RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 ATF1P18846 271 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 KIR2DL3P43628 341 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 ACKR1Q16570 336 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 ZNF684Q5T5D7 378 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 LIPNQ5VXI9 398 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 DPY19L4Q7Z388 723 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 CPEB2Q7Z5Q1 589 aaKnown RBP7.47□□□□□ -1.21
VAMP3-201ENST00000054666 ADGRG3Q86Y34 549 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 EID2Q8N6I1 236 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 SLC38A9Q8NBW4 561 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 NFAM1Q8NET5 270 aaPredicted RBP7.47□□□□□ -1.21
VAMP3-201ENST00000054666 OR8K3Q8NH51 312 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 IFI44Q8TCB0 444 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 SLC22A8Q8TCC7 542 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 THEM6Q8WUY1 208 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 NSMAFQ92636 917 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 THRSPQ92748 146 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 KCNJ15Q99712 375 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 TXNIPQ9H3M7 391 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 CCDC86Q9H6F5 360 aaKnown RBP7.47□□□□□ -1.21
VAMP3-201ENST00000054666 TCF7L1Q9HCS4 588 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 FSCN3Q9NQT6 498 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 TAS2R5Q9NYW4 299 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 RABL2AQ9UBK7 228 aaPredicted RBP7.47□□□□□ -1.21
VAMP3-201ENST00000054666 CLEC4AQ9UMR7 237 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 RABL2BQ9UNT1 228 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 KLHDC2Q9Y2U9 406 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 AK6Q9Y3D8 172 aaKnown RBP7.47□□□□□ -1.21
VAMP3-201ENST00000054666 U3KQA8 63 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 ASCC3Q8N3C0 2202 aaKnown RBP7.47□□□□□ -1.21
VAMP3-201ENST00000054666 HMX3A6NHT5 357 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 CENPXA8MT69 81 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 DCTN6O00399 190 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 EEF1E1O43324 174 aaKnown RBP7.47□□□□□ -1.21
VAMP3-201ENST00000054666 ORC5O43913 435 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 ATP6V1G1O75348 118 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 AKR7A3O95154 331 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 ZFPL1O95159 310 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 UBL3O95164 117 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 IGHMP01871 453 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 CYC1P08574 325 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 SNRPBP14678 240 aaKnown RBP7.47□□□□□ -1.21
VAMP3-201ENST00000054666 NAGAP17050 411 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 SRMP19623 302 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 DDOSTP39656 456 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 ZNF41P51814 821 aaPredicted RBP7.47□□□□□ -1.21
VAMP3-201ENST00000054666 NANOS3P60323 173 aaKnown RBP7.47□□□□□ -1.21
VAMP3-201ENST00000054666 RASGEF1BQ0VAM2 473 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 TBRG1Q3YBR2 411 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 Q499Y3 187 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 CEP78Q5JTW2 689 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 UBE2NLQ5JXB2 153 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 C1QL3Q5VWW1 255 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 UNQ9370/PRO34162Q6UXP9 181 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 C16orf47Q6ZP98 133 aaPredicted RBP7.47□□□□□ -1.21
VAMP3-201ENST00000054666 ZNF433Q8N7K0 673 aaPredicted RBP7.47□□□□□ -1.21
VAMP3-201ENST00000054666 ZNF676Q8N7Q3 588 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 OR6S1Q8NH40 331 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 ZNF417Q8TAU3 575 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 LGALS14Q8TCE9 139 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 ASB17Q8WXJ9 295 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 TTC9Q92623 222 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 PMEPA1Q969W9 287 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 DDIT4LQ96D03 193 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 NXPE2Q96DL1 559 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 DERL3Q96Q80 235 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 GFM1Q96RP9 751 aaKnown RBP7.47□□□□□ -1.21
VAMP3-201ENST00000054666 ZNF587Q96SQ5 575 aaPredicted RBP7.47□□□□□ -1.21
VAMP3-201ENST00000054666 THAP7Q9BT49 309 aaPredicted RBP7.47□□□□□ -1.21
VAMP3-201ENST00000054666 MRI1Q9BV20 369 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 OR11A1Q9GZK7 315 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 SLC25A18Q9H1K4 315 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 PRMT8Q9NR22 394 aaPredicted RBP7.47□□□□□ -1.21
VAMP3-201ENST00000054666 MRPL39Q9NYK5 338 aaKnown RBP7.47□□□□□ -1.21
VAMP3-201ENST00000054666 PPP4R1LQ9P1A2 415 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 NLKQ9UBE8 527 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 MRM2Q9UI43 246 aaKnown RBP7.47□□□□□ -1.21
VAMP3-201ENST00000054666 SPATA2Q9UM82 520 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 PPIEQ9UNP9 301 aaKnown RBP7.47□□□□□ -1.21
VAMP3-201ENST00000054666 TNRC6BQ9UPQ9 1833 aaKnown RBP7.47□□□□□ -1.21
VAMP3-201ENST00000054666 EXPH5Q8NEV8 1989 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 A6NIZ1 184 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 VSTM2BA6NLU5 285 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 TMEM212A6NML5 194 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 PRR32B1ATL7 298 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 NPIPA5E9PKD4 350 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 AIPO00170 330 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 UPK3AO75631 287 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 ZFAND5O76080 213 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 DXOO77932 396 aaKnown RBP7.46□□□□□ -1.22
VAMP3-201ENST00000054666 CER1O95813 267 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 ABHD16AO95870 558 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 ALOX5APP20292 161 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 CRABP1P29762 137 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 APOBEC1P41238 236 aaKnown RBP7.46□□□□□ -1.22
VAMP3-201ENST00000054666 DAP3P51398 398 aaKnown RBP7.46□□□□□ -1.22
VAMP3-201ENST00000054666 CLDN20P56880 219 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 RAP1BP61224 184 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 RAP1AP62834 184 aa7.46□□□□□ -1.22
VAMP3-201ENST00000054666 PUDPQ08623 228 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms