RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 ADRA2CP18825 462 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 ZNF10P21506 573 aaPredicted RBP9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 RPS27P42677 84 aaKnown RBP9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 H2BFSP57053 126 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 SSTP61278 116 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 DHODHQ02127 395 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 SIGLEC14Q08ET2 396 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 ILF3Q12906 894 aaKnown RBP eCLIP9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 PRICKLE4Q2TBC4 344 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 TBC1D3CQ6IPX1 549 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 ENPP7Q6UWV6 458 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 DGAT2L6Q6ZPD8 337 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 RNF44Q7L0R7 432 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 ABHD13Q7L211 337 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 HIST3H2AQ7L7L0 130 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 FAM220AQ7Z4H9 259 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 JAZF1Q86VZ6 243 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 TBC1D3Q8IZP1 549 aaPredicted RBP9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 OR8S1Q8NH09 359 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 SPPL3Q8TCT6 385 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 HIST1H2ACQ93077 130 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 ZNF285Q96NJ3 590 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 MYADMQ96S97 322 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 ALG12Q9BV10 488 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 ESRP2Q9H6T0 727 aaKnown RBP9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 MED11Q9P086 117 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 KLF2Q9Y5W3 355 aaPredicted RBP9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 SNRPGP15A8MWD9 76 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 OR2A4O95047 310 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 IL5P05113 134 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 RNF224P0DH78 156 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 TSPAN7P41732 249 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 ACTR1BP42025 376 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 SEC13P55735 322 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 ACTR1AP61163 376 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 LTBQ06643 244 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 GGTLC2Q14390 218 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 KCNAB1Q14722 419 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 GSG1LQ6UXU4 331 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 TFAP2EQ6VUC0 442 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 SLC16A13Q7RTY0 426 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 GLB1L2Q8IW92 636 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 DND1Q8IYX4 353 aaKnown RBP9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 EID2Q8N6I1 236 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 CAMKVQ8NCB2 501 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 OR4C16Q8NGL9 310 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 PHYHIPQ92561 330 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 MIB2Q96AX9 1013 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 OR2A7Q96R45 310 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 NKX3-1Q99801 234 aaPredicted RBP9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 GAL3ST1Q99999 423 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 LDAHQ9H6V9 325 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 SRA1Q9HD15 236 aaKnown RBP9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 RXFP3Q9NSD7 469 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 COA4Q9NYJ1 87 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 OPN4Q9UHM6 478 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 FBXL3Q9UKT7 428 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 HEBP2Q9Y5Z4 205 aa9.6□□□□□ -0.87
CX3CL1-201ENST00000006053 SPEGQ15772 3267 aa9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 WDR87Q6ZQQ6 2873 aa9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 TVP23AA6NH52 213 aa9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 KRBOX1C9JBD0 128 aa9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 F5H5P2 479 aa9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 H0YGG7 62 aa9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 AK1P00568 194 aa9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 FBXO45P0C2W1 286 aa9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 SMIM10L1P0DMW3 83 aa9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 GABRA1P14867 456 aa9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 PPP3CBP16298 524 aa9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 MNX1P50219 401 aaPredicted RBP9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 PGDP52209 483 aa9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 ARF3P61204 181 aaPredicted RBP9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 GUCA2AQ02747 115 aa9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 GK2Q14410 553 aaPredicted RBP9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 DCAF12L2Q5VW00 463 aa9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 LIPNQ5VXI9 398 aa9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 OR7E24Q6IFN5 339 aa9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 ULK3Q6PHR2 472 aa9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 ZNF454Q8N9F8 522 aa9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 RELL2Q8NC24 303 aaPredicted RBP9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 OR5AK2Q8NH90 309 aa9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 DVL3Q92997 716 aaPredicted RBP9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 RERGQ96A58 199 aaPredicted RBP9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 SMIM10Q96HG1 83 aa9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 OR2M4Q96R27 311 aa9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 DMRTA2Q96SC8 542 aa9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 ERVK-19Q9WJR5 959 aa9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 A0A087WV62 115 aa9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 TIMP1P01033 207 aa9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 IGKV1D-16P01601 117 aa9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 FAUP35544 74 aaKnown RBP9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 RBM34P42696 430 aaKnown RBP9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 RPS21P63220 83 aaKnown RBP9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 MRPS10P82664 201 aaKnown RBP9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 SORDQ00796 357 aa9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 ETFDHQ16134 617 aa9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 Q499Y3 187 aa9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 GATSQ8NAP1 163 aa9.59□□□□□ -0.87
CX3CL1-201ENST00000006053 TSACCQ96A04 125 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms