087WXM9 373 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 OTOL1A6NHN0 477 aaPredicted RBP10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 CDK2AP1O14519 115 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 HTR3BO95264 441 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 WNT1P04628 370 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 PRPH2P23942 346 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 Q499Y3 187 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 AKR1C8PQ5T2L2 129 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 OR7E24Q6IFN5 339 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 RHOUQ7L0Q8 258 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 SPEM1Q8N4L4 309 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 OR2AK2Q8NG84 335 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 OR5H2Q8NGV7 314 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 ELP5Q8TE02 316 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 RNF141Q8WVD5 230 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 TTC9Q92623 222 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 WDR89Q96FK6 387 aaPredicted RBP10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 RBP7Q96R05 134 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 URM1Q9BTM9 101 aaKnown RBP10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 G6PC3Q9BUM1 346 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 NXF2Q9GZY0 626 aaKnown RBP10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 PARPBPQ9NWS1 579 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 REV1Q9UBZ9 1251 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 ZNF175Q9Y473 711 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 DOCK8Q8NF50 2099 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 A0A1B0GUH1 482 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 LRIT2A6NDA9 550 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 H7C1C5 153 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 YY2O15391 372 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 PAPLNO95428 1278 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 HMGA2P52926 109 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 LCN6P62502 163 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 TRA2BP62995 288 aaKnown RBP10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 GRM7Q14831 915 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 LINC00303Q3SY05 128 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 PDSS1Q5T2R2 415 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 GPR139Q6DWJ6 353 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 NIPAL3Q6P499 406 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 GPR32P1Q8NGA4 272 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 LHFPL5Q8TAF8 219 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 SMIM4Q8WVI0 70 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 ALG12Q9BV10 488 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 C6orf106Q9H6K1 298 aaPredicted RBP10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 RPH3AQ9Y2J0 694 aaPredicted RBP10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 ZDHHC11BP0C7U3 371 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 PRPS1P60891 318 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 ARHGAP19Q14CB8 494 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 SFRP5Q5T4F7 317 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 SLC35D2Q76EJ3 337 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 DPPA4Q7L190 304 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 DPY19L4Q7Z388 723 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 RNF113BQ8IZP6 322 aaKnown RBP10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 PLA2G15Q8NCC3 412 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 TMED6Q8WW62 240 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 EID2BQ96D98 161 aa10.62□□□□□ -0.71
DNMT3B-201ENST00000201963 TRBV5-4A0A0C4DH59 114 aa10.61□□□□□ -0.71
DNMT3B-201ENST00000201963 H0Y8X5 98 aa10.61□□□□□ -0.71
DNMT3B-201ENST00000201963 ATP5A1P25705 553 aaKnown RBP10.61□□□□□ -0.71
DNMT3B-201ENST00000201963 CD38P28907 300 aa10.61□□□□□ -0.71
DNMT3B-201ENST00000201963 PRKAR1BP31321 381 aa10.61□□□□□ -0.71
DNMT3B-201ENST00000201963 TAS2R20P59543 309 aa10.61□□□□□ -0.71
DNMT3B-201ENST00000201963 RPS15AP62244 130 aaKnown RBP10.61□□□□□ -0.71
DNMT3B-201ENST00000201963 SPEM2Q0P670 501 aa10.61□□□□□ -0.71
DNMT3B-201ENST00000201963 CDKN3Q16667 212 aa10.61□□□□□ -0.71
DNMT3B-201ENST00000201963 AWAT2Q6E213 333 aa10.61□□□□□ -0.71
DNMT3B-201ENST00000201963 PGAP1Q75T13 922 aa10.61□□□□□ -0.71
DNMT3B-201ENST00000201963 KIAA0907Q7Z7F0 614 aaPredicted RBP10.61□□□□□ -0.71
DNMT3B-201ENST00000201963 ZNF679Q8IYX0 411 aa10.61□□□□□ -0.71
DNMT3B-201ENST00000201963 SIRT6Q8N6T7 355 aa10.61□□□□□ -0.71
DNMT3B-201ENST00000201963 OR14K1Q8NGZ2 314 aa10.61□□□□□ -0.71
DNMT3B-201ENST00000201963 STK35Q8TDR2 534 aa10.61□□□□□ -0.71
DNMT3B-201ENST00000201963 ZNF578Q96N58 590 aaPredicted RBP10.61□□□□□ -0.71
DNMT3B-201ENST00000201963 INTS14Q96SY0 518 aa10.61□□□□□ -0.71
DNMT3B-201ENST00000201963 CDC6Q99741 560 aa10.61□□□□□ -0.71
DNMT3B-201ENST00000201963 SLC25A19Q9HC21 320 aa10.61□□□□□ -0.71
DNMT3B-201ENST00000201963 THAP10Q9P2Z0 257 aaPredicted RBP10.61□□□□□ -0.71
DNMT3B-201ENST00000201963 SURF4O15260 269 aa10.61□□□□□ -0.71
DNMT3B-201ENST00000201963 P2RX6O15547 441 aa10.61□□□□□ -0.71
DNMT3B-201ENST00000201963 SULT1B1O43704 296 aa10.61□□□□□ -0.71
DNMT3B-201ENST00000201963 FZD6O60353 706 aa10.61□□□□□ -0.71
DNMT3B-201ENST00000201963 WISP3O95389 354 aaPredicted RBP10.61□□□□□ -0.71
DNMT3B-201ENST00000201963 IGLV3-27P01718 113 aa10.61□□□□□ -0.71
DNMT3B-201ENST00000201963 JMJD7P0C870 316 aa10.61□□□□□ -0.71
DNMT3B-201ENST00000201963 EPXP11678 715 aa10.61□□□□□ -0.71
DNMT3B-201ENST00000201963 TNFRSF4P43489 277 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms